public class Image extends AbstractOMEModelObject
Modifier and Type | Field and Description |
---|---|
private Timestamp |
acquisitionDate |
private List<Annotation> |
annotationLinks |
private List<Dataset> |
datasetLinks |
private String |
description |
private Experiment |
experiment |
private Experimenter |
experimenter |
private ExperimenterGroup |
experimenterGroup |
private List<Folder> |
folderLinks |
private String |
id |
private ImagingEnvironment |
imagingEnvironment |
private Instrument |
instrument |
private static org.slf4j.Logger |
LOGGER
Logger for this class.
|
private List<MicrobeamManipulation> |
microbeamManipulationLinks |
private String |
name |
static String |
NAMESPACE |
private ObjectiveSettings |
objectiveSettings |
private Pixels |
pixels |
private List<ROI> |
roiLinks |
private StageLabel |
stageLabel |
private List<WellSample> |
wellSamples |
Constructor and Description |
---|
Image()
Default constructor.
|
Image(Element element,
OMEModel model)
Constructs Image recursively from an XML DOM tree.
|
Image(Image orig)
Copy constructor.
|
getChildrenByTagName, stripNamespacePrefix
public static final String NAMESPACE
private static final org.slf4j.Logger LOGGER
private String id
private String name
private Timestamp acquisitionDate
private Experimenter experimenter
private String description
private Experiment experiment
private ExperimenterGroup experimenterGroup
private Instrument instrument
private ObjectiveSettings objectiveSettings
private ImagingEnvironment imagingEnvironment
private StageLabel stageLabel
private Pixels pixels
private List<MicrobeamManipulation> microbeamManipulationLinks
private List<Annotation> annotationLinks
private List<WellSample> wellSamples
public Image()
public Image(Element element, OMEModel model) throws EnumerationException
element
- Root of the XML DOM tree to construct a model object
graph from.model
- Handler for the OME model which keeps track of instances
and references seen during object population.EnumerationException
- If there is an error instantiating an
enumeration during model object creation.public Image(Image orig)
public void update(Element element, OMEModel model) throws EnumerationException
update
in interface OMEModelObject
update
in class AbstractOMEModelObject
element
- Root of the XML DOM tree to construct a model object
graph from.model
- Handler for the OME model which keeps track of instances
and references seen during object population.EnumerationException
- If there is an error instantiating an
enumeration during model object creation.public boolean link(Reference reference, OMEModelObject o)
OMEModelObject
link
in interface OMEModelObject
link
in class AbstractOMEModelObject
reference
- The type qualifier for the reference. This should
be the corresponding reference type for o
. If, for example,
o
is of type Image
, reference
MUST be of type ImageRef
.o
- Model object to link to.true
if this model object was able to handle the
reference, false
otherwise.public String getID()
public void setID(String id)
public String getName()
public void setName(String name)
public Timestamp getAcquisitionDate()
public void setAcquisitionDate(Timestamp acquisitionDate)
public Experimenter getLinkedExperimenter()
public void linkExperimenter(Experimenter o)
public void unlinkExperimenter(Experimenter o)
public String getDescription()
public void setDescription(String description)
public Experiment getLinkedExperiment()
public void linkExperiment(Experiment o)
public void unlinkExperiment(Experiment o)
public ExperimenterGroup getLinkedExperimenterGroup()
public void linkExperimenterGroup(ExperimenterGroup o)
public void unlinkExperimenterGroup(ExperimenterGroup o)
public Instrument getLinkedInstrument()
public void linkInstrument(Instrument o)
public void unlinkInstrument(Instrument o)
public ObjectiveSettings getObjectiveSettings()
public void setObjectiveSettings(ObjectiveSettings objectiveSettings)
public ImagingEnvironment getImagingEnvironment()
public void setImagingEnvironment(ImagingEnvironment imagingEnvironment)
public StageLabel getStageLabel()
public void setStageLabel(StageLabel stageLabel)
public Pixels getPixels()
public void setPixels(Pixels pixels)
public int sizeOfLinkedROIList()
public ROI getLinkedROI(int index)
public boolean linkROI(ROI o)
public boolean unlinkROI(ROI o)
public int sizeOfLinkedMicrobeamManipulationList()
public List<MicrobeamManipulation> copyLinkedMicrobeamManipulationList()
public MicrobeamManipulation getLinkedMicrobeamManipulation(int index)
public MicrobeamManipulation setLinkedMicrobeamManipulation(int index, MicrobeamManipulation o)
public boolean linkMicrobeamManipulation(MicrobeamManipulation o)
public boolean unlinkMicrobeamManipulation(MicrobeamManipulation o)
public int sizeOfLinkedAnnotationList()
public List<Annotation> copyLinkedAnnotationList()
public Annotation getLinkedAnnotation(int index)
public Annotation setLinkedAnnotation(int index, Annotation o)
public boolean linkAnnotation(Annotation o)
public boolean unlinkAnnotation(Annotation o)
public int sizeOfLinkedDatasetList()
public Dataset getLinkedDataset(int index)
public boolean linkDataset(Dataset o)
public boolean unlinkDataset(Dataset o)
public int sizeOfLinkedFolderList()
public Folder getLinkedFolder(int index)
public boolean linkFolder(Folder o)
public boolean unlinkFolder(Folder o)
public int sizeOfLinkedWellSampleList()
public List<WellSample> copyLinkedWellSampleList()
public WellSample getLinkedWellSample(int index)
public WellSample setLinkedWellSample(int index, WellSample o)
public boolean linkWellSample(WellSample o)
public boolean unlinkWellSample(WellSample o)
public Element asXMLElement(Document document)
OMEModelObject
asXMLElement
in interface OMEModelObject
asXMLElement
in class AbstractOMEModelObject
document
- Destination document for element creation, etc.protected Element asXMLElement(Document document, Element Image_element)
AbstractOMEModelObject
asXMLElement
in class AbstractOMEModelObject
document
- Destination document for element creation, etc.Image_element
- Element from the subclass. If null a new
element will be created of this class.element
populated with properties from this class.Copyright © 2016 Open Microscopy Environment