public class VirtualImagePlus
extends ij.ImagePlus
ImagePlus
that supports
Bio-Formats-driven virtual stacks.Modifier and Type | Field and Description |
---|---|
private ij.process.LUT[] |
luts |
private IFormatReader |
r |
changes, CLOSED, COLOR_256, COLOR_RGB, compositeImage, currentSlice, dimensionsSet, flattenTitle, GRAY16, GRAY32, GRAY8, height, img, ip, locked, nChannels, nFrames, nSlices, OPENED, roi, setIJMenuBar, typeSet, UPDATED, width, win
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH
ADD_TO_OVERLAY, ALL_STATS, AREA, AREA_FRACTION, CENTER_OF_MASS, CENTROID, CIRCULARITY, ELLIPSE, FERET, INTEGRATED_DENSITY, INVERT_Y, KURTOSIS, LABELS, LIMIT, MAX_STANDARDS, MEAN, MEDIAN, MIN_MAX, MODE, NaN_EMPTY_CELLS, PERIMETER, RECT, SCIENTIFIC_NOTATION, SHAPE_DESCRIPTORS, SKEWNESS, SLICE, STACK_POSITION, STD_DEV
Constructor and Description |
---|
VirtualImagePlus(java.lang.String title,
ij.ImageStack stack) |
Modifier and Type | Method and Description |
---|---|
void |
close() |
ij.process.ImageStatistics |
getStatistics(int mOptions,
int nBins,
double histMin,
double histMax) |
void |
setLUTs(ij.process.LUT[] luts) |
void |
setReader(IFormatReader r) |
void |
setSlice(int index) |
addImageListener, clone, convertIndexToPosition, copy, copy, copyAttributes, copyScale, createEmptyStack, createHyperStack, createImagePlus, createLut, createNewRoi, crop, deleteRoi, draw, draw, duplicate, flatten, flattenStack, flush, getAllStatistics, getBitDepth, getBufferedImage, getBytesPerPixel, getC, getCalibration, getCanvas, getChannel, getChannelProcessor, getClipboard, getCompositeMode, getCurrentSlice, getDefault16bitRange, getDimensions, getDimensions, getDisplayMode, getDisplayRangeMax, getDisplayRangeMin, getFileInfo, getFrame, getGlobalCalibration, getHeight, getHideOverlay, getID, getImage, getImageStack, getImageStackSize, getInfoProperty, getLocalCalibration, getLocationAsString, getLuts, getMask, getNChannels, getNDimensions, getNFrames, getNSlices, getNumericProperty, getOpenAsHyperStack, getOriginalFileInfo, getOverlay, getPixel, getProcessor, getProp, getProperties, getProperty, getRawStatistics, getRoi, getShortTitle, getSlice, getStack, getStackIndex, getStackSize, getStartTime, getStaticGlobalCalibration, getStatistics, getStatistics, getStatistics, getStringProperty, getT, getTitle, getType, getWidth, getWindow, getZ, hide, imageUpdate, isComposite, isDisplayedHyperStack, isHyperStack, isInvertedLut, isLocked, isProcessor, isThreshold, isVisible, killRoi, killStack, lock, lockSilently, mouseMoved, notifyListeners, paste, removeImageListener, repaintWindow, resetClipboard, resetDisplayRange, resetStack, restoreRoi, revert, saveRoi, setActivated, setActiveChannels, setAntialiasRendering, setC, setCalibration, setColor, setDefault16bitRange, setDimensions, setDisplayMode, setDisplayRange, setDisplayRange, setFileInfo, setGlobalCalibration, setHideOverlay, setIgnoreFlush, setIgnoreGlobalCalibration, setIJMenuBar, setIJMenuBar, setImage, setImage, setLut, setOpenAsHyperStack, setOverlay, setOverlay, setOverlay, setPosition, setPosition, setPositionWithoutUpdate, setProcessor, setProcessor, setProperty, setRoi, setRoi, setRoi, setRoi, setSliceWithoutUpdate, setStack, setStack, setStack, setT, setTitle, setType, setWindow, setZ, show, show, startTiming, toString, trimProcessor, unlock, updateAndDraw, updateAndRepaintWindow, updateChannelAndDraw, updateImage, updatePosition, updateStatusbarValue
private IFormatReader r
private ij.process.LUT[] luts
public VirtualImagePlus(java.lang.String title, ij.ImageStack stack)
public void setReader(IFormatReader r)
public void setLUTs(ij.process.LUT[] luts)
public void setSlice(int index)
setSlice
in class ij.ImagePlus
public void close()
close
in class ij.ImagePlus
public ij.process.ImageStatistics getStatistics(int mOptions, int nBins, double histMin, double histMax)
getStatistics
in class ij.ImagePlus
Copyright © 2020 Open Microscopy Environment