Package | Description |
---|---|
ome.model |
Central interfaces in the Omero object model.
|
ome.model.acquisition | |
ome.model.annotations | |
ome.model.containers | |
ome.model.core | |
ome.model.display | |
ome.model.experiment | |
ome.model.fs | |
ome.model.jobs | |
ome.model.meta | |
ome.model.roi | |
ome.model.screen | |
ome.tools |
OMERO Server Utility and Spring/Hibernate Tools
Classes/Interfaces that implement File, Hibernate, Spring, Annotation, Hierarchy, etc. method
mechanics for the OMERO server
Related Documentation
For more information, please see:
TODO
|
ome.util |
Utilities for all of OMERO.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
IAnnotated.collectAnnotationLinks(CBlock<E> block) |
<E> List<E> |
IAnnotated.eachLinkedAnnotation(CBlock<E> block) |
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Detector.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.DetectorAnnotationLink while
collecting the results.
|
<E> List<E> |
Dichroic.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.DichroicAnnotationLink while
collecting the results.
|
<E> List<E> |
Filter.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.FilterAnnotationLink while
collecting the results.
|
<E> List<E> |
Instrument.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.InstrumentAnnotationLink while
collecting the results.
|
<E> List<E> |
LightPath.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.LightPathAnnotationLink while
collecting the results.
|
<E> List<E> |
LightSource.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.LightSourceAnnotationLink while
collecting the results.
|
<E> List<E> |
Objective.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ObjectiveAnnotationLink while
collecting the results.
|
<E> List<E> |
Instrument.collectDetector(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Detector while
collecting the results.
|
<E> List<E> |
Instrument.collectDichroic(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Dichroic while
collecting the results.
|
<E> List<E> |
Filter.collectEmissionFilterLink(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetEmissionFilterLink while
collecting the results.
|
<E> List<E> |
FilterSet.collectEmissionFilterLink(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetEmissionFilterLink while
collecting the results.
|
<E> List<E> |
LightPath.collectEmissionFilterLink(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.LightPathEmissionFilterLink while
collecting the results.
|
<E> List<E> |
Filter.collectExcitationFilterLink(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetExcitationFilterLink while
collecting the results.
|
<E> List<E> |
FilterSet.collectExcitationFilterLink(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetExcitationFilterLink while
collecting the results.
|
<E> List<E> |
LightPath.collectExcitationFilterLink(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.LightPathExcitationFilterLink while
collecting the results.
|
<E> List<E> |
Instrument.collectFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Filter while
collecting the results.
|
<E> List<E> |
Instrument.collectFilterSet(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSet while
collecting the results.
|
<E> List<E> |
Instrument.collectLightSource(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.LightSource while
collecting the results.
|
<E> List<E> |
Instrument.collectObjective(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Objective while
collecting the results.
|
<E> List<E> |
Instrument.collectOtf(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.OTF while
collecting the results.
|
<E> List<E> |
Detector.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Dichroic.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Filter.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Instrument.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
LightPath.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
LightSource.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Objective.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Filter.eachLinkedEmissionFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSet while
collecting the results.
|
<E> List<E> |
FilterSet.eachLinkedEmissionFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Filter while
collecting the results.
|
<E> List<E> |
LightPath.eachLinkedEmissionFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Filter while
collecting the results.
|
<E> List<E> |
Filter.eachLinkedExcitationFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.FilterSet while
collecting the results.
|
<E> List<E> |
FilterSet.eachLinkedExcitationFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Filter while
collecting the results.
|
<E> List<E> |
LightPath.eachLinkedExcitationFilter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.Filter while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Annotation.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.AnnotationAnnotationLink while
collecting the results.
|
<E> List<E> |
Annotation.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Dataset.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.DatasetAnnotationLink while
collecting the results.
|
<E> List<E> |
Project.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ProjectAnnotationLink while
collecting the results.
|
<E> List<E> |
Project.collectDatasetLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.ProjectDatasetLink while
collecting the results.
|
<E> List<E> |
Dataset.collectImageLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.DatasetImageLink while
collecting the results.
|
<E> List<E> |
Dataset.collectProjectLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.ProjectDatasetLink while
collecting the results.
|
<E> List<E> |
Dataset.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Project.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Project.eachLinkedDataset(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.Dataset while
collecting the results.
|
<E> List<E> |
Dataset.eachLinkedImage(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.Image while
collecting the results.
|
<E> List<E> |
Dataset.eachLinkedProject(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.Project while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Channel.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ChannelAnnotationLink while
collecting the results.
|
<E> List<E> |
Image.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ImageAnnotationLink while
collecting the results.
|
<E> List<E> |
OriginalFile.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.OriginalFileAnnotationLink while
collecting the results.
|
<E> List<E> |
PlaneInfo.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.PlaneInfoAnnotationLink while
collecting the results.
|
<E> List<E> |
LogicalChannel.collectChannels(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.Channel while
collecting the results.
|
<E> List<E> |
Pixels.collectChannels(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.Channel while
collecting the results.
|
<E> List<E> |
Image.collectDatasetLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.DatasetImageLink while
collecting the results.
|
<E> List<E> |
OriginalFile.collectFilesetEntries(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.fs.FilesetEntry while
collecting the results.
|
<E> List<E> |
Image.collectPixels(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.Pixels while
collecting the results.
|
<E> List<E> |
OriginalFile.collectPixelsFileMaps(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.PixelsOriginalFileMap while
collecting the results.
|
<E> List<E> |
Pixels.collectPixelsFileMaps(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.PixelsOriginalFileMap while
collecting the results.
|
<E> List<E> |
Pixels.collectPlaneInfo(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.PlaneInfo while
collecting the results.
|
<E> List<E> |
Image.collectRois(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.roi.Roi while
collecting the results.
|
<E> List<E> |
Pixels.collectSettings(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.display.RenderingDef while
collecting the results.
|
<E> List<E> |
Pixels.collectThumbnails(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.display.Thumbnail while
collecting the results.
|
<E> List<E> |
Image.collectWellSamples(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.WellSample while
collecting the results.
|
<E> List<E> |
Channel.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Image.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
OriginalFile.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
PlaneInfo.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Image.eachLinkedDataset(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.containers.Dataset while
collecting the results.
|
<E> List<E> |
Pixels.eachLinkedOriginalFile(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.OriginalFile while
collecting the results.
|
<E> List<E> |
OriginalFile.eachLinkedPixels(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.Pixels while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
RenderingDef.collectSpatialDomainEnhancement(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.display.CodomainMapContext while
collecting the results.
|
<E> List<E> |
RenderingDef.collectWaveRendering(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.display.ChannelBinding while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
MicrobeamManipulation.collectLightSourceSettings(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.acquisition.LightSettings while
collecting the results.
|
<E> List<E> |
Experiment.collectMicrobeamManipulation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.experiment.MicrobeamManipulation while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Fileset.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.FilesetAnnotationLink while
collecting the results.
|
<E> List<E> |
Fileset.collectImages(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.Image while
collecting the results.
|
<E> List<E> |
Fileset.collectJobLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.fs.FilesetJobLink while
collecting the results.
|
<E> List<E> |
Fileset.collectUsedFiles(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.fs.FilesetEntry while
collecting the results.
|
<E> List<E> |
Fileset.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Fileset.eachLinkedJob(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.jobs.Job while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Job.collectOriginalFileLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.jobs.JobOriginalFileLink while
collecting the results.
|
<E> List<E> |
Job.eachLinkedOriginalFile(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.core.OriginalFile while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Experimenter.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ExperimenterAnnotationLink while
collecting the results.
|
<E> List<E> |
ExperimenterGroup.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ExperimenterGroupAnnotationLink while
collecting the results.
|
<E> List<E> |
Namespace.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.NamespaceAnnotationLink while
collecting the results.
|
<E> List<E> |
Node.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.NodeAnnotationLink while
collecting the results.
|
<E> List<E> |
Session.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.SessionAnnotationLink while
collecting the results.
|
<E> List<E> |
Session.collectEvents(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.Event while
collecting the results.
|
<E> List<E> |
Experimenter.collectGroupExperimenterMap(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.GroupExperimenterMap while
collecting the results.
|
<E> List<E> |
ExperimenterGroup.collectGroupExperimenterMap(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.GroupExperimenterMap while
collecting the results.
|
<E> List<E> |
Event.collectLogs(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.EventLog while
collecting the results.
|
<E> List<E> |
Node.collectSessions(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.Session while
collecting the results.
|
<E> List<E> |
Experimenter.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
ExperimenterGroup.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Namespace.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Node.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Session.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
ExperimenterGroup.eachLinkedExperimenter(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.Experimenter while
collecting the results.
|
<E> List<E> |
Experimenter.eachLinkedExperimenterGroup(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.meta.ExperimenterGroup while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Roi.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.RoiAnnotationLink while
collecting the results.
|
<E> List<E> |
Shape.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ShapeAnnotationLink while
collecting the results.
|
<E> List<E> |
Roi.collectShapes(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.roi.Shape while
collecting the results.
|
<E> List<E> |
Roi.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Shape.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
<E> List<E> |
Plate.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.PlateAnnotationLink while
collecting the results.
|
<E> List<E> |
PlateAcquisition.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.PlateAcquisitionAnnotationLink while
collecting the results.
|
<E> List<E> |
Reagent.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ReagentAnnotationLink while
collecting the results.
|
<E> List<E> |
Screen.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.ScreenAnnotationLink while
collecting the results.
|
<E> List<E> |
Well.collectAnnotationLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.WellAnnotationLink while
collecting the results.
|
<E> List<E> |
Plate.collectPlateAcquisitions(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.PlateAcquisition while
collecting the results.
|
<E> List<E> |
Screen.collectPlateLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.ScreenPlateLink while
collecting the results.
|
<E> List<E> |
Well.collectReagentLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.WellReagentLink while
collecting the results.
|
<E> List<E> |
Screen.collectReagents(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.Reagent while
collecting the results.
|
<E> List<E> |
Plate.collectScreenLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.ScreenPlateLink while
collecting the results.
|
<E> List<E> |
Reagent.collectWellLinks(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.WellReagentLink while
collecting the results.
|
<E> List<E> |
Plate.collectWells(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.Well while
collecting the results.
|
<E> List<E> |
PlateAcquisition.collectWellSample(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.WellSample while
collecting the results.
|
<E> List<E> |
Well.collectWellSamples(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.WellSample while
collecting the results.
|
<E> List<E> |
Plate.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
PlateAcquisition.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Reagent.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Screen.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Well.eachLinkedAnnotation(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.annotations.Annotation while
collecting the results.
|
<E> List<E> |
Screen.eachLinkedPlate(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.Plate while
collecting the results.
|
<E> List<E> |
Well.eachLinkedReagent(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.Reagent while
collecting the results.
|
<E> List<E> |
Plate.eachLinkedScreen(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.Screen while
collecting the results.
|
<E> List<E> |
Reagent.eachLinkedWell(CBlock<E> block)
takes a CBlock and calls the block once for each ome.model.screen.Well while
collecting the results.
|
Modifier and Type | Method and Description |
---|---|
static <T extends IObject> |
HierarchyTransformations.invertPDI(Set<Image> imagesAll,
CBlock<T> block) |
Modifier and Type | Class and Description |
---|---|
class |
IdBlock
|
Version: 5.2.0-ice35-b12
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