loci.common

Class CBZip2InputStream.Data

java.lang.Object

loci.common.CBZip2InputStream.Data

Enclosing class:

CBZip2InputStream

private static final class CBZip2InputStream.Data
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
(package private) int[][]	base
(package private) int[]	cftab
(package private) char[]	getAndMoveToFrontDecodeYY
(package private) boolean[]	inUse
(package private) int[][]	limit
(package private) byte[]	ll8
(package private) int[]	minLens
(package private) int[][]	perm
(package private) byte[]	recvDecodingTablesPos
(package private) byte[]	selector
(package private) byte[]	selectorMtf
(package private) byte[]	seqToUnseq
(package private) char[][]	tempCharArray2d
(package private) int[]	tt
(package private) int[]	unzftab Freq table collected to save a pass over the data during decompression.

Constructor Summary

Constructors

Constructor and Description
CBZip2InputStream.Data(int blockSize100k)

Method Summary

Methods

Modifier and Type	Method and Description
(package private) int[]	initTT(int length) Initializes the tt array.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

inUse

final boolean[] inUse

seqToUnseq

final byte[] seqToUnseq

selector

final byte[] selector

selectorMtf

final byte[] selectorMtf

unzftab

final int[] unzftab

Freq table collected to save a pass over the data during decompression.

limit

final int[][] limit

base

final int[][] base

perm

final int[][] perm

minLens

final int[] minLens

cftab

final int[] cftab

getAndMoveToFrontDecodeYY

final char[] getAndMoveToFrontDecodeYY

tempCharArray2d

final char[][] tempCharArray2d

recvDecodingTablesPos

final byte[] recvDecodingTablesPos

tt

int[] tt

ll8

byte[] ll8

Constructor Detail

CBZip2InputStream.Data

CBZip2InputStream.Data(int blockSize100k)

Method Detail

initTT

int[] initTT(int length)

Initializes the tt array. This method is called when the required length of the array is known. I don't initialize it at construction time to avoid unneccessary memory allocation when compressing small files.