Uses of Class
ome.annotations.NotNull

Packages that use NotNull

Package	Description
ome.api	Contains the central verbs of the Omero System.
ome.logic	The central repository of implementations which will be accessible through this server.
ome.services.sessions
ome.services.sharing	ome.api.IShare support infrastructure.

Uses of NotNull in ome.api

Method parameters in ome.api with annotations of type NotNull

Modifier and Type	Method and Description
CommentAnnotation	IShare.addComment(long shareId, java.lang.String comment) Deprecated. Creates comment for share.
void	IAdmin.addGroupOwners(ExperimenterGroup group, Experimenter... owner) adds the given users to the owner list for this group.
void	IAdmin.addGroupOwners(ExperimenterGroup group, Experimenter... owner) adds the given users to the owner list for this group.
void	IAdmin.addGroups(Experimenter user, ExperimenterGroup... groups) adds a user to the given groups.
void	IAdmin.addGroups(Experimenter user, ExperimenterGroup... groups) adds a user to the given groups.
<T extends IObject> void	IShare.addObject(long shareId, T object) Deprecated. Adds new item to share.
<T extends IObject> void	IShare.addObjects(long shareId, T... objects) Deprecated. Adds new items to share.
void	Search.addOrderByAsc(java.lang.String path) A path from the target entity which will be added to the current stack of order statements applied to the query.
void	Search.addOrderByDesc(java.lang.String path) A path from the target entity which will be added to the current stack of order statements applied to the query.
CommentAnnotation	IShare.addReply(long shareId, java.lang.String comment, CommentAnnotation replyTo) Deprecated. Creates comment which replies to an existing comment.
CommentAnnotation	IShare.addReply(long shareId, java.lang.String comment, CommentAnnotation replyTo) Deprecated. Creates comment which replies to an existing comment.
java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToDataset(long from, long to) Applies rendering settings to all images in a given Dataset.
java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToDataset(long from, long to) Applies rendering settings to all images in a given Dataset.
boolean	IRenderingSettings.applySettingsToImage(long from, long to) Applies rendering settings to a given Image.
boolean	IRenderingSettings.applySettingsToImage(long from, long to) Applies rendering settings to a given Image.
java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToImages(long from, java.util.List<java.lang.Long> to) Applies rendering settings to a given Image.
java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToImages(long from, java.util.List<java.lang.Long> to) Applies rendering settings to a given Image.
boolean	IRenderingSettings.applySettingsToPixels(long from, long to) Applies rendering settings to a given Pixels.
boolean	IRenderingSettings.applySettingsToPixels(long from, long to) Applies rendering settings to a given Pixels.
java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToProject(long from, long to) Applies rendering settings to all images in all Datasets of a given Project.
java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToProject(long from, long to) Applies rendering settings to all images in all Datasets of a given Project.
<T extends IObject> java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToSet(long from, java.lang.Class<T> type, java.util.Set<java.lang.Long> nodeIds) Applies rendering settings to one or many containers.
<T extends IObject> java.util.Map<java.lang.Boolean,java.util.List<java.lang.Long>>	IRenderingSettings.applySettingsToSet(long from, java.lang.Class<T> type, java.util.Set<java.lang.Long> nodeIds) Applies rendering settings to one or many containers.
void	IAdmin.changeGroup(IObject iObject, java.lang.String groupName) call details.setGroup() on this instance.
void	IAdmin.changeGroup(IObject iObject, java.lang.String groupName) call details.setGroup() on this instance.
void	IAdmin.changeOwner(IObject iObject, java.lang.String omeName) call details.setOwner() on this instance.
void	IAdmin.changeOwner(IObject iObject, java.lang.String omeName) call details.setOwner() on this instance.
void	IAdmin.changePasswordWithOldPassword(java.lang.String oldPassword, java.lang.String newPassword) change the password for the current user by passing the old password.
void	IAdmin.changePermissions(IObject iObject, Permissions perms) call defaults.setPermissions() on this instance.
void	IAdmin.changePermissions(IObject iObject, Permissions perms) call defaults.setPermissions() on this instance.
void	IAdmin.changeUserPassword(java.lang.String omeName, java.lang.String newPassword) change the password for the a given user.
int	ISession.closeSession(Session session) Closes session and releases all resources.
java.lang.Long	IMetadata.countAnnotationsUsedNotOwned(java.lang.Class annotationType, long userID) Counts the number of annotation of a given type used by the specified user but not owned by the user.
java.lang.Long	IMetadata.countSpecifiedAnnotations(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, Parameters options) Counts the number of annotation of a given type.
<T extends IObject> T	IContainer.createDataObject(T object, Parameters options) Creates the specified data object.
IObject[]	IContainer.createDataObjects(IObject[] dataObjects, Parameters options) convenience method to save network calls.
long	IAdmin.createExperimenter(Experimenter experimenter, ExperimenterGroup defaultGroup, ExperimenterGroup... otherGroups) create and return a new user in the given groups.
long	IAdmin.createExperimenter(Experimenter experimenter, ExperimenterGroup defaultGroup, ExperimenterGroup... otherGroups) create and return a new user in the given groups.
long	IAdmin.createExperimenterWithPassword(Experimenter experimenter, java.lang.String password, ExperimenterGroup defaultGroup, ExperimenterGroup... otherGroups) create and return a new user in the given groups with password.
long	IAdmin.createExperimenterWithPassword(Experimenter experimenter, java.lang.String password, ExperimenterGroup defaultGroup, ExperimenterGroup... otherGroups) create and return a new user in the given groups with password.
RenderingDef	IRenderingSettings.createNewRenderingDef(Pixels pixels) Creates a new rendering definition object along with its sub-objects.
long	IAdmin.createRestrictedSystemUser(Experimenter newSystemUser, java.util.List<AdminPrivilege> privileges) Create and return a new system user.
long	IAdmin.createRestrictedSystemUser(Experimenter newSystemUser, java.util.List<AdminPrivilege> privileges) Create and return a new system user.
long	IAdmin.createRestrictedSystemUserWithPassword(Experimenter newSystemUser, java.util.List<AdminPrivilege> privileges, java.lang.String password) Create and return a new system user.
long	IAdmin.createRestrictedSystemUserWithPassword(Experimenter newSystemUser, java.util.List<AdminPrivilege> privileges, java.lang.String password) Create and return a new system user.
Session	ISession.createSession(Principal principal, java.lang.String credentials) Creates a new session and returns it to the user.
Session	ISession.createSessionWithTimeout(Principal principal, long timeToLiveMilliseconds) Allows an admin to create a Session for the give Principal
Session	ISession.createSessionWithTimeouts(Principal principal, long timeToLiveMilliseconds, long timeToIdleMilliseconds) Allows an admin to create a Session for the give Principal
<T extends IObject> long	IShare.createShare(java.lang.String description, java.sql.Timestamp expiration, java.util.List<T> items, java.util.List<Experimenter> exps, java.util.List<java.lang.String> guests, boolean enabled) Deprecated. Creates share with all related: items, members, and guests.
long	IAdmin.createSystemUser(Experimenter newSystemUser) create and return a new system user.
void	ThumbnailStore.createThumbnailsByLongestSideSet(java.lang.Integer size, java.util.Set<java.lang.Long> pixelsIds) Creates thumbnails for a number of pixels sets using a given set of rendering settings (RenderingDef) in the on-disk cache.
long	IAdmin.createUser(Experimenter newUser, java.lang.String group) create and return a new user.
long	IAdmin.createUser(Experimenter newUser, java.lang.String group) create and return a new user.
Experimenter	ILdap.createUser(java.lang.String username) Creates an Experimenter entry in the OMERO DB based on the supplied LDAP username.
void	IShare.deleteComment(Annotation comment) Deprecated. Deletes comment from the database.
<T extends IEnum> void	ITypes.deleteEnumeration(T oEnum) deletes enumeration value specified by object
void	IAdmin.deleteExperimenter(Experimenter user) removes a user by removing the password information for that user as well as all GroupExperimenterMap instances.
void	IAdmin.deleteGroup(ExperimenterGroup group) removes a group by first removing all users in the group, and then deleting the actual ExperimenterGroup instance.
void	IDelete.deleteImages(java.util.Set<java.lang.Long> ids, boolean force) Deletes several Image instances within a single transaction via the IDelete.deleteImage(long, boolean) method.
<T extends IObject> T	IQuery.find(java.lang.Class<T> klass, long id) lookup an entity by class and id.
<T extends IObject> java.util.List<T>	IQuery.findAll(java.lang.Class<T> klass, Filter filter) lookup all entities that belong to this class and match filter.
<T extends IObject> java.util.List<T>	IQuery.findAllByExample(T example, Filter filter) search based on provided example entity.
<T extends IObject> java.util.List<T>	IQuery.findAllByFullText(java.lang.Class<T> type, java.lang.String query, Parameters parameters) executes a full text search based on Lucene.
<T extends IObject> java.util.List<T>	IQuery.findAllByFullText(java.lang.Class<T> type, java.lang.String query, Parameters parameters) executes a full text search based on Lucene.
<T extends IObject> java.util.List<T>	IQuery.findAllByQuery(java.lang.String queryName, Parameters parameters) executes the stored query with the given name.
<T extends IObject> java.util.List<T>	IQuery.findAllByString(java.lang.Class<T> klass, java.lang.String field, java.lang.String stringValue, boolean caseSensitive, Filter filter) search a given field matching against a String.
<T extends IObject> java.util.List<T>	IQuery.findAllByString(java.lang.Class<T> klass, java.lang.String field, java.lang.String stringValue, boolean caseSensitive, Filter filter) search a given field matching against a String.
<T extends IObject> T	IQuery.findByExample(T example) search based on provided example entity.
<T extends IObject> T	IQuery.findByQuery(java.lang.String queryName, Parameters parameters) executes the stored query with the given name.
<T extends IObject> T	IQuery.findByString(java.lang.Class<T> klass, java.lang.String field, java.lang.String value) search a given field matching against a String.
<T extends IObject> T	IQuery.findByString(java.lang.Class<T> klass, java.lang.String field, java.lang.String value) search a given field matching against a String.
<T extends IObject> java.util.Set<IObject>	IContainer.findContainerHierarchies(java.lang.Class<T> rootNodeType, java.util.Set<java.lang.Long> imagesIds, Parameters options) Retrieves hierarchy trees in various hierarchies that contain the specified Images.
<T extends IObject> java.util.Set<IObject>	IContainer.findContainerHierarchies(java.lang.Class<T> rootNodeType, java.util.Set<java.lang.Long> imagesIds, Parameters options) Retrieves hierarchy trees in various hierarchies that contain the specified Images.
java.lang.String	ILdap.findDN(java.lang.String username) Searches unique Distinguished Name - String in LDAP for Common Name equals username.
Experimenter	ILdap.findExperimenter(java.lang.String username) Searches Experimenter by unique Distinguished Name - String in LDAP for Common Name equals username.
ExperimenterGroup	ILdap.findGroup(java.lang.String groupname) Looks up a specific ExperimenterGroup in LDAP using the provided group name.
java.lang.String	ILdap.findGroupDN(java.lang.String groupname) Looks up the DN for a group.
<T extends IObject> T	IQuery.get(java.lang.Class<T> klass, long id) lookup an entity by class and id.
java.util.Map<java.lang.String,Experimenter>	IShare.getActiveConnections(long shareId) Deprecated. Gets actual active connections to share.
java.util.List<AdminPrivilege>	IAdmin.getAdminPrivileges(Experimenter user) Gets the light administrator privileges for the given user.
java.util.List<Experimenter>	IAdmin.getAdminsWithPrivileges(java.util.List<AdminPrivilege> privileges) Gets the administrators who have all the given privileges.
java.util.Map	IContainer.getCollectionCount(java.lang.String type, java.lang.String property, java.util.Set<java.lang.Long> ids, Parameters options) Counts the number of members in a collection for a given object.
java.util.Map	IContainer.getCollectionCount(java.lang.String type, java.lang.String property, java.util.Set<java.lang.Long> ids, Parameters options) Counts the number of members in a collection for a given object.
java.util.Map	IContainer.getCollectionCount(java.lang.String type, java.lang.String property, java.util.Set<java.lang.Long> ids, Parameters options) Counts the number of members in a collection for a given object.
java.util.Map<java.lang.Long,java.lang.Long>	IShare.getCommentCount(java.util.Set<java.lang.Long> shareIds) Deprecated. Returns a map from share id to comment count.
java.lang.String	IConfig.getConfigValue(java.lang.String key) retrieve a configuration value from the backend store.
java.util.Map<java.lang.String,java.lang.String>	IConfig.getConfigValues(java.lang.String keyRegex) retrieves configuration values from the backend store which match the given regex.
java.util.List<Event>	IShare.getEvents(long shareId, Experimenter experimenter, java.sql.Timestamp from, java.sql.Timestamp to) Deprecated. Gets events for share per experimenter for period of time.
<T extends IObject> java.util.Set<Image>	IContainer.getImages(java.lang.Class<T> rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options) Retrieve a user's (or all users') images within any given container.
<T extends IObject> java.util.Set<Image>	IContainer.getImages(java.lang.Class<T> rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options) Retrieve a user's (or all users') images within any given container.
java.util.Map<java.lang.Long,java.lang.Long>	IShare.getMemberCount(java.util.Set<java.lang.Long> shareIds) Deprecated. Returns a map from share id to the count of total members (including the owner).
java.util.Set<Session>	IShare.getMemberSharesFor(Experimenter user, boolean onlyActive) Deprecated. Gets all shares where given Experimenter is a member.
java.util.Map<java.lang.String,Experimenter>	IShare.getPastConnections(long shareId) Deprecated. Gets previous connections to share.
int	ISession.getReferenceCount(java.lang.String sessionUuid) Retrieves the current reference count for the given uuid.
RenderingDef	IRenderingSettings.getRenderingSettings(long pixelsId) Returns the default rendering settings for a given pixels for the current user.
Session	ISession.getSession(java.lang.String sessionUuid) Retrieves the session associated with this uuid, updating the last access time as well.
java.util.Set<Session>	IShare.getSharesOwnedBy(Experimenter user, boolean onlyActive) Deprecated. Gets all shares owned by the given Experimenter.
java.util.Map<java.lang.Long,java.lang.Long>	IMetadata.getTaggedObjectsCount(java.util.Set<java.lang.Long> tagIds, Parameters options) Returns a map whose key is a tag's id and the value the number of Projects, Datasets, and Images linked to that tag.
java.util.Map<java.lang.Long,byte[]>	ThumbnailStore.getThumbnailByLongestSideSet(java.lang.Integer size, java.util.Set<java.lang.Long> pixelsIds) Retrieves a number of thumbnails for pixels sets using given sets of rendering settings (RenderingDef).
java.util.Map<java.lang.Long,byte[]>	ThumbnailStore.getThumbnailSet(java.lang.Integer sizeX, java.lang.Integer sizeY, java.util.Set<java.lang.Long> pixelsIds) Retrieves a number of thumbnails for pixels sets using given sets of rendering settings (RenderingDef).
void	IShare.invalidateConnection(long shareId, Experimenter exp) Deprecated. Makes the connection invalid for share for specifiec user.
ILink[]	IContainer.link(ILink[] dataObjectLinks, Parameters options) Convenience method for creating links.
<A extends Annotation> java.util.Set<A>	IMetadata.loadAnnotation(java.util.Set<java.lang.Long> annotationIds) Loads the specified annotations.
<T extends IObject,A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	IMetadata.loadAnnotations(java.lang.Class<T> nodeType, java.util.Set<java.lang.Long> rootNodeIds, java.util.Set<java.lang.String> annotationType, java.util.Set<java.lang.Long> annotatorIds, Parameters options) Loads all the annotations of given types, that have been attached to the specified rootNodes for the specified annotatorIds.
<T extends IObject,A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	IMetadata.loadAnnotations(java.lang.Class<T> nodeType, java.util.Set<java.lang.Long> rootNodeIds, java.util.Set<java.lang.String> annotationType, java.util.Set<java.lang.Long> annotatorIds, Parameters options) Loads all the annotations of given types, that have been attached to the specified rootNodes for the specified annotatorIds.
<T extends IObject,A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	IMetadata.loadAnnotations(java.lang.Class<T> nodeType, java.util.Set<java.lang.Long> rootNodeIds, java.util.Set<java.lang.String> annotationType, java.util.Set<java.lang.Long> annotatorIds, Parameters options) Loads all the annotations of given types, that have been attached to the specified rootNodes for the specified annotatorIds.
java.util.Set<IObject>	IMetadata.loadAnnotationsUsedNotOwned(java.lang.Class annotationType, long userID) Loads the annotations of a given type used by the specified user but not owned by the user.
java.util.Set<LogicalChannel>	IMetadata.loadChannelAcquisitionData(java.util.Set<java.lang.Long> ids) Loads the logical channels and the acquisition metadata related to them.
<T extends IObject> java.util.Set<IObject>	IContainer.loadContainerHierarchy(java.lang.Class<T> rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options) Retrieves hierarchy trees rooted by a given node (unless orphan is specified -- See below) This method also retrieves the Experimenters linked to the objects in the tree.
java.util.Map<java.lang.Long,java.util.Set<IObject>>	IMetadata.loadLogFiles(java.lang.Class<? extends IObject> rootNodeType, java.util.Set<java.lang.Long> ids) Find the original file IDs for the import logs corresponding to the given Image or Fileset IDs.
<A extends Annotation> java.util.Set<A>	IMetadata.loadSpecifiedAnnotations(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, Parameters options) Loads all the annotations of a given type.
<A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	IMetadata.loadSpecifiedAnnotationsLinkedTo(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, java.lang.Class rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options) Loads the annotations of a given type linked to the specified objects.
<A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	IMetadata.loadSpecifiedAnnotationsLinkedTo(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, java.lang.Class rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options) Loads the annotations of a given type linked to the specified objects.
<A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	IMetadata.loadSpecifiedAnnotationsLinkedTo(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, java.lang.Class rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options) Loads the annotations of a given type linked to the specified objects.
java.util.Map<java.lang.Long,java.util.Set<IObject>>	IMetadata.loadTagContent(java.util.Set<java.lang.Long> tagIds, Parameters options) Loads the Tag Set if the id is specified otherwise loads all the Tag Set.
Experimenter	IAdmin.lookupExperimenter(java.lang.String omeName) look up an Experimenter and all related groups by name.
ExperimenterGroup	IAdmin.lookupGroup(java.lang.String groupName) look up an ExperimenterGroup and all contained users by name.
void	IShare.notifyMembersOfShare(long shareId, java.lang.String subject, java.lang.String message, boolean html) Deprecated. Notify via email selected members of share.
void	IShare.notifyMembersOfShare(long shareId, java.lang.String subject, java.lang.String message, boolean html) Deprecated. Notify via email selected members of share.
void	IShare.notifyMembersOfShare(long shareId, java.lang.String subject, java.lang.String message, boolean html) Deprecated. Notify via email selected members of share.
java.util.List<java.lang.Object[]>	IQuery.projection(java.lang.String query, Parameters parameters) Return a list of Java Object instances (not IObject instances).
<T extends IObject> T	IQuery.refresh(T iObject) refreshes an entire IObject graph, recursive loading all data for the managed instances in the graph from the database.
void	IAdmin.removeGroupOwners(ExperimenterGroup group, Experimenter... owner) removes the given users from the owner list for this group.
void	IAdmin.removeGroupOwners(ExperimenterGroup group, Experimenter... owner) removes the given users from the owner list for this group.
void	IAdmin.removeGroups(Experimenter user, ExperimenterGroup... groups) Removes an experimenter from the given groups.
void	IAdmin.removeGroups(Experimenter user, ExperimenterGroup... groups) Removes an experimenter from the given groups.
<T extends IObject> void	IShare.removeObject(long shareId, T object) Deprecated. Removes existing object from the share.
<T extends IObject> void	IShare.removeObjects(long shareId, T... objects) Deprecated. Remove existing items from the share.
void	IRenderingSettings.resetDefaults(RenderingDef def, Pixels pixels) Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.
void	IRenderingSettings.resetDefaults(RenderingDef def, Pixels pixels) Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.
<T extends IObject> java.util.Set<java.lang.Long>	IRenderingSettings.resetDefaultsByOwnerInSet(java.lang.Class<T> type, java.util.Set<java.lang.Long> nodeIds) Resets the rendering settings of a given group of containers based on the owner's (essentially a copy).
void	IRenderingSettings.resetDefaultsForPixels(long pixelsId) Resets a Pixels' default rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.
java.util.Set<java.lang.Long>	IRenderingSettings.resetDefaultsInDataset(long dataSetId) Resets a dataset's rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.
void	IRenderingSettings.resetDefaultsInImage(long imageId) Resets an image's default rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.
<T extends IObject> java.util.Set<java.lang.Long>	IRenderingSettings.resetDefaultsInSet(java.lang.Class<T> type, java.util.Set<java.lang.Long> nodeIds) Resets a rendering settings back to one or many containers that are specified by the rendering engine intelligent pretty good image (PG) logic.
RenderingDef	IRenderingSettings.resetDefaultsNoSave(RenderingDef def, Pixels pixels) Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.
RenderingDef	IRenderingSettings.resetDefaultsNoSave(RenderingDef def, Pixels pixels) Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.
<T extends IObject> java.util.Set<java.lang.Long>	IRenderingSettings.resetMinMaxInSet(java.lang.Class<T> type, java.util.Set<java.lang.Long> nodeIds) Resets a the channel windows for one or many containers back to their global minimum and global maximum for the channel.
java.util.Collection	IContainer.retrieveCollection(IObject dataObject, java.lang.String collectionName, Parameters options) Retrieves a collection with all members initialized ("loaded").
java.util.Collection	IContainer.retrieveCollection(IObject dataObject, java.lang.String collectionName, Parameters options) Retrieves a collection with all members initialized ("loaded").
java.util.List<Experimenter>	ILdap.searchByAttribute(java.lang.String dn, java.lang.String attribute, java.lang.String value) Searches all Experimenter in LDAP for specified attribute
java.util.List<Experimenter>	ILdap.searchByAttribute(java.lang.String dn, java.lang.String attribute, java.lang.String value) Searches all Experimenter in LDAP for specified attribute
java.util.List<Experimenter>	ILdap.searchByAttribute(java.lang.String dn, java.lang.String attribute, java.lang.String value) Searches all Experimenter in LDAP for specified attribute
java.util.List<Experimenter>	ILdap.searchByAttributes(java.lang.String dn, java.lang.String[] attributes, java.lang.String[] values) Searches all Experimenter in LDAP for specified attributes.
java.util.List<Experimenter>	ILdap.searchByAttributes(java.lang.String dn, java.lang.String[] attributes, java.lang.String[] values) Searches all Experimenter in LDAP for specified attributes.
java.util.List<Experimenter>	ILdap.searchByAttributes(java.lang.String dn, java.lang.String[] attributes, java.lang.String[] values) Searches all Experimenter in LDAP for specified attributes.
Experimenter	ILdap.searchByDN(java.lang.String userdn) Searches one Experimenter in LDAP for specified Distinguished Name - String
java.util.List<java.lang.String>	ILdap.searchDnInGroups(java.lang.String attr, java.lang.String value) Searches Distinguished Name - String in groups
java.util.List<java.lang.String>	ILdap.searchDnInGroups(java.lang.String attr, java.lang.String value) Searches Distinguished Name - String in groups
void	IAdmin.setAdminPrivileges(Experimenter user, java.util.List<AdminPrivilege> privileges) Sets the set of light administrator privileges for the given user.
void	IAdmin.setAdminPrivileges(Experimenter user, java.util.List<AdminPrivilege> privileges) Sets the set of light administrator privileges for the given user.
void	IConfig.setConfigValue(java.lang.String key, java.lang.String value) set a configuration value in the backend store.
boolean	IConfig.setConfigValueIfEquals(java.lang.String key, java.lang.String value, java.lang.String test) Calls IConfig.setConfigValue(String, String) if and only if the configuration property is currently equal to the test argument.
void	IAdmin.setDefaultGroup(Experimenter user, ExperimenterGroup group) sets the default group for a given user.
void	IAdmin.setDefaultGroup(Experimenter user, ExperimenterGroup group) sets the default group for a given user.
void	ILdap.setDN(java.lang.Long experimenterID, java.lang.String dn) Deprecated. As of release 5.1, relevant model objects have the "ldap" property added to their state.
void	ILdap.setDN(java.lang.Long experimenterID, java.lang.String dn) Deprecated. As of release 5.1, relevant model objects have the "ldap" property added to their state.
void	IAdmin.setGroupOwner(ExperimenterGroup group, Experimenter owner) adds the user to the owner list for this group.
void	IAdmin.setGroupOwner(ExperimenterGroup group, Experimenter owner) adds the user to the owner list for this group.
void	IRenderingSettings.setOriginalSettingsForPixels(long pixelsId) Resets an Pixels' default rendering settings back to channel global minimum and maximum.
java.util.Set<java.lang.Long>	IRenderingSettings.setOriginalSettingsInDataset(long datasetId) Resets a dataset's rendering settings back to channel global minimum and maximum.
void	IRenderingSettings.setOriginalSettingsInImage(long imageId) Resets an image's default rendering settings back to channel global minimum and maximum.
<T extends IObject> java.util.Set<java.lang.Long>	IRenderingSettings.setOriginalSettingsInSet(java.lang.Class<T> type, java.util.Set<java.lang.Long> nodeIds) Resets a rendering settings back to channel global minimum and maximum for the specified containers.
java.lang.String	JobHandle.setStatusAndMessage(java.lang.String status, java.lang.String message) Like JobHandle.setStatus(String) but also sets the message.
long	JobHandle.submit(Job job) Submits a Job and returns its database id.
void	IContainer.unlink(ILink[] dataObjectLinks, Parameters options) Removes links between OmeroDataObjects e.g Project-Dataset, Dataset-Image Note that the objects themselves aren't deleted, only the Link objects.
void	IAdmin.unsetGroupOwner(ExperimenterGroup group, Experimenter owner) removes the user from the owner list for this group.
void	IAdmin.unsetGroupOwner(ExperimenterGroup group, Experimenter owner) removes the user from the owner list for this group.
<T extends IObject> T	IContainer.updateDataObject(T dataObject, Parameters options) Updates a data object.
IObject[]	IContainer.updateDataObjects(IObject[] dataObjects, Parameters options) convenience method to save network calls.
<T extends IEnum> T	ITypes.updateEnumeration(T oEnum) updates enumeration value specified by object
<T extends IEnum> void	ITypes.updateEnumerations(java.util.List<T> listEnum) updates enumeration value specified by object
void	IAdmin.updateExperimenter(Experimenter experimenter) Updates an experimenter if admin or owner of group.
void	IAdmin.updateExperimenterWithPassword(Experimenter experimenter, java.lang.String password) Updates an experimenter if admin or owner of group.
void	IAdmin.updateGroup(ExperimenterGroup group) Updates an experimenter group if admin or owner of group.
void	IAdmin.updateSelf(Experimenter experimenter) Allows a user to update his/her own information.

Uses of NotNull in ome.logic

Method parameters in ome.logic with annotations of type NotNull

Modifier and Type	Method and Description
java.lang.Long	MetadataImpl.countAnnotationsUsedNotOwned(java.lang.Class annotationType, long userID)
java.lang.Long	MetadataImpl.countSpecifiedAnnotations(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, Parameters options)
RenderingDef	RenderingSettingsImpl.createNewRenderingDef(Pixels pixels) Implemented as specified by the IRenderingSettings I/F
ExperimenterGroup	AdminImpl.getDefaultGroup(long experimenterId)
java.util.Map	MetadataImpl.getTaggedObjectsCount(java.util.Set<java.lang.Long> tagIds, Parameters options)
<A extends Annotation> java.util.Set<A>	MetadataImpl.loadAnnotation(java.util.Set<java.lang.Long> annotationIds)
java.util.Set<IObject>	MetadataImpl.loadAnnotationsUsedNotOwned(java.lang.Class annotationType, long userID)
java.util.Set	MetadataImpl.loadChannelAcquisitionData(java.util.Set<java.lang.Long> ids)
java.util.Map<java.lang.Long,java.util.Set<IObject>>	MetadataImpl.loadLogFiles(java.lang.Class<? extends IObject> rootNodeType, java.util.Set<java.lang.Long> ids)
<A extends Annotation> java.util.Set<A>	MetadataImpl.loadSpecifiedAnnotations(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, Parameters options)
<A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	MetadataImpl.loadSpecifiedAnnotationsLinkedTo(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, java.lang.Class rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options)
<A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	MetadataImpl.loadSpecifiedAnnotationsLinkedTo(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, java.lang.Class rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options)
<A extends Annotation> java.util.Map<java.lang.Long,java.util.Set<A>>	MetadataImpl.loadSpecifiedAnnotationsLinkedTo(java.lang.Class type, java.util.Set<java.lang.String> include, java.util.Set<java.lang.String> exclude, java.lang.Class rootNodeType, java.util.Set<java.lang.Long> rootNodeIds, Parameters options)
java.util.Map<java.lang.Long,java.util.Set<IObject>>	MetadataImpl.loadTagContent(java.util.Set<java.lang.Long> tagIds, Parameters options)
void	AdminImpl.updateExperimenter(Experimenter experimenter)
void	AdminImpl.updateExperimenterWithPassword(Experimenter experimenter, java.lang.String password)
void	AdminImpl.updateGroup(ExperimenterGroup group)
void	AdminImpl.updateSelf(Experimenter e)

Uses of NotNull in ome.services.sessions

Method parameters in ome.services.sessions with annotations of type NotNull

Modifier and Type	Method and Description
int	SessionBean.closeSession(Session session)
Session	SessionBean.createSession(Principal principal, java.lang.String credentials)
Session	SessionBean.createSessionWithTimeout(Principal principal, long milliseconds)
Session	SessionBean.createSessionWithTimeouts(Principal principal, long timeToLiveMilliseconds, long timeToIdleMilliseconds)
int	SessionBean.getReferenceCount(java.lang.String sessionUuid)
Session	SessionBean.getSession(java.lang.String sessionUuid)
Session	SessionBean.updateSession(Session session)

Uses of NotNull in ome.services.sharing

Method parameters in ome.services.sharing with annotations of type NotNull

Modifier and Type	Method and Description
CommentAnnotation	ShareBean.addComment(long shareId, java.lang.String commentText)
<T extends IObject> void	ShareBean.addObject(long shareId, T object)
<T extends IObject> void	ShareBean.addObjects(long shareId, T... objects)
CommentAnnotation	ShareBean.addReply(long shareId, java.lang.String comment, CommentAnnotation replyTo)
CommentAnnotation	ShareBean.addReply(long shareId, java.lang.String comment, CommentAnnotation replyTo)
<T extends IObject> long	ShareBean.createShare(java.lang.String description, java.sql.Timestamp expiration, java.util.List<T> items, java.util.List<Experimenter> exps, java.util.List<java.lang.String> guests, boolean enabled)
void	ShareBean.deleteComment(Annotation comment)
java.util.Set<Session>	ShareBean.getMemberSharesFor(Experimenter user, boolean active)
java.util.Set<Session>	ShareBean.getSharesOwnedBy(Experimenter user, boolean active)
<T extends IObject> void	ShareBean.removeObject(long shareId, T object)
<T extends IObject> void	ShareBean.removeObjects(long shareId, T... objects)