Package | Description |
---|---|
ome.model |
Central interfaces in the Omero object model.
|
ome.model.acquisition | |
ome.model.annotations | |
ome.model.containers | |
ome.model.core | |
ome.model.display | |
ome.model.enums | |
ome.model.experiment | |
ome.model.fs | |
ome.model.internal |
Contains non-code-generated model objects.
|
ome.model.jobs | |
ome.model.meta | |
ome.model.roi | |
ome.model.screen | |
ome.model.stats | |
ome.model.units | |
ome.tools.hibernate |
Hibernate specific tools for the OMERO Server
Classes/Interfaces that implement Hibernate method mechanics for the OMERO server
Related Documentation
For more information, please see:
TODO
|
ome.util |
Utilities for all of OMERO.
|
omero.model | |
omero.util |
Modifier and Type | Interface and Description |
---|---|
interface |
IAnnotated |
interface |
IAnnotationLink
extension of
ILink for marking links whose child field is
an Annotation . |
interface |
IEnum
interface for all domain enumarations.
|
interface |
IGlobal
marker interface for all global types, which have no
IDetails fields
other than permissions. |
interface |
ILink
extension of
IObject for building object hierarchies. |
interface |
IMutable
interface for all mutable domain objects.
|
interface |
IObject
central model interface.
|
Modifier and Type | Method and Description |
---|---|
Filterable |
ModelBased.fillObject(ReverseModelMapper mapper) |
Modifier and Type | Method and Description |
---|---|
void |
ModelBased.copyObject(Filterable model,
ModelMapper mapper) |
Modifier and Type | Class and Description |
---|---|
class |
Arc |
class |
Detector
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Detector.Details |
class |
DetectorSettings
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
DetectorSettings.Details |
class |
Dichroic
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Dichroic.Details |
class |
Filament |
class |
Filter
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Filter.Details |
class |
FilterSet
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilterSet.Details |
class |
FilterSetEmissionFilterLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilterSetEmissionFilterLink.Details |
class |
FilterSetExcitationFilterLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilterSetExcitationFilterLink.Details |
class |
GenericExcitationSource |
class |
ImagingEnvironment
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ImagingEnvironment.Details |
class |
Instrument
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Instrument.Details |
class |
Laser |
class |
LightEmittingDiode |
class |
LightPath
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightPath.Details |
class |
LightPathEmissionFilterLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightPathEmissionFilterLink.Details |
class |
LightPathExcitationFilterLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightPathExcitationFilterLink.Details |
class |
LightSettings
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightSettings.Details |
class |
LightSource
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightSource.Details |
class |
Microscope
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Microscope.Details |
class |
Objective
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Objective.Details |
class |
ObjectiveSettings
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ObjectiveSettings.Details |
class |
OTF
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
OTF.Details |
class |
StageLabel
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
StageLabel.Details |
class |
TransmittanceRange
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
TransmittanceRange.Details |
Modifier and Type | Class and Description |
---|---|
class |
Annotation
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Annotation.Details |
class |
AnnotationAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
AnnotationAnnotationLink.Details |
class |
BasicAnnotation |
class |
BooleanAnnotation |
class |
ChannelAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ChannelAnnotationLink.Details |
class |
CommentAnnotation |
class |
DatasetAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
DatasetAnnotationLink.Details |
class |
DetectorAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
DetectorAnnotationLink.Details |
class |
DichroicAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
DichroicAnnotationLink.Details |
class |
DoubleAnnotation |
class |
ExperimenterAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ExperimenterAnnotationLink.Details |
class |
ExperimenterGroupAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ExperimenterGroupAnnotationLink.Details |
class |
FileAnnotation |
class |
FilesetAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilesetAnnotationLink.Details |
class |
FilterAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilterAnnotationLink.Details |
class |
ImageAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ImageAnnotationLink.Details |
class |
InstrumentAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
InstrumentAnnotationLink.Details |
class |
LightPathAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightPathAnnotationLink.Details |
class |
LightSourceAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LightSourceAnnotationLink.Details |
class |
ListAnnotation |
class |
LongAnnotation |
class |
MapAnnotation |
class |
NamespaceAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
NamespaceAnnotationLink.Details |
class |
NodeAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
NodeAnnotationLink.Details |
class |
NumericAnnotation |
class |
ObjectiveAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ObjectiveAnnotationLink.Details |
class |
OriginalFileAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
OriginalFileAnnotationLink.Details |
class |
PlaneInfoAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
PlaneInfoAnnotationLink.Details |
class |
PlateAcquisitionAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
PlateAcquisitionAnnotationLink.Details |
class |
PlateAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
PlateAnnotationLink.Details |
class |
ProjectAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ProjectAnnotationLink.Details |
class |
ReagentAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ReagentAnnotationLink.Details |
class |
RoiAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
RoiAnnotationLink.Details |
class |
ScreenAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ScreenAnnotationLink.Details |
class |
SessionAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
SessionAnnotationLink.Details |
class |
ShapeAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ShapeAnnotationLink.Details |
class |
TagAnnotation |
class |
TermAnnotation |
class |
TextAnnotation |
class |
TimestampAnnotation |
class |
TypeAnnotation |
class |
WellAnnotationLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
WellAnnotationLink.Details |
class |
XmlAnnotation |
Modifier and Type | Class and Description |
---|---|
class |
Dataset
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Dataset.Details |
class |
DatasetImageLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
DatasetImageLink.Details |
class |
Project
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Project.Details |
class |
ProjectDatasetLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ProjectDatasetLink.Details |
Modifier and Type | Class and Description |
---|---|
class |
Channel
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Channel.Details |
class |
Image
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Image.Details |
class |
LogicalChannel
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
LogicalChannel.Details |
class |
OriginalFile
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
OriginalFile.Details |
class |
Pixels
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Pixels.Details |
class |
PixelsOriginalFileMap
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
PixelsOriginalFileMap.Details |
class |
PlaneInfo
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
PlaneInfo.Details |
Modifier and Type | Class and Description |
---|---|
class |
ChannelBinding
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ChannelBinding.Details |
class |
CodomainMapContext
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
CodomainMapContext.Details |
class |
ContrastStretchingContext |
class |
PlaneSlicingContext |
class |
QuantumDef
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
QuantumDef.Details |
class |
RenderingDef
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
RenderingDef.Details |
class |
ReverseIntensityContext |
class |
Thumbnail
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Thumbnail.Details |
Modifier and Type | Class and Description |
---|---|
class |
Experiment
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Experiment.Details |
class |
MicrobeamManipulation
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
MicrobeamManipulation.Details |
Modifier and Type | Class and Description |
---|---|
class |
Fileset
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Fileset.Details |
class |
FilesetEntry
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilesetEntry.Details |
class |
FilesetJobLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
FilesetJobLink.Details |
Modifier and Type | Class and Description |
---|---|
class |
Details
value type for low-level (row-level) details for all
IObject objects. |
class |
Link
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Link.Details |
Modifier and Type | Class and Description |
---|---|
class |
ImportJob |
class |
IndexingJob |
class |
IntegrityCheckJob |
class |
Job
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Job.Details |
class |
JobOriginalFileLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
JobOriginalFileLink.Details |
class |
JobStatus |
static class |
JobStatus.Details |
class |
MetadataImportJob |
class |
ParseJob |
class |
PixelDataJob |
class |
ScriptJob |
class |
ThumbnailGenerationJob |
class |
UploadJob |
Modifier and Type | Class and Description |
---|---|
class |
DBPatch |
static class |
DBPatch.Details |
class |
Event |
static class |
Event.Details |
class |
EventLog |
static class |
EventLog.Details |
class |
Experimenter |
static class |
Experimenter.Details |
class |
ExperimenterGroup |
static class |
ExperimenterGroup.Details |
class |
ExternalInfo
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ExternalInfo.Details |
class |
GroupExperimenterMap |
static class |
GroupExperimenterMap.Details |
class |
Namespace |
static class |
Namespace.Details |
class |
Node |
static class |
Node.Details |
class |
Session |
static class |
Session.Details |
class |
Share |
class |
ShareMember |
static class |
ShareMember.Details |
Modifier and Type | Class and Description |
---|---|
class |
Ellipse |
class |
Label |
class |
Line |
class |
Mask |
class |
Path |
class |
Point |
class |
Polygon |
class |
Polyline |
class |
Rectangle |
class |
Roi
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Roi.Details |
class |
Shape
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Shape.Details |
Modifier and Type | Class and Description |
---|---|
class |
Plate
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Plate.Details |
class |
PlateAcquisition
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
PlateAcquisition.Details |
class |
Reagent
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Reagent.Details |
class |
Screen
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Screen.Details |
class |
ScreenPlateLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
ScreenPlateLink.Details |
class |
Well
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
Well.Details |
class |
WellReagentLink
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
WellReagentLink.Details |
class |
WellSample
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
WellSample.Details |
Modifier and Type | Class and Description |
---|---|
class |
StatsInfo
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
|
static class |
StatsInfo.Details |
Modifier and Type | Class and Description |
---|---|
class |
ElectricPotential
class storing both a ElectricPotential and a unit for that ElectricPotential
(e.g. m, in, ly, etc.) encapsulated in a
UnitsElectricPotential instance. |
class |
Frequency
class storing both a Frequency and a unit for that Frequency
(e.g. m, in, ly, etc.) encapsulated in a
UnitsFrequency instance. |
class |
Length
class storing both a Length and a unit for that Length
(e.g. m, in, ly, etc.) encapsulated in a
UnitsLength instance. |
class |
Power
class storing both a Power and a unit for that Power
(e.g. m, in, ly, etc.) encapsulated in a
UnitsPower instance. |
class |
Pressure
class storing both a Pressure and a unit for that Pressure
(e.g. m, in, ly, etc.) encapsulated in a
UnitsPressure instance. |
class |
Temperature
class storing both a Temperature and a unit for that Temperature
(e.g. m, in, ly, etc.) encapsulated in a
UnitsTemperature instance. |
class |
Time
class storing both a Time and a unit for that Time
(e.g. m, in, ly, etc.) encapsulated in a
UnitsTime instance. |
Modifier and Type | Method and Description |
---|---|
Filterable |
ProxyCleanupFilter.filter(String fieldId,
Filterable f) |
Filterable |
ReloadFilter.filter(String fieldId,
Filterable f) |
Filterable |
UpdateFilter.filter(String fieldId,
Filterable f)
overrides
ContextFilter.filter(String, Filterable) to return
previously merged or previously checked items. |
Modifier and Type | Method and Description |
---|---|
protected void |
ProxySafeFilter.doFilter(String fieldId,
Filterable f) |
Filterable |
ProxyCleanupFilter.filter(String fieldId,
Filterable f) |
Filterable |
ReloadFilter.filter(String fieldId,
Filterable f) |
Filterable |
UpdateFilter.filter(String fieldId,
Filterable f)
overrides
ContextFilter.filter(String, Filterable) to return
previously merged or previously checked items. |
Modifier and Type | Class and Description |
---|---|
class |
PermDetails
wrapper class which can be used in HQL queries to properly load
the full context for a permissions object.
|
Modifier and Type | Method and Description |
---|---|
Filterable |
ContextFilter.filter(String fieldId,
Filterable f) |
Filterable |
Filter.filter(String fieldId,
Filterable f) |
Filterable |
ModelMapper.filter(String fieldId,
Filterable source) |
Filterable |
RdfPrinter.filter(String fieldId,
Filterable f) |
Filterable |
ReverseModelMapper.reverse(ModelBased source) |
Modifier and Type | Method and Description |
---|---|
protected void |
ContextFilter.doFilter(String fieldId,
Filterable f) |
Filterable |
ContextFilter.filter(String fieldId,
Filterable f) |
Filterable |
Filter.filter(String fieldId,
Filterable f) |
Filterable |
ModelMapper.filter(String fieldId,
Filterable source) |
Filterable |
RdfPrinter.filter(String fieldId,
Filterable f) |
ModelBased |
ModelMapper.map(Filterable source) |
Modifier and Type | Method and Description |
---|---|
Filterable |
DetailsI.fillObject(ReverseModelMapper _mapper) |
Filterable |
ElectricPotentialI.fillObject(ReverseModelMapper mapper) |
Filterable |
FrequencyI.fillObject(ReverseModelMapper mapper) |
Filterable |
LengthI.fillObject(ReverseModelMapper mapper) |
Filterable |
PermissionsI.fillObject(ReverseModelMapper _mapper) |
Filterable |
PowerI.fillObject(ReverseModelMapper mapper) |
Filterable |
PressureI.fillObject(ReverseModelMapper mapper) |
Filterable |
TemperatureI.fillObject(ReverseModelMapper mapper) |
Filterable |
TimeI.fillObject(ReverseModelMapper mapper) |
Modifier and Type | Method and Description |
---|---|
void |
DetailsI.copyObject(Filterable model,
ModelMapper _mapper) |
void |
ElectricPotentialI.copyObject(Filterable model,
ModelMapper mapper) |
void |
FrequencyI.copyObject(Filterable model,
ModelMapper mapper) |
void |
LengthI.copyObject(Filterable model,
ModelMapper mapper) |
void |
PermissionsI.copyObject(Filterable model,
ModelMapper _mapper) |
void |
PowerI.copyObject(Filterable model,
ModelMapper mapper) |
void |
PressureI.copyObject(Filterable model,
ModelMapper mapper) |
void |
TemperatureI.copyObject(Filterable model,
ModelMapper mapper) |
void |
TimeI.copyObject(Filterable model,
ModelMapper mapper) |
Modifier and Type | Method and Description |
---|---|
Filterable |
IceMapper.filter(String fieldId,
Filterable source) |
Filterable |
IceMapper.reverse(ModelBased source)
Copied from
ReverseModelMapper . |
Modifier and Type | Method and Description |
---|---|
Filterable |
IceMapper.filter(String fieldId,
Filterable source) |
List |
IceMapper.map(Filterable[] array) |
Version: 5.2.0-ice35-b12
Copyright © 2015 The University of Dundee & Open Microscopy Environment. All Rights Reserved.