Core metadata values. More...
#include <ome/bioformats/CoreMetadata.h>
Collaboration diagram for ome::bioformats::CoreMetadata:Public Member Functions | |
| CoreMetadata () | |
| Constructor. | |
| CoreMetadata (const CoreMetadata ©) | |
| Copy constructor. More... | |
| virtual | ~CoreMetadata () |
| Destructor. | |
Public Attributes | |
| dimension_size_type | sizeX |
| Width (in pixels) of images in this series. | |
| dimension_size_type | sizeY |
| Height (in pixels) of images in this series. | |
| dimension_size_type | sizeZ |
| Number of Z sections. | |
| std::vector< dimension_size_type > | sizeC |
| Number of channels. | |
| dimension_size_type | sizeT |
| Number of timepoints. | |
| dimension_size_type | thumbSizeX |
| Width (in pixels) of thumbnail images in this series. | |
| dimension_size_type | thumbSizeY |
| Height (in pixels) of thumbnail images in this series. | |
| ome::xml::model::enums::PixelType | pixelType |
| Number of bytes per pixel. | |
| pixel_size_type | bitsPerPixel |
| Number of valid bits per pixel. */. | |
| dimension_size_type | imageCount |
| Total number of images. | |
| Modulo | moduloZ |
| Modulo Z dimension. | |
| Modulo | moduloT |
| Modulo T dimension. | |
| Modulo | moduloC |
| Modulo C dimension. | |
| ome::xml::model::enums::DimensionOrder | dimensionOrder |
| Order in which dimensions are stored. | |
| bool | orderCertain |
| Are we confident that the dimension order is correct? | |
| bool | littleEndian |
| Is the pixel byte order little endian? | |
| bool | interleaved |
true if channels are stored RGBRGBRGB...; false if channels are stored RRR...GGG...BBB... | |
| bool | indexed |
| Are images are stored as indexed color? | |
| bool | falseColor |
| Can the color map (if present) be ignored? | |
| bool | metadataComplete |
| Is all of the metadata stored within the file parsed correctly? | |
| MetadataMap | seriesMetadata |
| Non-core metadata associated with this series. | |
| bool | thumbnail |
| Is this series is a lower-resolution copy of another series? | |
| dimension_size_type | resolutionCount |
| Sub-resolution count. More... | |
Detailed Description
Core metadata values.
- Note
- The Java implementation had a constructor to construct by copying the core metadata from a series of an existing reader. This is not duplicated here. Use this instead:
CoreMetadata copy(reader.getCoreMetadataList().at(index));
Where reader is a FormatReader and index is the core index.
- Todo:
- We may want to consider refactoring the FormatReader getter methods that fill in missing CoreMetadata fields on the fly (getThumbSizeX, getThumbSizeY) to avoid doing so – one alternate approach would be to have this class use getter methods instead of public fields.
Constructor & Destructor Documentation
| ome::bioformats::CoreMetadata::CoreMetadata | ( | const CoreMetadata & | copy | ) |
Copy constructor.
- Parameters
-
copy the CoreMetadata to copy.
Member Data Documentation
| dimension_size_type ome::bioformats::CoreMetadata::resolutionCount |
Sub-resolution count.
The number of images following this image which are sub-sampled lower resolution copies of this image. The count includes this image, so an image with two following sub-resolution images will have a count of 3 .
The documentation for this class was generated from the following files:
- ome/bioformats/CoreMetadata.h
- ome/bioformats/CoreMetadata.cpp
