ome.xml.model

Interface OMEModelObject

All Known Implementing Classes:

AbstractOMEModelObject, AffineTransform, Annotation, AnnotationRef, Arc, BasicAnnotation, BinaryFile, BinaryOnly, BinData, BooleanAnnotation, Channel, ChannelRef, CommentAnnotation, Dataset, DatasetRef, Detector, DetectorSettings, Dichroic, DichroicRef, DoubleAnnotation, Ellipse, EmissionFilterRef, ExcitationFilterRef, Experiment, Experimenter, ExperimenterGroup, ExperimenterGroupRef, ExperimenterRef, ExperimentRef, External, Filament, FileAnnotation, Filter, FilterRef, FilterSet, FilterSetRef, GenericExcitationSource, Image, ImageRef, ImagingEnvironment, Instrument, InstrumentRef, Label, Laser, Leader, LightEmittingDiode, LightPath, LightSource, LightSourceSettings, Line, ListAnnotation, LongAnnotation, ManufacturerSpec, Map, MapAnnotation, MapPairs, Mask, MetadataOnly, MicrobeamManipulation, MicrobeamManipulationRef, Microscope, ModuloAnnotation, NumericAnnotation, Objective, ObjectiveSettings, OME, OMEXMLMetadataRoot, OriginalMetadataAnnotation, Pixels, Plane, Plate, PlateAcquisition, PlateRef, Point, Polygon, Polyline, Project, ProjectRef, Pump, Reagent, ReagentRef, Rectangle, Reference, Rights, ROI, ROIRef, Screen, Settings, Shape, StageLabel, StructuredAnnotations, TagAnnotation, TermAnnotation, TextAnnotation, TiffData, TimestampAnnotation, TransmittanceRange, TypeAnnotation, Union, UUID, Well, WellSample, WellSampleRef, XMLAnnotation

public interface OMEModelObject

Author:

callan

Method Summary

Methods

Modifier and Type	Method and Description
Element	asXMLElement(Document document) Takes the entire object hierarchy and produces an XML DOM tree.
boolean	link(Reference reference, OMEModelObject o) Link a given OME model object to this model object.
void	update(Element element, OMEModel model) Updates the object hierarchy recursively from an XML DOM tree.

Method Detail

asXMLElement

Element asXMLElement(Document document)

Takes the entire object hierarchy and produces an XML DOM tree.

Parameters:

document - Destination document for element creation, etc.

Returns:

XML DOM tree root element for this model object.

update

void update(Element element,
          OMEModel model)
            throws EnumerationException

Updates the object hierarchy recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.

Parameters:

element - Root of the XML DOM tree to construct a model object graph from.

model - Handler for the OME model which keeps track of instances and references seen during object population.

Throws:

EnumerationException - If there is an error instantiating an enumeration during model object creation.

link

boolean link(Reference reference,
           OMEModelObject o)

Link a given OME model object to this model object.

Parameters:

reference - The type qualifier for the reference. This should be the corresponding reference type for o. If, for example, o is of type Image, reference MUST be of type ImageRef.

o - Model object to link to.

Returns:

true if this model object was able to handle the reference, false otherwise.