loci.formats.in

Class SlideBook7Reader.DataLoader

java.lang.Object

loci.formats.in.SlideBook7Reader.DataLoader

Enclosing class:

SlideBook7Reader

class SlideBook7Reader.DataLoader
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
static int	kMaxNumberOpenFiles
java.util.ArrayList<SlideBook7Reader.CImageGroup>	mCImageGroupList
(package private) java.util.TreeMap<java.lang.Integer,java.lang.String>	mCounterToPathMap
int	mCurrentFileCounter
java.lang.String	mErrorMessage
SlideBook7Reader.CSBFile70	mFile
(package private) java.util.HashMap<java.lang.String,loci.common.RandomAccessInputStream>	mPathToStreamMap
java.lang.String	mSlidePath
SlideBook7Reader.CSlideRecord70	mSlideRecord

Constructor Summary

Constructors

Constructor and Description
DataLoader(java.lang.String inSlidePath)

Method Summary

Modifier and Type	Method and Description
(package private) short	ByteArrayToShort(byte[] bytes, int offset)
void	CloseFile()
SlideBook7Reader.CImageGroup	GetImageGroup(int inCaptureId)
int	GetNumCaptures()
java.lang.Boolean	LoadMetadata()
boolean	ReadPlane(int inCaptureId, byte[] ouBuf, int inPositionIndex, int inTimepointIndex, int inZPlaneIndex, int inChannelIndex)
java.lang.Boolean	ReadSld()
java.lang.Boolean	ReadSld(java.io.InputStream inInputStream)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

mSlidePath

public java.lang.String mSlidePath

mErrorMessage

public java.lang.String mErrorMessage

mFile

public SlideBook7Reader.CSBFile70 mFile

mSlideRecord

public SlideBook7Reader.CSlideRecord70 mSlideRecord

mCImageGroupList

public java.util.ArrayList<SlideBook7Reader.CImageGroup> mCImageGroupList

mPathToStreamMap

java.util.HashMap<java.lang.String,loci.common.RandomAccessInputStream> mPathToStreamMap

mCounterToPathMap

java.util.TreeMap<java.lang.Integer,java.lang.String> mCounterToPathMap

kMaxNumberOpenFiles

public static final int kMaxNumberOpenFiles

See Also:

Constant Field Values

mCurrentFileCounter

public int mCurrentFileCounter

Constructor Detail

DataLoader

public DataLoader(java.lang.String inSlidePath)

Method Detail

LoadMetadata

public java.lang.Boolean LoadMetadata()

ReadSld

public java.lang.Boolean ReadSld()
                          throws java.io.FileNotFoundException

Throws:

java.io.FileNotFoundException

ReadSld

public java.lang.Boolean ReadSld(java.io.InputStream inInputStream)
                          throws java.io.FileNotFoundException

Throws:

java.io.FileNotFoundException

GetNumCaptures

public int GetNumCaptures()

GetImageGroup

public SlideBook7Reader.CImageGroup GetImageGroup(int inCaptureId)

ReadPlane

public boolean ReadPlane(int inCaptureId,
                         byte[] ouBuf,
                         int inPositionIndex,
                         int inTimepointIndex,
                         int inZPlaneIndex,
                         int inChannelIndex)
                  throws java.io.IOException

Throws:

java.io.IOException

ByteArrayToShort

short ByteArrayToShort(byte[] bytes,
                       int offset)

CloseFile

public void CloseFile()
               throws java.io.IOException

Throws:

java.io.IOException