ZeissCZIReader.SubBlock (Bio-Formats API)

java.lang.Object
- loci.formats.in.ZeissCZIReader.Segment
- - loci.formats.in.ZeissCZIReader.SubBlock

Enclosing class:: ZeissCZIReader

 class ZeissCZIReader.SubBlock
extends ZeissCZIReader.Segment

Segment with ID "ZISRAWSUBBLOCK".

Field Summary

Fields
Modifier and Type	Field and Description
`int`	`attachmentSize`
`int`	`col`
`private long`	`dataOffset`
`long`	`dataSize`
`ZeissCZIReader.DirectoryEntry`	`directoryEntry`
`private Double`	`exposureTime`
`String`	`metadata`
`int`	`metadataSize`
`int`	`planeIndex`
`int`	`row`
`int`	`seriesIndex`
`private Length`	`stageX`
`private Length`	`stageY`
`private Length`	`stageZ`
`private Double`	`timestamp`
`int`	`x`
`int`	`y`

Fields inherited from class loci.formats.in.ZeissCZIReader.Segment
allocatedSize, filename, id, startingPosition, stream, usedSize

Constructor Summary

Constructors
Constructor and Description

ZeissCZIReader.SubBlock()

ZeissCZIReader.SubBlock(ZeissCZIReader.SubBlock model)

Constructors
Constructor and Description
`ZeissCZIReader.SubBlock()`
`ZeissCZIReader.SubBlock(ZeissCZIReader.SubBlock model)`

Method Summary

Methods
Modifier and Type Method and Description

void fillInData()

private void parseMetadata()

byte[] readPixelData()

byte[] readPixelData(RandomAccessInputStream s)
- Methods inherited from class loci.formats.in.ZeissCZIReader.Segment
  close, getStream
- Methods inherited from class java.lang.Object
  clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods
Modifier and Type	Method and Description
`void`	`fillInData()`
`private void`	`parseMetadata()`
`byte[]`	`readPixelData()`
`byte[]`	`readPixelData(RandomAccessInputStream s)`

Field Detail

metadataSize
```
public int metadataSize
```

attachmentSize
```
public int attachmentSize
```

dataSize
```
public long dataSize
```

directoryEntry

public ZeissCZIReader.DirectoryEntry directoryEntry

metadata
```
public String metadata
```

seriesIndex
```
public int seriesIndex
```

planeIndex
```
public int planeIndex
```

dataOffset
```
private long dataOffset
```

stageX
```
private Length stageX
```

stageY
```
private Length stageY
```

stageZ
```
private Length stageZ
```

timestamp
```
private Double timestamp
```

exposureTime
```
private Double exposureTime
```

x
```
public int x
```

y
```
public int y
```

row
```
public int row
```

col
```
public int col
```

Constructor Detail

ZeissCZIReader.SubBlock
```
public ZeissCZIReader.SubBlock()
```

ZeissCZIReader.SubBlock

public ZeissCZIReader.SubBlock(ZeissCZIReader.SubBlock model)

Method Detail

fillInData
```
public void fillInData()
                throws IOException
```
Overrides:

fillInData in class ZeissCZIReader.Segment

Throws:

IOException

readPixelData

public byte[] readPixelData()
                     throws FormatException,
                            IOException

Throws:: FormatException; IOException

readPixelData

public byte[] readPixelData(RandomAccessInputStream s)
                     throws FormatException,
                            IOException

Throws:: FormatException; IOException

parseMetadata

private void parseMetadata()
                    throws IOException

Throws:: IOException

Class ZeissCZIReader.SubBlock

Field Summary

Fields inherited from class loci.formats.in.ZeissCZIReader.Segment

Constructor Summary

Method Summary

Methods inherited from class loci.formats.in.ZeissCZIReader.Segment

Methods inherited from class java.lang.Object

Field Detail

metadataSize

attachmentSize

dataSize

directoryEntry

metadata

seriesIndex

planeIndex

dataOffset

stageX

stageY

stageZ

timestamp

exposureTime

x

y

row

col

Constructor Detail

ZeissCZIReader.SubBlock

ZeissCZIReader.SubBlock

Method Detail

fillInData

readPixelData

readPixelData

parseMetadata