Uses of Class
ome.xml.model.OME

Packages that use OME

Package	Description
ome.specification
ome.xml.meta
ome.xml.model

Uses of OME in ome.specification

Fields in ome.specification declared as OME

Modifier and Type	Field and Description
protected OME	XMLMockObjects.ome Root of the file.

Methods in ome.specification that return OME

Modifier and Type	Method and Description
OME	XMLMockObjects.createAnnotatedImage() Creates and annotates an image.
OME	XMLMockObjects.createBasicPlateWithReagent() Creates a plate with 1 row, 1 column and 1 field.
OME	XMLMockObjects.createFullPopulatedPlate(int n) Creates a plate with XMLMockObjects.ROWS rows, XMLMockObjects.COLUMNS columns and XMLMockObjects.FIELDS field.
OME	XMLMockObjects.createImage() Creates and returns the root element.
OME	XMLMockObjects.createImage(boolean metadata) Creates and returns the root element.
OME	XMLMockObjects.createImageWithAcquisitionData() Creates an image with acquisition data.
OME	XMLMockObjects.createImageWithAnnotatedAcquisitionData() Creates an image with acquisition data.
OME	XMLMockObjects.createImageWithROI() Creates an image with ROI.
OME	XMLMockObjects.createPopulatedPlate(int n) Creates a plate with 1 row, 1 column and 1field.
OME	XMLMockObjects.createPopulatedPlate(int n, int fields) Creates a plate with 1 row, 1 column and fieldsfield.
OME	XMLMockObjects.createPopulatedPlate(int plates, int rows, int cols, int fields, int acqs) Creates several plates but no containing screen.
OME	XMLMockObjects.createPopulatedPlate(int plates, int rows, int cols, int fields, int acqs, boolean withMicrobeam) Creates several plates but no containing screen.
OME	XMLMockObjects.createPopulatedScreen() Creates one 2x2 plate of with a single well sample per well and one plate acquisition.
OME	XMLMockObjects.createPopulatedScreen(int plates, int rows, int cols, int fields, int acqs) Creates a screen with several plates.
OME	XMLMockObjects.createPopulatedScreen(int screens, int plates, int rows, int cols, int fields, int acqs) Creates several screens each with several plates.
OME	XMLMockObjects.createPopulatedScreen(int screens, int plates, int rows, int cols, int fields, int acqs, boolean withMicrobeam) Creates several screens each with several plates.
OME	XMLMockObjects.getRoot() Returns the root of the XML file.

Methods in ome.specification with parameters of type OME

Modifier and Type	Method and Description
private String	XMLWriter.createXMLDocument(OME ome, boolean binaryData) Creates the String version of the XML file creating using the specified root node.
void	XMLWriter.writeFile(File file, OME ome) Writes the data to the file.
void	XMLWriter.writeFile(File file, OME ome, boolean binaryData) Writes the data to the file.

Uses of OME in ome.xml.meta

Subclasses of OME in ome.xml.meta

Modifier and Type	Class and Description
class	OMEXMLMetadataRoot A utility class for constructing and manipulating OME-XML DOMs.

Constructors in ome.xml.meta with parameters of type OME

Constructor and Description
OMEXMLMetadataRoot(OME ome) Construct from existing OME instance.

Uses of OME in ome.xml.model

Constructors in ome.xml.model with parameters of type OME

Constructor and Description
OME(OME orig) Copy constructor.