public class Plate extends AbstractOMEModelObject
| Modifier and Type | Field and Description |
|---|---|
private List<Annotation> |
annotationLinks |
private NamingConvention |
columnNamingConvention |
private PositiveInteger |
columns |
private String |
description |
private String |
externalIdentifier |
private NonNegativeInteger |
fieldIndex |
private String |
id |
private static org.slf4j.Logger |
LOGGER
Logger for this class.
|
private String |
name |
static String |
NAMESPACE |
private List<PlateAcquisition> |
plateAcquisitions |
private NamingConvention |
rowNamingConvention |
private PositiveInteger |
rows |
private List<Screen> |
screenLinks |
private String |
status |
private Length |
wellOriginX |
private Length |
wellOriginY |
private List<Well> |
wells |
| Constructor and Description |
|---|
Plate()
Default constructor.
|
Plate(Element element,
OMEModel model)
Constructs Plate recursively from an XML DOM tree.
|
Plate(Plate orig)
Copy constructor.
|
getChildrenByTagName, stripNamespacePrefixpublic static final String NAMESPACE
private static final org.slf4j.Logger LOGGER
private String status
private PositiveInteger rows
private String externalIdentifier
private NamingConvention rowNamingConvention
private NamingConvention columnNamingConvention
private NonNegativeInteger fieldIndex
private PositiveInteger columns
private Length wellOriginY
private Length wellOriginX
private String id
private String name
private String description
private List<Annotation> annotationLinks
private List<PlateAcquisition> plateAcquisitions
public Plate()
public Plate(Element element, OMEModel model) throws EnumerationException
element - Root of the XML DOM tree to construct a model object
graph from.model - Handler for the OME model which keeps track of instances
and references seen during object population.EnumerationException - If there is an error instantiating an
enumeration during model object creation.public Plate(Plate orig)
public void update(Element element, OMEModel model) throws EnumerationException
update in interface OMEModelObjectupdate in class AbstractOMEModelObjectelement - Root of the XML DOM tree to construct a model object
graph from.model - Handler for the OME model which keeps track of instances
and references seen during object population.EnumerationException - If there is an error instantiating an
enumeration during model object creation.public boolean link(Reference reference, OMEModelObject o)
OMEModelObjectlink in interface OMEModelObjectlink in class AbstractOMEModelObjectreference - The type qualifier for the reference. This should
be the corresponding reference type for o. If, for example,
o is of type Image, reference
MUST be of type ImageRef.o - Model object to link to.true if this model object was able to handle the
reference, false otherwise.public String getStatus()
public void setStatus(String status)
public PositiveInteger getRows()
public void setRows(PositiveInteger rows)
public String getExternalIdentifier()
public void setExternalIdentifier(String externalIdentifier)
public NamingConvention getRowNamingConvention()
public void setRowNamingConvention(NamingConvention rowNamingConvention)
public static String getWellOriginXUnitXsdDefault()
public NamingConvention getColumnNamingConvention()
public void setColumnNamingConvention(NamingConvention columnNamingConvention)
public NonNegativeInteger getFieldIndex()
public void setFieldIndex(NonNegativeInteger fieldIndex)
public PositiveInteger getColumns()
public void setColumns(PositiveInteger columns)
public Length getWellOriginY()
public void setWellOriginY(Length wellOriginY)
public Length getWellOriginX()
public void setWellOriginX(Length wellOriginX)
public String getID()
public void setID(String id)
public static String getWellOriginYUnitXsdDefault()
public String getName()
public void setName(String name)
public String getDescription()
public void setDescription(String description)
public int sizeOfWellList()
public Well getWell(int index)
public void addWell(Well well)
public void removeWell(Well well)
public int sizeOfLinkedAnnotationList()
public List<Annotation> copyLinkedAnnotationList()
public Annotation getLinkedAnnotation(int index)
public Annotation setLinkedAnnotation(int index, Annotation o)
public boolean linkAnnotation(Annotation o)
public boolean unlinkAnnotation(Annotation o)
public int sizeOfPlateAcquisitionList()
public List<PlateAcquisition> copyPlateAcquisitionList()
public PlateAcquisition getPlateAcquisition(int index)
public PlateAcquisition setPlateAcquisition(int index, PlateAcquisition plateAcquisition)
public void addPlateAcquisition(PlateAcquisition plateAcquisition)
public void removePlateAcquisition(PlateAcquisition plateAcquisition)
public int sizeOfLinkedScreenList()
public Screen getLinkedScreen(int index)
public boolean linkScreen(Screen o)
public boolean unlinkScreen(Screen o)
public Element asXMLElement(Document document)
OMEModelObjectasXMLElement in interface OMEModelObjectasXMLElement in class AbstractOMEModelObjectdocument - Destination document for element creation, etc.protected Element asXMLElement(Document document, Element Plate_element)
AbstractOMEModelObjectasXMLElement in class AbstractOMEModelObjectdocument - Destination document for element creation, etc.Plate_element - Element from the subclass. If null a new
element will be created of this class.element populated with properties from this class.Copyright © 2015 Open Microscopy Environment