Package loci.formats.in

Class TissueFAXSReader.ScanRegion

java.lang.Object

loci.formats.in.TissueFAXSReader.ScanRegion

Enclosing class:

TissueFAXSReader

class TissueFAXSReader.ScanRegion
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
List<TissueFAXSReader.Channel>	channels
Integer	correctionImageCoreIndex
HashMap<String,Integer>	correctionImageIDs
String	file
HashMap<String,loci.common.Region>	fovs
int	fullResolutionCoreIndex
int	id
int	overlapX
int	overlapY
org.json.JSONObject	regionMetadata
List<Integer>	resolutions
int	scaleFactor
int[]	tileRangeX
int[]	tileRangeY
int	tileSizeX
int	tileSizeY
int	timepoint
Integer	tmaX
Integer	tmaY
Integer[]	zSteps

Constructor Summary

Constructors

Constructor	Description
ScanRegion()

Method Summary

Modifier and Type	Method	Description
void	parseJSON()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

file

public String file

regionMetadata

public org.json.JSONObject regionMetadata

id

public int id

fullResolutionCoreIndex

public int fullResolutionCoreIndex

correctionImageCoreIndex

public Integer correctionImageCoreIndex

resolutions

public List<Integer> resolutions

tileSizeX

public int tileSizeX

tileSizeY

public int tileSizeY

overlapX

public int overlapX

overlapY

public int overlapY

scaleFactor

public int scaleFactor

tileRangeX

public int[] tileRangeX

tileRangeY

public int[] tileRangeY

zSteps

public Integer[] zSteps

timepoint

public int timepoint

channels

public List<TissueFAXSReader.Channel> channels

fovs

public HashMap<String,loci.common.Region> fovs

correctionImageIDs

public HashMap<String,Integer> correctionImageIDs

tmaX

public Integer tmaX

tmaY

public Integer tmaY

Constructor Details

ScanRegion

ScanRegion()

Method Details

parseJSON

public void parseJSON()