loci.formats.tools

Class MakeTestOmeTiff

java.lang.Object

loci.formats.tools.MakeTestOmeTiff

public class MakeTestOmeTiff
extends java.lang.Object

Creates sample OME-TIFF datasets according to the given parameters.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
private static class	MakeTestOmeTiff.TextLine

Field Summary

Fields

Modifier and Type	Field and Description
boolean	isModulo
int	sizeCsub
int	sizeTsub
int	sizeZsub

Constructor Summary

Constructors

Constructor and Description
MakeTestOmeTiff()

Method Summary

Modifier and Type	Method and Description
private IMetadata	createMetadata(java.lang.String name, CoreMetadata info)
private java.awt.image.BufferedImage	createPlane(java.lang.String name, CoreMetadata info, int no)
private OMETiffWriter	createWriter(java.lang.String name, CoreMetadata info, java.lang.String id)
private void	displayUsage()
private void	ensureNonExisting(java.lang.String id)
private java.lang.String	getId(java.lang.String name)
private int	gradient(int type, int num, int total)
static void	main(java.lang.String[] args)
int	makeOmeTiff(java.lang.String... args)
void	makeOmeTiff(java.lang.String name, CoreMetadata info)
void	makeOmeTiffExtensions(java.lang.String... args)
void	makeSamples()
private void	writeData(java.lang.String name, CoreMetadata info, java.lang.String id, OMETiffWriter out)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

sizeZsub

public int sizeZsub

sizeTsub

public int sizeTsub

sizeCsub

public int sizeCsub

isModulo

public boolean isModulo

Constructor Detail

MakeTestOmeTiff

public MakeTestOmeTiff()

Method Detail

makeSamples

public void makeSamples()
                 throws FormatException,
                        java.io.IOException

Throws:

FormatException

java.io.IOException

makeOmeTiff

public int makeOmeTiff(java.lang.String... args)
                throws FormatException,
                       java.io.IOException

Throws:

FormatException

java.io.IOException

makeOmeTiffExtensions

public void makeOmeTiffExtensions(java.lang.String... args)
                           throws FormatException,
                                  java.io.IOException

Throws:

FormatException

java.io.IOException

makeOmeTiff

public void makeOmeTiff(java.lang.String name,
                        CoreMetadata info)
                 throws FormatException,
                        java.io.IOException

Throws:

FormatException

java.io.IOException

main

public static void main(java.lang.String[] args)
                 throws FormatException,
                        java.io.IOException

Throws:

FormatException

java.io.IOException

displayUsage

private void displayUsage()

getId

private java.lang.String getId(java.lang.String name)

createWriter

private OMETiffWriter createWriter(java.lang.String name,
                                   CoreMetadata info,
                                   java.lang.String id)
                            throws FormatException,
                                   java.io.IOException

Throws:

FormatException

java.io.IOException

writeData

private void writeData(java.lang.String name,
                       CoreMetadata info,
                       java.lang.String id,
                       OMETiffWriter out)
                throws FormatException,
                       java.io.IOException

Throws:

FormatException

java.io.IOException

ensureNonExisting

private void ensureNonExisting(java.lang.String id)

createMetadata

private IMetadata createMetadata(java.lang.String name,
                                 CoreMetadata info)
                          throws loci.common.services.DependencyException,
                                 loci.common.services.ServiceException,
                                 ome.xml.model.enums.EnumerationException

Throws:

loci.common.services.DependencyException

loci.common.services.ServiceException

ome.xml.model.enums.EnumerationException

createPlane

private java.awt.image.BufferedImage createPlane(java.lang.String name,
                                                 CoreMetadata info,
                                                 int no)

gradient

private int gradient(int type,
                     int num,
                     int total)