| ome.annotations |
Runtime source annotation package for the OMERO server
This includes classes that annotate source code and check metadata at runtime
for server API calls.
|
| ome.api.local |
Non-client service API for OMERO
This includes interfaces for the local administration of the OMERO server.
|
| ome.io.bioformats |
|
| ome.io.messages |
|
| ome.io.nio |
New Input/Output handling for the OMERO server
This includes interfaces/classes for the input and output handling of data within
the OMERO server.
|
| ome.logic |
The central repository of implementations which will be accessible through this server.
|
| ome.security |
JBoss and OMERO security handling
This includes classes that provide security for the execution and usage of the OMERO server on
a JBoss platform.
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| ome.security.auth |
|
| ome.security.auth.providers |
|
| ome.security.basic |
Basic OMERO security contextual classes
Basic classes that provide security context objects necessary to secure the implementation of
the OMERO server on a JBoss platform.
|
| ome.security.policy |
Extensible service and security policies which can influence
whether a user, group, or other agent can perform a certain
action.
|
| ome.security.sharing |
|
| ome.services |
Base services package for OMERO API services
This includes classes that implement OMERO API services described as interfaces in the
OMERO Common component.
|
| ome.services.db |
|
| ome.services.delete |
Implementations of the ome.api.IDelete service.
|
| ome.services.delete.files |
|
| ome.services.eventlogs |
|
| ome.services.formats |
|
| ome.services.fulltext |
All necessary classes for background indexing of metadata and attached binary
files.
|
| ome.services.fulltext.bridges |
Custom FieldBridge implementations which can be configured to be run on each
indexing activity.
|
| ome.services.graphs |
Server classes for handling complicated graphs of model objects.
|
| ome.services.mail |
General mail services.
|
| ome.services.messages |
Message implementations used throughout the server for internal communication.
|
| ome.services.messages.stats |
|
| ome.services.pixeldata |
|
| ome.services.procs |
Internal process and process management
This includes interfaces and classes that provide thread process management for internal
processes critical to the operation of the OMERO server.
|
| ome.services.procs.scripts |
Script processor infrastructure.
|
| ome.services.projection |
|
| ome.services.query |
facilitates the creation of Hibernate Queries and Criteria.
|
| ome.services.roi |
|
| ome.services.scheduler |
|
| ome.services.scripts |
|
| ome.services.search |
Internal search implementation classes.
|
| ome.services.sessions |
|
| ome.services.sessions.events |
|
| ome.services.sessions.state |
|
| ome.services.sessions.stats |
|
| ome.services.sharing |
ome.api.IShare support infrastructure.
|
| ome.services.throttling |
|
| ome.services.util |
Helper classes to support OMERO service beans
Instead of abstract classes, IOC methods and dependency injection is used to provide service
interception for the Service (binary) bean classes.
|
| ome.tools |
OMERO Server Utility and Spring/Hibernate Tools
Classes/Interfaces that implement File, Hibernate, Spring, Annotation, Hierarchy, etc. method
mechanics for the OMERO server
Related Documentation
For more information, please see:
TODO
|
| ome.tools.hibernate |
Hibernate specific tools for the OMERO Server
Classes/Interfaces that implement Hibernate method mechanics for the OMERO server
Related Documentation
For more information, please see:
TODO
|
| ome.tools.lsid |
Life Science Identifier (LSID) tools
Classes/Interfaces that manage conversions and creation of LSID unique identifiers
Related Documentation
For more information, please see:
TODO
|
| ome.tools.spring |
OMERO Server tools specific to Spring
Classes/Interfaces that implement AOP, Post-processing injection, session flushing,
and factory management.
|
