loci.formats

Interface ICompressedTileReader

All Known Subinterfaces:

IFormatReader

All Known Implementing Classes:

AFIReader, AIMReader, AliconaReader, AmiraReader, AnalyzeReader, APLReader, APNGReader, ARFReader, AVIReader, BaseTiffReader, BaseZeissReader, BDReader, BDVReader, BIFormatReader, BioRadGelReader, BioRadReader, BioRadSCNReader, BMPReader, BrukerReader, BufferedImageReader, BurleighReader, CanonRawReader, CellH5Reader, CellomicsReader, CellSensReader, CellVoyagerReader, CellWorxReader, ChannelFiller, ChannelMerger, ChannelSeparator, ColumbusReader, CV7000Reader, DelegateReader, DeltavisionReader, DicomReader, DimensionSwapper, DNGReader, Ecat7Reader, EPSReader, FakeReader, FEIReader, FEITiffReader, FilePatternReader, FileStitcher, FitsReader, FlexReader, FlowSightReader, FluoviewReader, FormatReader, FujiReader, FV1000Reader, GatanDM2Reader, GatanReader, GelReader, GIFReader, HamamatsuVMSReader, HISReader, HitachiReader, HRDGDFReader, I2IReader, ICSReader, IM3Reader, ImaconReader, ImageIOReader, ImageProcessorReader, ImageReader, ImagicReader, ImarisHDFReader, ImarisReader, ImarisTiffReader, IMODReader, ImprovisionTiffReader, ImspectorReader, InCell3000Reader, InCellReader, INRReader, InveonReader, IonpathMIBITiffReader, IPLabReader, IPWReader, IvisionReader, JEOLReader, JPEG2000Reader, JPEGReader, JPEGReader.DefaultJPEGReader, JPKReader, JPXReader, KhorosReader, KLBReader, KodakReader, L2DReader, LeicaReader, LeicaSCNReader, LEOReader, LiFlimReader, LIFReader, LIMReader, LMSFileReader, LOFReader, Memoizer, MetamorphReader, MetamorphTiffReader, MetaxpressTiffReader, MIASReader, MicroCTReader, MicromanagerReader, MikroscanTiffReader, MINCReader, MinimalTiffReader, MinMaxCalculator, MNGReader, MolecularImagingReader, MRCReader, MRWReader, MultipleImagesReader, NAFReader, ND2Reader, NDPIReader, NDPISReader, NiftiReader, NikonElementsTiffReader, NikonReader, NikonTiffReader, NRRDReader, OBFReader, OIRReader, OlympusTileReader, OMETiffReader, OMEXMLReader, OpenlabRawReader, OpenlabReader, OperettaReader, OxfordInstrumentsReader, PCIReader, PCORAWReader, PCXReader, PDSReader, PerkinElmerReader, PGMReader, PhotoshopTiffReader, PictReader, PovrayReader, PQBinReader, PrairieReader, PSDReader, PyramidTiffReader, QTReader, QuesantReader, RCPNLReader, ReaderWrapper, RHKReader, SBIGReader, ScanrReader, SDTReader, SeikoReader, SEQReader, SIFReader, SimplePCITiffReader, SISReader, SlideBook7Reader, SlidebookReader, SlidebookTiffReader, SMCameraReader, SPCReader, SPEReader, SpiderReader, SubResolutionFormatReader, SVSReader, TargaReader, TCSReader, TecanReader, TextReader, TiffDelegateReader, TiffJAIReader, TiffReader, TileJPEGReader, TileStitcher, TillVisionReader, TopometrixReader, TrestleReader, UBMReader, UnisokuReader, VarianFDFReader, VectraReader, VeecoReader, VentanaReader, VGSAMReader, VirtualReader, VisitechReader, VolocityClippingReader, VolocityReader, WATOPReader, WrappedReader, XLEFReader, ZeissCZIReader, ZeissLMSReader, ZeissLSMReader, ZeissTIFFReader, ZeissZVIReader, ZipReader

public interface ICompressedTileReader

Interface for reading pre-compressed image tiles.

Method Summary

Modifier and Type	Method and Description
default Codec	getTileCodec(int no) Retrieve a codec that can be used to decompress compressed tiles.
default CodecOptions	getTileCodecOptions(int no, int x, int y) Retrieve codec options that can be used to decompressed the specified tile.
default int	getTileColumns(int no) Get the number of columns of tiles in the specified plane in the current series.
default int	getTileRows(int no) Get the number of rows of tiles in the specified plane in the current series.
default byte[]	openCompressedBytes(int no, byte[] buf, int x, int y) Retrieve the specified tile without performing any decompression.
default byte[]	openCompressedBytes(int no, int x, int y) Retrieve the specified tile without performing any decompression.

Method Detail

getTileRows

default int getTileRows(int no)

Get the number of rows of tiles in the specified plane in the current series.

Parameters:

no - plane index

Returns:

tile row count

getTileColumns

default int getTileColumns(int no)

Get the number of columns of tiles in the specified plane in the current series.

Parameters:

no - plane index

Returns:

tile column count

openCompressedBytes

default byte[] openCompressedBytes(int no,
                                   int x,
                                   int y)
                            throws FormatException,
                                   java.io.IOException

Retrieve the specified tile without performing any decompression.

Parameters:

no - plane index

x - tile X index (indexed from 0, @see getTileColumns(int))

y - tile Y index (indexed frmo 0, @see getTileRows(int))

Returns:

compressed tile bytes

Throws:

FormatException

java.io.IOException

openCompressedBytes

default byte[] openCompressedBytes(int no,
                                   byte[] buf,
                                   int x,
                                   int y)
                            throws FormatException,
                                   java.io.IOException

Retrieve the specified tile without performing any decompression.

Parameters:

no - plane index

buf - pre-allocated buffer in which to store compressed bytes

x - tile X index (indexed from 0, @see getTileColumns(int))

y - tile Y index (indexed frmo 0, @see getTileRows(int))

Returns:

compressed tile bytes

Throws:

FormatException

java.io.IOException

getTileCodec

default Codec getTileCodec(int no)
                    throws FormatException,
                           java.io.IOException

Retrieve a codec that can be used to decompress compressed tiles.

Parameters:

no - plane index

Returns:

codec that can be used for compressed tiles in the specified plane

Throws:

FormatException

java.io.IOException

See Also:

openCompressedBytes(int, int, int)

getTileCodecOptions

default CodecOptions getTileCodecOptions(int no,
                                         int x,
                                         int y)
                                  throws FormatException,
                                         java.io.IOException

Retrieve codec options that can be used to decompressed the specified tile.

Parameters:

no - plane index

x - tile X index (indexed from 0, @see getTileColumns(int))

y - tile Y index (indexed frmo 0, @see getTileRows(int))

Returns:

codec options

Throws:

FormatException

java.io.IOException

See Also:

getTileCodec(int)