Serialized Form (Bio-Formats API)

Package com.sun.media.imageioimpl.common
- Class com.sun.media.imageioimpl.common.BogusColorSpace extends ColorSpace implements Serializable
- Class com.sun.media.imageioimpl.common.InvertedCMYKColorSpace extends ColorSpace implements Serializable
  - Serialized Fields
    - csRGB
```
ColorSpace csRGB
```
- Class com.sun.media.imageioimpl.common.SimpleCMYKColorSpace extends ColorSpace implements Serializable
  - Serialized Fields
    - csRGB
```
ColorSpace csRGB
```
Package jj2000.j2k
- Class jj2000.j2k.NoNextElementException extends RuntimeException implements Serializable
- Class jj2000.j2k.NotImplementedError extends Error implements Serializable
Package jj2000.j2k.codestream
- Class jj2000.j2k.codestream.CorruptedCodestreamException extends IOException implements Serializable
Package jj2000.j2k.util
- Class jj2000.j2k.util.StringFormatException extends IllegalArgumentException implements Serializable
Package loci.common
- Class loci.common.HandleException extends IOException implements Serializable
- Class loci.common.IniList extends ArrayList<IniTable> implements Serializable
- Class loci.common.IniTable extends HashMap<String,String> implements Serializable
- Class loci.common.ReflectException extends Exception implements Serializable
Package loci.common.enumeration
- Class loci.common.enumeration.EnumException extends RuntimeException implements Serializable
  
  serialVersionUID:
  
  -4969429871517178079L
Package loci.common.services
- Class loci.common.services.DependencyException extends Exception implements Serializable
  
  serialVersionUID:
  
  -7836244849086491562L
  - Serialized Fields
    - failureClass
```
Class<T> failureClass
```
      The class that was used in a failed instantiation.
- Class loci.common.services.ServiceException extends Exception implements Serializable
  
  serialVersionUID:
  
  7402442944895106504L
Package loci.formats
- Class loci.formats.FormatException extends Exception implements Serializable
- Class loci.formats.MissingLibraryException extends FormatException implements Serializable
- Class loci.formats.UnknownFormatException extends FormatException implements Serializable
- Class loci.formats.UnsupportedCompressionException extends FormatException implements Serializable
Package loci.formats.cache
- Class loci.formats.cache.CacheException extends FormatException implements Serializable
Package loci.formats.gui
- Class loci.formats.gui.CacheComponent extends JPanel implements Serializable
  - Serialized Fields
    - cache
```
Cache cache
```
      The cache that this component controls.
    - sourceChooser
```
JComboBox<E> sourceChooser
```
      Combo box for choosing cache source.
    - strategyChooser
```
JComboBox<E> strategyChooser
```
      Combo box for choosing cache strategy.
    - range
```
JSpinner[] range
```
      Spinners for choosing range of slices to cache.
    - priority
```
JComboBox<E>[] priority
```
      Combo boxes for choosing axis priority.
    - order
```
JComboBox<E>[] order
```
      Combo boxes for choosing planar ordering.
    - id
```
String id
```
      File name that the cache is working with (debugging only).
    - lengths
```
int[] lengths
```
      Length of each dimensional axis, obtained from cache strategy.
- Class loci.formats.gui.CacheIndicator extends JComponent implements Serializable
  - Serialized Fields
    - cache
```
Cache cache
```
    - axis
```
int axis
```
    - comp
```
Component comp
```
    - lPad
```
int lPad
```
    - rPad
```
int rPad
```
- Class loci.formats.gui.DataConverter extends JFrame implements Serializable
  - Serialized Fields
    - reader
```
FileStitcher reader
```
    - swap
```
DimensionSwapper swap
```
    - biReader
```
BufferedImageReader biReader
```
    - writer
```
ImageWriter writer
```
    - biWriter
```
BufferedImageWriter biWriter
```
    - rc
```
JFileChooser rc
```
    - wc
```
JFileChooser wc
```
    - shutdown
```
boolean shutdown
```
    - force
```
boolean force
```
    - input
```
JTextField input
```
    - output
```
JTextField output
```
    - qtJava
```
JCheckBox qtJava
```
    - forceType
```
JCheckBox forceType
```
    - includeZ
```
JCheckBox includeZ
```
    - includeT
```
JCheckBox includeT
```
    - includeC
```
JCheckBox includeC
```
    - zLabel
```
JLabel zLabel
```
    - tLabel
```
JLabel tLabel
```
    - cLabel
```
JLabel cLabel
```
    - zChoice
```
JComboBox<E> zChoice
```
    - tChoice
```
JComboBox<E> tChoice
```
    - cChoice
```
JComboBox<E> cChoice
```
    - codec
```
JComboBox<E> codec
```
    - fps
```
JSpinner fps
```
    - series
```
JSpinner series
```
    - seriesRow
```
JPanel seriesRow
```
    - progress
```
JProgressBar progress
```
    - convert
```
JButton convert
```
- Class loci.formats.gui.ImageViewer extends JFrame implements Serializable
  - Serialized Fields
    - pane
```
JPanel pane
```
    - icon
```
ImageIcon icon
```
    - iconLabel
```
JLabel iconLabel
```
    - sliderPanel
```
JPanel sliderPanel
```
    - nSlider
```
JSlider nSlider
```
    - zSlider
```
JSlider zSlider
```
    - tSlider
```
JSlider tSlider
```
    - cSlider
```
JSlider cSlider
```
    - probeLabel
```
JLabel probeLabel
```
    - fileView
```
JMenuItem fileView
```
    - fileSave
```
JMenuItem fileSave
```
    - omeMeta
```
MetadataStore omeMeta
```
      Attached OME metadata store, if available.
    - myReader
```
BufferedImageReader myReader
```
      Current format reader.
    - myWriter
```
BufferedImageWriter myWriter
```
      Current format writer.
    - fileReader
```
IFormatReader fileReader
```
      Reader for files on disk.
    - fileWriter
```
IFormatWriter fileWriter
```
      Writer for files on disk.
    - filename
```
String filename
```
    - in
```
IFormatReader in
```
    - images
```
BufferedImage[] images
```
    - sizeZ
```
int sizeZ
```
    - sizeT
```
int sizeT
```
    - sizeC
```
int sizeC
```
    - anim
```
boolean anim
```
    - fps
```
int fps
```
    - canCloseReader
```
boolean canCloseReader
```
    - omexmlService
```
OMEXMLService omexmlService
```
      Service for working with OME-XML metadata.
    - sb
```
StringBuffer sb
```
- Class loci.formats.gui.PreviewPane extends JPanel implements Serializable
  - Serialized Fields
    - reader
```
BufferedImageReader reader
```
      Reader for use when loading thumbnails.
    - loadId
```
String loadId
```
      Current ID to load.
    - lastId
```
String lastId
```
      Last ID loaded.
    - loader
```
Thread loader
```
      Thumbnail loading thread.
    - loaderAlive
```
boolean loaderAlive
```
      Flag indicating whether loader thread should keep running.
    - refresher
```
Runnable refresher
```
      Method for syncing the view to the model.
    - iconLabel
```
JLabel iconLabel
```
      Labels containing thumbnail and dimensional information.
    - formatLabel
```
JLabel formatLabel
```
      Labels containing thumbnail and dimensional information.
    - resLabel
```
JLabel resLabel
```
      Labels containing thumbnail and dimensional information.
    - zctLabel
```
JLabel zctLabel
```
      Labels containing thumbnail and dimensional information.
    - typeLabel
```
JLabel typeLabel
```
      Labels containing thumbnail and dimensional information.
    - icon
```
ImageIcon icon
```
    - iconText
```
String iconText
```
    - formatText
```
String formatText
```
    - resText
```
String resText
```
    - zctText
```
String zctText
```
    - typeText
```
String typeText
```
    - iconTip
```
String iconTip
```
    - formatTip
```
String formatTip
```
    - resTip
```
String resTip
```
    - zctTip
```
String zctTip
```
    - typeTip
```
String typeTip
```
- Class loci.formats.gui.TwoChannelColorSpace extends ColorSpace implements Serializable
- Class loci.formats.gui.XMLCellRenderer extends DefaultTreeCellRenderer implements Serializable
- Class loci.formats.gui.XMLWindow extends JFrame implements Serializable
  - Serialized Fields
    - doc
```
Document doc
```
Package loci.formats.in
- Class loci.formats.in.PrairieMetadata.ValueTable extends HashMap<String,PrairieMetadata.Value> implements Serializable
Package loci.formats.tiff
- Class loci.formats.tiff.IFD extends HashMap<Integer,Object> implements Serializable
- Class loci.formats.tiff.IFDList extends ArrayList<IFD> implements Serializable
- Class loci.formats.tiff.TiffRational extends Number implements Serializable
  - Serialized Fields
    - numer
```
long numer
```
      Components of the rational's fractional representation.
    - denom
```
long denom
```
      Components of the rational's fractional representation.
Package loci.formats.tools
- Class loci.formats.tools.EditTiffG extends JFrame implements Serializable
  - Serialized Fields
    - textArea
```
JTextArea textArea
```
    - fileBox
```
JFileChooser fileBox
```
    - file
```
File file
```

Package loci.plugins.config

Class loci.plugins.config.ConfigWindow extends JFrame implements Serializable

Serialized Fields

formatsListModel
```
DefaultListModel<E> formatsListModel
```
formatsList
```
JList<E> formatsList
```
formatInfo
```
JPanel formatInfo
```
extensions
```
JTextField extensions
```
enabledBox
```
JCheckBox enabledBox
```
windowlessBox
```
JCheckBox windowlessBox
```
upgradeBox
```
JCheckBox upgradeBox
```
libsListModel
```
DefaultListModel<E> libsListModel
```
libsList
```
JList<E> libsList
```
type
```
JTextField type
```
status
```
JTextField status
```
version
```
JTextField version
```
path
```
JTextField path
```
url
```
JTextField url
```
license
```
JTextField license
```
notes
```
JTextArea notes
```
log
```
PrintWriter log
```

Class loci.plugins.config.InstallWizard extends JFrame implements Serializable

Package loci.plugins.in
- Class loci.plugins.in.ImporterMetadata extends HashMap<String,Object> implements Serializable
Package loci.plugins.shortcut
- Class loci.plugins.shortcut.ShortcutPanel extends JPanel implements Serializable
- Class loci.plugins.shortcut.ShortcutTransferHandler extends TransferHandler implements Serializable
  - Serialized Fields
    - shortcutPanel
```
ShortcutPanel shortcutPanel
```
      Associated shortcut panel.
Package loci.plugins.util
- Class loci.plugins.util.BrowserOptionsWindow extends JFrame implements Serializable
- Class loci.plugins.util.DataBrowser extends StackWindow implements Serializable
  - Serialized Fields
    - fpsSpin
```
JSpinner fpsSpin
```
    - animate
```
Button animate
```
    - options
```
Button options
```
    - metadata
```
Button metadata
```
    - anim
```
boolean anim
```
    - allowShow
```
boolean allowShow
```
    - metaWindow
```
XMLWindow metaWindow
```
    - optionsWindow
```
BrowserOptionsWindow optionsWindow
```
    - xml
```
String xml
```
    - zScroll
```
Scrollbar zScroll
```
    - cScroll
```
Scrollbar cScroll
```
    - tScroll
```
Scrollbar tScroll
```
    - cSliders
```
Scrollbar[] cSliders
```
    - cLengths
```
int[] cLengths
```
    - cIndex
```
int[] cIndex
```
- Class loci.plugins.util.SearchableWindow extends TextWindow implements Serializable
  - Serialized Fields
    - panel
```
TextPanel panel
```
    - index
```
int index
```
Package loci.poi.hpsf
- Class loci.poi.hpsf.CustomProperties extends HashMap implements Serializable
  - Serialized Fields
    - dictionaryIDToName
```
Map<K,V> dictionaryIDToName
```
      Maps property IDs to property names.
    - dictionaryNameToID
```
Map<K,V> dictionaryNameToID
```
      Maps property names to property IDs.
    - isPure
```
boolean isPure
```
      Tells whether this object is pure or not.
- Class loci.poi.hpsf.HPSFException extends Exception implements Serializable
  - Serialized Fields
    - reason
```
Throwable reason
```
      The underlying reason for this exception - may be null.
- Class loci.poi.hpsf.HPSFRuntimeException extends RuntimeException implements Serializable
  - Serialized Fields
    - reason
```
Throwable reason
```
      The underlying reason for this exception - may be null.
- Class loci.poi.hpsf.IllegalPropertySetDataException extends HPSFRuntimeException implements Serializable
- Class loci.poi.hpsf.IllegalVariantTypeException extends VariantTypeException implements Serializable
- Class loci.poi.hpsf.MarkUnsupportedException extends HPSFException implements Serializable
- Class loci.poi.hpsf.MissingSectionException extends HPSFRuntimeException implements Serializable
- Class loci.poi.hpsf.NoFormatIDException extends HPSFRuntimeException implements Serializable
- Class loci.poi.hpsf.NoPropertySetStreamException extends HPSFException implements Serializable
- Class loci.poi.hpsf.NoSingleSectionException extends HPSFRuntimeException implements Serializable
- Class loci.poi.hpsf.ReadingNotSupportedException extends UnsupportedVariantTypeException implements Serializable
- Class loci.poi.hpsf.UnexpectedPropertySetTypeException extends HPSFException implements Serializable
- Class loci.poi.hpsf.UnsupportedVariantTypeException extends VariantTypeException implements Serializable
- Class loci.poi.hpsf.VariantTypeException extends HPSFException implements Serializable
  - Serialized Fields
    - value
```
Object value
```
    - variantType
```
long variantType
```
- Class loci.poi.hpsf.WritingNotSupportedException extends UnsupportedVariantTypeException implements Serializable
Package loci.poi.hpsf.wellknown
- Class loci.poi.hpsf.wellknown.PropertyIDMap extends HashMap implements Serializable
- Class loci.poi.hpsf.wellknown.SectionIDMap extends HashMap implements Serializable
Package loci.poi.hssf.dev
- Class loci.poi.hssf.dev.EFHSSF extends Object implements Serializable
Package loci.poi.hssf.eventusermodel
- Class loci.poi.hssf.eventusermodel.HSSFUserException extends Exception implements Serializable
  - Serialized Fields
    - reason
```
Throwable reason
```
Package loci.poi.hssf.record
- Class loci.poi.hssf.record.RecordFormatException extends RuntimeException implements Serializable
Package loci.poi.poifs.filesystem
- Class loci.poi.poifs.filesystem.OfficeXmlFileException extends IllegalArgumentException implements Serializable
Package loci.poi.util
- Class loci.poi.util.LittleEndian.BufferUnderrunException extends IOException implements Serializable
Package loci.tests
- Class loci.tests.ImageTester extends JPanel implements Serializable
  - Serialized Fields
    - img
```
BufferedImage[][] img
```
Package ome.jxr
- Class ome.jxr.JXRException extends Exception implements Serializable
  
  serialVersionUID:
  
  -4189350966730975807L
Package ome.metakit
- Class ome.metakit.MetakitException extends Exception implements Serializable
Package ome.xml.model
- Class ome.xml.model.ReferenceList extends ArrayList<T> implements Serializable
  - Serialized Fields
    - backingSet
```
Set<E> backingSet
```
Package ome.xml.model.enums
- Class ome.xml.model.enums.EnumerationException extends Exception implements Serializable
Package org.libjpegturbo.turbojpeg
- Class org.libjpegturbo.turbojpeg.TJTransform extends Rectangle implements Serializable
  
  serialVersionUID:
  
  -127367705761430371L
  - Serialized Fields
    - op
```
int op
```
      Transform operation (one of OP_*)
    - options
```
int options
```
      Transform options (bitwise OR of one or more of OPT_*)
    - cf
```
TJCustomFilter cf
```
      Custom filter instance

Serialized Form

Package com.sun.media.imageioimpl.common

Class com.sun.media.imageioimpl.common.BogusColorSpace extends ColorSpace implements Serializable

Class com.sun.media.imageioimpl.common.InvertedCMYKColorSpace extends ColorSpace implements Serializable

Serialized Fields

csRGB

Class com.sun.media.imageioimpl.common.SimpleCMYKColorSpace extends ColorSpace implements Serializable

Serialized Fields

csRGB

Package jj2000.j2k

Class jj2000.j2k.NoNextElementException extends RuntimeException implements Serializable

Class jj2000.j2k.NotImplementedError extends Error implements Serializable

Package jj2000.j2k.codestream

Class jj2000.j2k.codestream.CorruptedCodestreamException extends IOException implements Serializable

Package jj2000.j2k.util

Class jj2000.j2k.util.StringFormatException extends IllegalArgumentException implements Serializable

Package loci.common

Class loci.common.HandleException extends IOException implements Serializable

Class loci.common.IniList extends ArrayList<IniTable> implements Serializable

Class loci.common.IniTable extends HashMap<String,String> implements Serializable

Class loci.common.ReflectException extends Exception implements Serializable

Package loci.common.enumeration

Class loci.common.enumeration.EnumException extends RuntimeException implements Serializable

Package loci.common.services

Class loci.common.services.DependencyException extends Exception implements Serializable

Serialized Fields

failureClass

Class loci.common.services.ServiceException extends Exception implements Serializable

Package loci.formats

Class loci.formats.FormatException extends Exception implements Serializable

Class loci.formats.MissingLibraryException extends FormatException implements Serializable

Class loci.formats.UnknownFormatException extends FormatException implements Serializable

Class loci.formats.UnsupportedCompressionException extends FormatException implements Serializable

Package loci.formats.cache

Class loci.formats.cache.CacheException extends FormatException implements Serializable

Package loci.formats.gui

Class loci.formats.gui.CacheComponent extends JPanel implements Serializable

Serialized Fields

cache

sourceChooser

strategyChooser

range

priority

order

id

lengths

Class loci.formats.gui.CacheIndicator extends JComponent implements Serializable

Serialized Fields

cache

axis

comp

lPad

rPad

Class loci.formats.gui.DataConverter extends JFrame implements Serializable

Serialized Fields

reader

swap

biReader

writer

biWriter

rc

wc

shutdown

force

input

output

qtJava

forceType

includeZ

includeT

includeC

zLabel

tLabel

cLabel

zChoice

tChoice

cChoice

codec

fps

series