Package loci.formats.in
package loci.formats.in
Package containing Bio-Formats file format readers.
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ClassDescriptionAFIReader is the file format reader for Aperio AFI files.AIMReader is the file format reader for .aim files.AliconaReader is the file format reader for Alicona AL3D files.This is a file format reader for AmiraMesh data.This is the common interface for all formats, compressed or not.AnalyzeReader is the file format reader for Analyze 7.5 files.APLReader is the file format reader for Olympus APL files.APNGReader is the file format reader for Animated Portable Network Graphics (APNG) images.ARFReader is the file format reader for Axon Raw Format (ARF) files, produced by INDEC BioSystems's Imaging Workbench software.AVIReader is the file format reader for AVI files.BaseTiffReader is the superclass for file format readers compatible with or derived from the TIFF 6.0 file format.BaseZeissReader contains common functionality required by readers for Zeiss AxioVision formats.Line drawing styles.Feature types.Fill styles.Line ending styles.Point styles.BDReader is the file format reader for BD Pathway datasets.Reader for BDV files.BIFormatReader is the superclass for file format readers that use java.awt.image.BufferedImage as the native data type.BioRadGelReader is the file format reader for Bio-Rad gel files.BioRadReader is the file format reader for Bio-Rad PIC files.BioRadSCNReader is the reader for Bio-Rad .scn filesBMPReader is the file format reader for Microsoft Bitmap (BMP) files.BrukerReader is the file format reader for Bruker MRI files.BurleighReader is the file format reader for Burleigh .img files.CanonRawReader is the file format reader for Canon RAW files.Reader for CellH5 (HDF) files.Reader for Cellomics C01 files.CellSensReader is the file format reader for cellSens .vsi files.A bioformat reader for the Yokagawa Cellvoyager CV1000 automated microscope ( http://www.yokogawa.com/scanner/products/cv1000e.htm).CellWorxReader is the file format reader for CellWorx .pnl files.ColumbusReader is the file format reader for screens exported from PerkinElmer Columbus.DCIMGReader reads Hamamatsu DCIMG files.Default implementation of
MetadataOptions.DeltavisionReader is the file format reader for Deltavision files.This private class structure holds the details for the extended header.DicomReader is the file format reader for DICOM files.DNGReader is the file format reader for Canon DNG (TIFF) files.Configuration object for readers and writers.Ecat7Reader is the file format reader for ECAT 7 files.Reader is the file format reader for Encapsulated PostScript (EPS) files.FakeReader is the file format reader for faking input data.FEIReader is the file format reader for FEI and Philips .img files.FEITiffReader is the file format reader for TIFF files produced by various FEI software.FitsReader is the file format reader for Flexible Image Transport System (FITS) images.FlexReader is a file format reader for Evotec Flex files.FluoviewReader is the file format reader for Olympus Fluoview TIFF files AND Andor Bio-imaging Division (ABD) TIFF files.FujiReader is the file format reader for Fuji LAS 3000 datasets.FV1000Reader is the file format reader for Fluoview FV 1000 OIB and Fluoview FV 1000 OIF files.GatanDM2Reader is the file format reader for Gatan .dm2 files.GatanReader is the file format reader for Gatan files.GelReader is the file format reader for Molecular Dynamics GEL TIFF files.GIFReader is the file format reader for Graphics Interchange Format (GIF) files.HamamatsuVMSReader is the file format reader for Hamamatsu VMS datasets.HISReader is the file format reader for Hamamatsu .his files.HitachiReader is the file format reader for S-4800 files.HRDGDFReader is the file format reader for the Gridded Data Format used by NOAA's Hurricane Research Division.I2IReader is the file format reader for I2I files.ICSReader is the file format reader for ICS (Image Cytometry Standard) files.A record containing boolean valuesImaconReader is the file format reader for Imacon .fff (TIFF) files.ImageIOReader is the superclass for file format readers that use the javax.imageio package.ImagicReader is the file format reader for IMAGIC files.Reader for Bitplane Imaris 5.5 (HDF) files.ImarisReader is the file format reader for Bitplane Imaris files.ImarisTiffReader is the file format reader for Bitplane Imaris 3 files (TIFF variant).Reader for IMOD binary files.ImprovisionTiffReader is the file format reader for Improvision TIFF files.ImspectorReader is the file format reader for Imspector .msr files.InCell3000Reader is the file format reader for InCell 3000.InCellReader is the file format reader for InCell 1000/2000 datasets.INRReader is the file format reader for INR files.InveonReader is the file format reader for Inveon files.IonpathMIBITiffReader is the file format reader for Ionpath MIBI TIFF files.IPLabReader is the file format reader for IPLab (.IPL) files.IPWReader is the file format reader for Image-Pro Workspace (IPW) files.IvisionReader is the file format reader for IVision (.IPM) files.JDCEReader is the file format reader for Molecular Devices JDCE plates.JEOLReader is the file format reader for JEOL files.A parser for JPEG 2000 metadata.JPEG2000Reader is the file format reader for JPEG-2000 images.JPEGReader is the file format reader for JPEG images.JPKReader is the file format reader for JPK Instruments files.JPXReader is the file format reader for JPX (3D JPEG-2000) images.Reader for Khoros XV files.Reader for Keller Lab Block (KLB) files.KodakReader is the file format reader for Kodak Molecular Imaging .bip files.L2DReader is the file format reader for Li-Cor L2D datasets.SAX handler for parsing XML in Leica LIF and Leica TCS files.LeicaReader is the file format reader for Leica files.LeicaSCNReader is the file format reader for Leica SCN TIFF files.LEOReader is the file format reader for LEO EM files.LiFlimReader is the file format reader for LI-FLIM files.LIFReader is the file format reader for Leica LIF files.LIMReader is the file format reader for Laboratory Imaging/Nikon LIM files.LOFReader is the file format reader for Leica Microsystems' LOF files.Holds metadata-related options.MetamorphTiffReader is the file format reader for TIFF files produced by Metamorph software version 7.5 and above.Reader is the file format reader for Metamorph STK files.MetamorphTiffReader is the file format reader for TIFF files produced by Metamorph software version 7.5 and above.MetaxpressTiffReader is the file format reader for MetaXpress .htd + TIFF files.MIASReader is the file format reader for Maia Scientific MIAS-2 datasets.MicroCTReader is the file format reader for VFF files from a GE MicroCT scanner.MicromanagerReader is the file format reader for Micro-Manager files.MikroscanTiffReader is the file format reader for Mikroscan TIFF files.MINCReader is the file format reader for MINC MRI files.MinimalTiffReader is the superclass for file format readers compatible with or derived from the TIFF 6.0 file format.MNGReader is the file format reader for Multiple-image Network Graphics (MNG) files.MolecularImagingReader is the file format reader for Molecular Imaging files.MRCReader is the file format reader for MRC files.MRWReader is the file format reader for Minolta MRW files.NAFReader is the file format reader for Hamamatsu Aquacosmos NAF files.DefaultHandler implementation for handling XML produced by Nikon Elements.ND2Reader is the file format reader for Nikon ND2 files.NDPIReader is the file format reader for Hamamatsu .ndpi files.NDPISReader is the file format reader for Hamamatsu .ndpis files.NiftiReader is the file format reader for NIfTI files.NikonElementsTiffReader is the file format reader for TIFF files produced by Nikon Elements.NikonReader is the file format reader for Nikon NEF (TIFF) files.NikonTiffReader is the file format reader for Nikon TIFF files.File format reader for NRRD files; see http://teem.sourceforge.net/nrrd.OBFReader is the file format reader for Imspector OBF files.OIRReader is the file format reader for Olympus .oir files.This is a class that wraps three numbers c,z,t and an object can be used as a key in a hashmap.OlympusTileReader is the file format reader for Olympus .omp2info files.OMETiffReader is the file format reader for OME-TIFF files.OMEXMLReader is the file format reader for OME-XML files.OpenlabRawReader is the file format reader for Openlab RAW files.OpenlabReader is the file format reader for Openlab LIFF files.OperettaReader is the file format reader for PerkinElmer Operetta data.OxfordInstrumentsReader is the file format reader for Oxford Instruments .top files.PCIReader is the file format reader for SimplePCI (Compix) .cxd files.PCORAWReader is the file format reader for PCORAW files.PCXReader is the file format reader for PCX files (originally used by PC Paintbrush; now used in Zeiss' LSM Image Browser).PDSReader is the file format reader for Perkin Elmer densitometer files.PerkinElmerReader is the file format reader for PerkinElmer files.PGMReader is the file format reader for Portable Gray Map (PGM) images.PhotoshopTiffReader is the file format reader for Adobe Photoshop TIFF files.PictReader is the file format reader for Apple PICT files.PovrayReader is the file format reader for POV-Ray .df3 files.PQBinReader is the file format reader for PicoQuant .bin files.Metadata structure for Prairie Technologies' TIFF-based format.A value in a Prairie metadata dictionary.A leaf value with an actualPrairieMetadata.ValueItem.value()as well as an optionalPrairieMetadata.ValueItem.description().A table of values.PrairieReader is the file format reader for Prairie Technologies' TIFF variant.PSDReader is the file format reader for Photoshop PSD files.PyramidTiffReader is the file format reader for pyramid TIFFs.QTReader is the file format reader for QuickTime movie files.QuesantReader is the file format reader for Quesant .afm files.RHKReader is the file format reader for RHK Technologies files.SBIGReader is the file format reader for SBIG files.ScanrReader is the file format reader for Olympus ScanR datasets.SDTInfo encapsulates the header information for Becker & Hickl SPC-Image SDT files.SDTReader is the file format reader for Becker & Hickl SPC-Image SDT files.SeikoReader is the file format reader for Seiko .xqd/.xqf files.SEQReader is the file format reader for Image-Pro Sequence files.SIFReader is the file format reader for Andor SIF files.SimplePCITiffReader is the file format reader for TIFF files produced by SimplePCI software.SISReader is the file format reader for Olympus Soft Imaging Solutions TIFF files.SlidebookReader is the file format reader for 3I Slidebook files.SMCameraReader is the file format reader for SM camera files.SPCReader is the file format reader for Becker & Hickl SPC-Image SPC FIFO files.SPEReader is the file format reader for Princeton Instruments SPE .spe files.SpeHeaderEntry is an Enum which provides a list of all available SPE header entries along with the offset value from the top of the header in bytes and their associated data typeSpeHeaderType is an Enum representing the available data types stored in the SPE headerSpiderReader is the file format reader for SPIDER files.SVSReader is the file format reader for Aperio SVS TIFF files.File format reader for Truevision Targa files.TCSReader is the file format reader for Leica TCS TIFF files and their companion XML file.Reader for text files containing tables of data.TiffDelegateReader is a file format reader for TIFF files.TiffJAIReader is a file format reader for TIFF images.TiffReader is the file format reader for regular TIFF files, not of any specific TIFF variant.Reader for decoding JPEG images using java.awt.Toolkit and TurboJPEG.TillVisionReader is the file format reader for TillVision files.Reader for TissueFAXS format from TissueGnostics.TopometrixReader is the file format reader for TopoMetrix .tfr, .ffr, .zfr, .zfp, and .2fl files.TrestleReader is the file format reader for Trestle slide datasets.UBMReader is the file format reader for UBM .pr3 files.UnisokuReader is the file format reader for Unisoku STM files.VarianFDFReader is the file format reader for Varian FDF files.VectraReader is the reader for PerkinElmer Vectra QPTIFF dataVeecoReader is the file format reader for Veeco HDF files.VentanaReader is the file format reader for Ventana .bif files.VGSAMReader is the file format reader for VG SAM .dti files.VisitechReader is the file format reader for Visitech XYS files.VolocityClippingReader is the file format reader for Volocity library clipping files.VolocityReader is the file format reader for Volocity library files.WATOPReader is the file format reader for WA Technology .wat files.XLEFReader is the file format reader for Leica Microsystems' XLEF files.Helper class to sort file paths by name and depthZeissCZIReader is the file format reader for Zeiss .czi files.Zeiss LMS reader for data from Zeiss CSM 700 systems.ZeissLSMReader is the file format reader for Zeiss LSM files.SAX handler for parsing XML in Zeiss TIFF files.ZeissTIFFReader is the file format reader for Zeiss AxioVision TIFF files and their companion XML file.ZeissXRMReader is the file format reader for Zeiss X-Ray Microscopy .txm and .txrm files.ZeissZVIReader is the file format reader for Zeiss ZVI files.Reader for Zip files.