loci.formats.in

Class SlideBook7Reader.CSBFile70

java.lang.Object

loci.formats.in.SlideBook7Reader.CSBFile70

Enclosing class:

SlideBook7Reader

class SlideBook7Reader.CSBFile70
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	kAnnotationRecordFilename
static java.lang.String	kAuxDataFilename
static java.lang.String	kBinaryFileSuffix
static java.lang.String	kChannelRecordFilename
static java.lang.String	kElapsedTimesFilename
static java.lang.String	kImageDirSuffix
static java.lang.String	kImageRecordFilename
static java.lang.String	kMaskRecordFilename
static int	kNumDigitsInTimepoint
static java.lang.String	kRootDirSuffix
static java.lang.String	kSAPositionDataFilename
static java.lang.String	kSlideSuffix
static java.lang.String	kStagePositionDataFilename
java.lang.String	mSlidePath

Constructor Summary

Constructors

Constructor and Description
CSBFile70(java.lang.String inSlidePath)

Method Summary

Modifier and Type	Method and Description
java.lang.Integer	GetChannelIndexOfPath(java.lang.String inPath)
java.lang.String	GetHistogramDataFile(java.lang.String inTitle, java.lang.Integer inChannel, java.lang.Integer inTimepoint)
java.lang.String	GetImageDataFile(java.lang.String inTitle, java.lang.Integer inChannel, java.lang.Integer inTimepoint)
java.lang.String	GetImageGroupDirectory(java.lang.String inTitle)
java.lang.String[]	GetListOfHistogramDataFiles(java.lang.String inTitle)
java.lang.String[]	GetListOfHistogramSummaryFiles(java.lang.String inTitle)
java.lang.String[]	GetListOfImageDataFiles(java.lang.String inTitle)
java.lang.String[]	GetListOfImageGroupTitles()
java.lang.String[]	GetListOfMaskDataFiles(java.lang.String inTitle)
protected java.lang.String[]	getListOfNpyDataFiles(java.lang.String inTitle, java.lang.String inStartWith)
java.lang.String	GetMaskDataFile(java.lang.String inTitle, java.lang.Integer inTimepoint)
java.lang.String	GetSlideRootDirectory()
java.lang.Integer	GetTimepointOfPath(java.lang.String inPath)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

kSlideSuffix

public static final java.lang.String kSlideSuffix

See Also:

Constant Field Values

kRootDirSuffix

public static final java.lang.String kRootDirSuffix

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Constant Field Values

kImageDirSuffix

public static final java.lang.String kImageDirSuffix

See Also:

Constant Field Values

kBinaryFileSuffix

public static final java.lang.String kBinaryFileSuffix

See Also:

Constant Field Values

kImageRecordFilename

public static final java.lang.String kImageRecordFilename

See Also:

Constant Field Values

kChannelRecordFilename

public static final java.lang.String kChannelRecordFilename

See Also:

Constant Field Values

kAnnotationRecordFilename

public static final java.lang.String kAnnotationRecordFilename

See Also:

Constant Field Values

kMaskRecordFilename

public static final java.lang.String kMaskRecordFilename

See Also:

Constant Field Values

kAuxDataFilename

public static final java.lang.String kAuxDataFilename

See Also:

Constant Field Values

kElapsedTimesFilename

public static final java.lang.String kElapsedTimesFilename

See Also:

Constant Field Values

kSAPositionDataFilename

public static final java.lang.String kSAPositionDataFilename

See Also:

Constant Field Values

kStagePositionDataFilename

public static final java.lang.String kStagePositionDataFilename

See Also:

Constant Field Values

kNumDigitsInTimepoint

public static final int kNumDigitsInTimepoint

See Also:

Constant Field Values

mSlidePath

public java.lang.String mSlidePath

Constructor Detail

CSBFile70

public CSBFile70(java.lang.String inSlidePath)

Method Detail

GetSlideRootDirectory

public java.lang.String GetSlideRootDirectory()

GetListOfImageGroupTitles

public java.lang.String[] GetListOfImageGroupTitles()

GetImageGroupDirectory

public java.lang.String GetImageGroupDirectory(java.lang.String inTitle)

GetImageDataFile

public java.lang.String GetImageDataFile(java.lang.String inTitle,
                                         java.lang.Integer inChannel,
                                         java.lang.Integer inTimepoint)

GetMaskDataFile

public java.lang.String GetMaskDataFile(java.lang.String inTitle,
                                        java.lang.Integer inTimepoint)

GetHistogramDataFile

public java.lang.String GetHistogramDataFile(java.lang.String inTitle,
                                             java.lang.Integer inChannel,
                                             java.lang.Integer inTimepoint)

GetChannelIndexOfPath

public java.lang.Integer GetChannelIndexOfPath(java.lang.String inPath)

GetTimepointOfPath

public java.lang.Integer GetTimepointOfPath(java.lang.String inPath)

GetListOfImageDataFiles

public java.lang.String[] GetListOfImageDataFiles(java.lang.String inTitle)

GetListOfMaskDataFiles

public java.lang.String[] GetListOfMaskDataFiles(java.lang.String inTitle)

GetListOfHistogramDataFiles

public java.lang.String[] GetListOfHistogramDataFiles(java.lang.String inTitle)

GetListOfHistogramSummaryFiles

public java.lang.String[] GetListOfHistogramSummaryFiles(java.lang.String inTitle)

getListOfNpyDataFiles

protected java.lang.String[] getListOfNpyDataFiles(java.lang.String inTitle,
                                                   java.lang.String inStartWith)