Uses of Class
loci.common.services.ServiceException

Packages that use ServiceException

Package	Description
loci.formats.in	Package containing Bio-Formats file format readers.
loci.formats.out	Package containing Bio-Formats file format writers.
loci.formats.services
loci.formats.tools	Package containing utility methods corresponding to the Bio-Formats command line tools.

Uses of ServiceException in loci.formats.in

Methods in loci.formats.in that throw ServiceException

Modifier and Type	Method and Description
static void	CellVoyagerReader.main(String[] args)

Uses of ServiceException in loci.formats.out

Methods in loci.formats.out that throw ServiceException

Modifier and Type	Method and Description
private void	OMETiffWriter.setupServiceAndMetadata()

Uses of ServiceException in loci.formats.services

Methods in loci.formats.services that throw ServiceException

Modifier and Type	Method and Description
void	OMEXMLService.convertMetadata(String xml, MetadataStore dest) Converts information from an OME-XML string (source) into a metadata store (destination).
void	OMEXMLServiceImpl.convertMetadata(String xml, MetadataStore dest)
OMEXMLMetadata	OMEXMLService.createOMEXMLMetadata() Creates an OME-XML metadata object using reflection, to avoid direct dependencies on the optional loci.formats.ome package.
OMEXMLMetadata	OMEXMLServiceImpl.createOMEXMLMetadata()
OMEXMLMetadata	OMEXMLService.createOMEXMLMetadata(String xml) Creates an OME-XML metadata object using reflection, to avoid direct dependencies on the optional loci.formats.ome package, wrapping a DOM representation of the given OME-XML string.
OMEXMLMetadata	OMEXMLServiceImpl.createOMEXMLMetadata(String xml)
OMEXMLMetadata	OMEXMLService.createOMEXMLMetadata(String xml, String version) Creates an OME-XML metadata object using reflection, to avoid direct dependencies on the optional loci.formats.ome package, wrapping a DOM representation of the given OME-XML string.
OMEXMLMetadata	OMEXMLServiceImpl.createOMEXMLMetadata(String xml, String version)
OMEModelObject	OMEXMLService.createOMEXMLRoot(String xml) Constructs an OME root node.
OMEModelObject	OMEXMLServiceImpl.createOMEXMLRoot(String xml)
private OMEXMLMetadataRoot	OMEXMLServiceImpl.createRoot(String xml) Constructs an OME root node.
void	LuraWaveServiceImpl.decodeToMemoryGray16(short[] image, int imageoffset, int limit, int quality, int scale, int pdx, int pdy, int clip_x, int clip_y, int clip_w, int clip_h)
void	LuraWaveService.decodeToMemoryGray16(short[] image, int imageoffset, int limit, int quality, int scale, int pdx, int pdy, int clip_x, int clip_y, int clip_w, int clip_h) Wraps lwfDecoder.decodeToMemoryGray16(short[], int, int, int, int, int, int, int, int, int, int).
void	LuraWaveServiceImpl.decodeToMemoryGray8(byte[] image, int limit, int quality, int scale)
void	LuraWaveService.decodeToMemoryGray8(byte[] image, int limit, int quality, int scale) Wraps lwfDecoder.decodeToMemoryGray8(byte[], int, int, int).
Object	NetCDFServiceImpl.getArray(String path, int[] origin, int[] shape)
Object	NetCDFService.getArray(String path, int[] origin, int[] shape) Retrieves an HDF path's values.
OMEXMLMetadata	OMEXMLService.getOMEMetadata(MetadataRetrieve src) Returns a OMEXMLMetadata object with the same contents as the given MetadataRetrieve, converting it if necessary.
OMEXMLMetadata	OMEXMLServiceImpl.getOMEMetadata(MetadataRetrieve src)
String	OMEXMLService.getOMEXML(MetadataRetrieve src) Extracts an OME-XML metadata string from the given metadata object, by converting to an OME-XML metadata object if necessary.
String	OMEXMLServiceImpl.getOMEXML(MetadataRetrieve src)
Object	NetCDFServiceImpl.getVariableValue(String name)
Object	NetCDFService.getVariableValue(String path) Retrieves a variable's value.
void	LuraWaveServiceImpl.initialize(InputStream stream)
void	LuraWaveService.initialize(InputStream stream) Wraps lwfDecoder.lwfDecoder(InputStream, String, String).
void	JPEGTurboService.initialize(RandomAccessInputStream jpeg, int width, int height)
void	JPEGTurboServiceImpl.initialize(RandomAccessInputStream jpeg, int width, int height)
void	EXIFServiceImpl.initialize(String file)
void	EXIFService.initialize(String file)
BufferedImage	JAIIIOServiceImpl.readImage(InputStream in)
BufferedImage	JAIIIOService.readImage(InputStream in) Reads an image using JAI Image I/O using the JPEG 2000 codec.
BufferedImage	JAIIIOServiceImpl.readImage(InputStream in, JPEG2000CodecOptions options)
BufferedImage	JAIIIOService.readImage(InputStream in, JPEG2000CodecOptions options) Reads an image using JAI Image I/O using the JPEG 2000 codec.
Raster	JAIIIOServiceImpl.readRaster(InputStream in)
Raster	JAIIIOService.readRaster(InputStream in) Reads an image into a raster using JAI Image I/O using the JPEG 2000 codec.
Raster	JAIIIOServiceImpl.readRaster(InputStream in, JPEG2000CodecOptions options)
Raster	JAIIIOService.readRaster(InputStream in, JPEG2000CodecOptions options) Reads an image into a raster using JAI Image I/O using the JPEG 2000 codec.
String	OMEXMLService.transformToLatestVersion(String xml) Transforms the given OME-XML string to the latest supported version of of the OME-XML schema.
String	OMEXMLServiceImpl.transformToLatestVersion(String xml)
void	JAIIIOServiceImpl.writeImage(OutputStream out, BufferedImage img, JPEG2000CodecOptions options)
void	JAIIIOService.writeImage(OutputStream out, BufferedImage img, JPEG2000CodecOptions options) Writes an image using JAI Image I/O using the JPEG 2000 codec.

Uses of ServiceException in loci.formats.tools

Methods in loci.formats.tools that throw ServiceException

Modifier and Type	Method and Description
private IMetadata	MakeTestOmeTiff.createMetadata(String name, CoreMetadata info)