MetadataRetrieve (Bio-Formats API)

All Known Subinterfaces:

IMetadata, OMEXMLMetadata

All Known Implementing Classes:

AbstractOMEXMLMetadata, AggregateMetadata, DummyMetadata, OMEXMLMetadataImpl
```
public interface MetadataRetrieve
```
A proxy whose responsibility it is to extract biological image data from a particular storage medium.
The MetadataRetrieve interface encompasses the metadata that any specific storage medium (file, relational database, etc.) should be expected to access from its backing data model.
The MetadataRetrieve interface goes hand in hand with the MetadataStore interface. Essentially, MetadataRetrieve provides the "getter" methods for a storage medium, and MetadataStore provides the "setter" methods.
Since it often makes sense for a storage medium to implement both interfaces, there is also an IMetadata interface encompassing both MetadataStore and MetadataRetrieve, which reduces the need to cast between object types.
See OMEXMLMetadata for an example implementation.
Source code:

Trac, Gitweb

Author:

Melissa Linkert linkert at wisc.edu, Curtis Rueden ctrueden at wisc.edu

Method Summary

Methods
Modifier and Type	Method and Description
`String`	`getArcID(int instrumentIndex, int lightSourceIndex)`
`String`	`getArcLotNumber(int instrumentIndex, int lightSourceIndex)`
`String`	`getArcManufacturer(int instrumentIndex, int lightSourceIndex)`
`String`	`getArcModel(int instrumentIndex, int lightSourceIndex)`
`Double`	`getArcPower(int instrumentIndex, int lightSourceIndex)`
`String`	`getArcSerialNumber(int instrumentIndex, int lightSourceIndex)`
`ArcType`	`getArcType(int instrumentIndex, int lightSourceIndex)`
`String`	`getBinaryFileFileName(int fileAnnotationIndex)`
`String`	`getBinaryFileMIMEType(int fileAnnotationIndex)`
`NonNegativeLong`	`getBinaryFileSize(int fileAnnotationIndex)`
`String`	`getBinaryOnlyMetadataFile(int metadataFileIndex)`
`String`	`getBinaryOnlyUUID(int UUIDIndex)`
`int`	`getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)`
`String`	`getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex, int annotationRefIndex)`
`int`	`getBooleanAnnotationCount()`
`String`	`getBooleanAnnotationDescription(int booleanAnnotationIndex)`
`String`	`getBooleanAnnotationID(int booleanAnnotationIndex)`
`String`	`getBooleanAnnotationNamespace(int booleanAnnotationIndex)`
`Boolean`	`getBooleanAnnotationValue(int booleanAnnotationIndex)`
`AcquisitionMode`	`getChannelAcquisitionMode(int imageIndex, int channelIndex)`
`String`	`getChannelAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)`
`int`	`getChannelAnnotationRefCount(int imageIndex, int channelIndex)`
`Color`	`getChannelColor(int imageIndex, int channelIndex)`
`ContrastMethod`	`getChannelContrastMethod(int imageIndex, int channelIndex)`
`int`	`getChannelCount(int imageIndex)`
`PositiveInteger`	`getChannelEmissionWavelength(int imageIndex, int channelIndex)`
`PositiveInteger`	`getChannelExcitationWavelength(int imageIndex, int channelIndex)`
`String`	`getChannelFilterSetRef(int imageIndex, int channelIndex)`
`String`	`getChannelFluor(int imageIndex, int channelIndex)`
`String`	`getChannelID(int imageIndex, int channelIndex)`
`IlluminationType`	`getChannelIlluminationType(int imageIndex, int channelIndex)`
`PercentFraction`	`getChannelLightSourceSettingsAttenuation(int imageIndex, int channelIndex)`
`String`	`getChannelLightSourceSettingsID(int imageIndex, int channelIndex)`
`PositiveInteger`	`getChannelLightSourceSettingsWavelength(int imageIndex, int channelIndex)`
`String`	`getChannelName(int imageIndex, int channelIndex)`
`Double`	`getChannelNDFilter(int imageIndex, int channelIndex)`
`Double`	`getChannelPinholeSize(int imageIndex, int channelIndex)`
`Integer`	`getChannelPockelCellSetting(int imageIndex, int channelIndex)`
`PositiveInteger`	`getChannelSamplesPerPixel(int imageIndex, int channelIndex)`
`int`	`getCommentAnnotationAnnotationCount(int commentAnnotationIndex)`
`String`	`getCommentAnnotationAnnotationRef(int commentAnnotationIndex, int annotationRefIndex)`
`int`	`getCommentAnnotationCount()`
`String`	`getCommentAnnotationDescription(int commentAnnotationIndex)`
`String`	`getCommentAnnotationID(int commentAnnotationIndex)`
`String`	`getCommentAnnotationNamespace(int commentAnnotationIndex)`
`String`	`getCommentAnnotationValue(int commentAnnotationIndex)`
`String`	`getDatasetAnnotationRef(int datasetIndex, int annotationRefIndex)`
`int`	`getDatasetAnnotationRefCount(int datasetIndex)`
`int`	`getDatasetCount()`
`String`	`getDatasetDescription(int datasetIndex)`
`String`	`getDatasetExperimenterGroupRef(int datasetIndex)`
`String`	`getDatasetExperimenterRef(int datasetIndex)`
`String`	`getDatasetID(int datasetIndex)`
`String`	`getDatasetImageRef(int datasetIndex, int imageRefIndex)`
`int`	`getDatasetImageRefCount(int datasetIndex)`
`String`	`getDatasetName(int datasetIndex)`
`int`	`getDatasetRefCount(int projectIndex)`
`Double`	`getDetectorAmplificationGain(int instrumentIndex, int detectorIndex)`
`int`	`getDetectorCount(int instrumentIndex)`
`Double`	`getDetectorGain(int instrumentIndex, int detectorIndex)`
`String`	`getDetectorID(int instrumentIndex, int detectorIndex)`
`String`	`getDetectorLotNumber(int instrumentIndex, int detectorIndex)`
`String`	`getDetectorManufacturer(int instrumentIndex, int detectorIndex)`
`String`	`getDetectorModel(int instrumentIndex, int detectorIndex)`
`Double`	`getDetectorOffset(int instrumentIndex, int detectorIndex)`
`String`	`getDetectorSerialNumber(int instrumentIndex, int detectorIndex)`
`Binning`	`getDetectorSettingsBinning(int imageIndex, int channelIndex)`
`Double`	`getDetectorSettingsGain(int imageIndex, int channelIndex)`
`String`	`getDetectorSettingsID(int imageIndex, int channelIndex)`
`Double`	`getDetectorSettingsOffset(int imageIndex, int channelIndex)`
`Double`	`getDetectorSettingsReadOutRate(int imageIndex, int channelIndex)`
`Double`	`getDetectorSettingsVoltage(int imageIndex, int channelIndex)`
`DetectorType`	`getDetectorType(int instrumentIndex, int detectorIndex)`
`Double`	`getDetectorVoltage(int instrumentIndex, int detectorIndex)`
`Double`	`getDetectorZoom(int instrumentIndex, int detectorIndex)`
`int`	`getDichroicCount(int instrumentIndex)`
`String`	`getDichroicID(int instrumentIndex, int dichroicIndex)`
`String`	`getDichroicLotNumber(int instrumentIndex, int dichroicIndex)`
`String`	`getDichroicManufacturer(int instrumentIndex, int dichroicIndex)`
`String`	`getDichroicModel(int instrumentIndex, int dichroicIndex)`
`String`	`getDichroicSerialNumber(int instrumentIndex, int dichroicIndex)`
`int`	`getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)`
`String`	`getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex, int annotationRefIndex)`
`int`	`getDoubleAnnotationCount()`
`String`	`getDoubleAnnotationDescription(int doubleAnnotationIndex)`
`String`	`getDoubleAnnotationID(int doubleAnnotationIndex)`
`String`	`getDoubleAnnotationNamespace(int doubleAnnotationIndex)`
`Double`	`getDoubleAnnotationValue(int doubleAnnotationIndex)`
`Color`	`getEllipseFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getEllipseFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getEllipseFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getEllipseFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getEllipseFontStyle(int ROIIndex, int shapeIndex)`
`String`	`getEllipseID(int ROIIndex, int shapeIndex)`
`LineCap`	`getEllipseLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getEllipseLocked(int ROIIndex, int shapeIndex)`
`Double`	`getEllipseRadiusX(int ROIIndex, int shapeIndex)`
`Double`	`getEllipseRadiusY(int ROIIndex, int shapeIndex)`
`Color`	`getEllipseStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getEllipseStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getEllipseStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getEllipseText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getEllipseTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getEllipseTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getEllipseTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getEllipseTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getEllipseVisible(int ROIIndex, int shapeIndex)`
`Double`	`getEllipseX(int ROIIndex, int shapeIndex)`
`Double`	`getEllipseY(int ROIIndex, int shapeIndex)`
`int`	`getExperimentCount()`
`String`	`getExperimentDescription(int experimentIndex)`
`String`	`getExperimenterAnnotationRef(int experimenterIndex, int annotationRefIndex)`
`int`	`getExperimenterAnnotationRefCount(int experimenterIndex)`
`int`	`getExperimenterCount()`
`String`	`getExperimenterEmail(int experimenterIndex)`
`String`	`getExperimenterFirstName(int experimenterIndex)`
`String`	`getExperimenterGroupAnnotationRef(int experimenterGroupIndex, int annotationRefIndex)`
`int`	`getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)`
`int`	`getExperimenterGroupCount()`
`String`	`getExperimenterGroupDescription(int experimenterGroupIndex)`
`String`	`getExperimenterGroupExperimenterRef(int experimenterGroupIndex, int experimenterRefIndex)`
`int`	`getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)`
`String`	`getExperimenterGroupID(int experimenterGroupIndex)`
`String`	`getExperimenterGroupLeader(int experimenterGroupIndex, int leaderIndex)`
`String`	`getExperimenterGroupName(int experimenterGroupIndex)`
`String`	`getExperimenterID(int experimenterIndex)`
`String`	`getExperimenterInstitution(int experimenterIndex)`
`String`	`getExperimenterLastName(int experimenterIndex)`
`String`	`getExperimenterMiddleName(int experimenterIndex)`
`String`	`getExperimenterUserName(int experimenterIndex)`
`String`	`getExperimentExperimenterRef(int experimentIndex)`
`String`	`getExperimentID(int experimentIndex)`
`ExperimentType`	`getExperimentType(int experimentIndex)`
`String`	`getFilamentID(int instrumentIndex, int lightSourceIndex)`
`String`	`getFilamentLotNumber(int instrumentIndex, int lightSourceIndex)`
`String`	`getFilamentManufacturer(int instrumentIndex, int lightSourceIndex)`
`String`	`getFilamentModel(int instrumentIndex, int lightSourceIndex)`
`Double`	`getFilamentPower(int instrumentIndex, int lightSourceIndex)`
`String`	`getFilamentSerialNumber(int instrumentIndex, int lightSourceIndex)`
`FilamentType`	`getFilamentType(int instrumentIndex, int lightSourceIndex)`
`int`	`getFileAnnotationAnnotationCount(int fileAnnotationIndex)`
`String`	`getFileAnnotationAnnotationRef(int fileAnnotationIndex, int annotationRefIndex)`
`int`	`getFileAnnotationCount()`
`String`	`getFileAnnotationDescription(int fileAnnotationIndex)`
`String`	`getFileAnnotationID(int fileAnnotationIndex)`
`String`	`getFileAnnotationNamespace(int fileAnnotationIndex)`
`int`	`getFilterCount(int instrumentIndex)`
`String`	`getFilterFilterWheel(int instrumentIndex, int filterIndex)`
`String`	`getFilterID(int instrumentIndex, int filterIndex)`
`String`	`getFilterLotNumber(int instrumentIndex, int filterIndex)`
`String`	`getFilterManufacturer(int instrumentIndex, int filterIndex)`
`String`	`getFilterModel(int instrumentIndex, int filterIndex)`
`String`	`getFilterSerialNumber(int instrumentIndex, int filterIndex)`
`int`	`getFilterSetCount(int instrumentIndex)`
`String`	`getFilterSetDichroicRef(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)`
`int`	`getFilterSetEmissionFilterRefCount(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)`
`int`	`getFilterSetExcitationFilterRefCount(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetID(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetLotNumber(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetManufacturer(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetModel(int instrumentIndex, int filterSetIndex)`
`String`	`getFilterSetSerialNumber(int instrumentIndex, int filterSetIndex)`
`FilterType`	`getFilterType(int instrumentIndex, int filterIndex)`
`Timestamp`	`getImageAcquisitionDate(int imageIndex)`
`String`	`getImageAnnotationRef(int imageIndex, int annotationRefIndex)`
`int`	`getImageAnnotationRefCount(int imageIndex)`
`int`	`getImageCount()`
`String`	`getImageDescription(int imageIndex)`
`String`	`getImageExperimenterGroupRef(int imageIndex)`
`String`	`getImageExperimenterRef(int imageIndex)`
`String`	`getImageExperimentRef(int imageIndex)`
`String`	`getImageID(int imageIndex)`
`String`	`getImageInstrumentRef(int imageIndex)`
`String`	`getImageMicrobeamManipulationRef(int imageIndex, int microbeamManipulationRefIndex)`
`String`	`getImageName(int imageIndex)`
`String`	`getImageROIRef(int imageIndex, int ROIRefIndex)`
`int`	`getImageROIRefCount(int imageIndex)`
`Double`	`getImagingEnvironmentAirPressure(int imageIndex)`
`PercentFraction`	`getImagingEnvironmentCO2Percent(int imageIndex)`
`PercentFraction`	`getImagingEnvironmentHumidity(int imageIndex)`
`Double`	`getImagingEnvironmentTemperature(int imageIndex)`
`int`	`getInstrumentCount()`
`String`	`getInstrumentID(int instrumentIndex)`
`Color`	`getLabelFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getLabelFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getLabelFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLabelFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getLabelFontStyle(int ROIIndex, int shapeIndex)`
`String`	`getLabelID(int ROIIndex, int shapeIndex)`
`LineCap`	`getLabelLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getLabelLocked(int ROIIndex, int shapeIndex)`
`Color`	`getLabelStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getLabelStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getLabelStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getLabelText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLabelTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLabelTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLabelTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getLabelTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getLabelVisible(int ROIIndex, int shapeIndex)`
`Double`	`getLabelX(int ROIIndex, int shapeIndex)`
`Double`	`getLabelY(int ROIIndex, int shapeIndex)`
`PositiveInteger`	`getLaserFrequencyMultiplication(int instrumentIndex, int lightSourceIndex)`
`String`	`getLaserID(int instrumentIndex, int lightSourceIndex)`
`LaserMedium`	`getLaserLaserMedium(int instrumentIndex, int lightSourceIndex)`
`String`	`getLaserLotNumber(int instrumentIndex, int lightSourceIndex)`
`String`	`getLaserManufacturer(int instrumentIndex, int lightSourceIndex)`
`String`	`getLaserModel(int instrumentIndex, int lightSourceIndex)`
`Boolean`	`getLaserPockelCell(int instrumentIndex, int lightSourceIndex)`
`Double`	`getLaserPower(int instrumentIndex, int lightSourceIndex)`
`Pulse`	`getLaserPulse(int instrumentIndex, int lightSourceIndex)`
`String`	`getLaserPump(int instrumentIndex, int lightSourceIndex)`
`Double`	`getLaserRepetitionRate(int instrumentIndex, int lightSourceIndex)`
`String`	`getLaserSerialNumber(int instrumentIndex, int lightSourceIndex)`
`Boolean`	`getLaserTuneable(int instrumentIndex, int lightSourceIndex)`
`LaserType`	`getLaserType(int instrumentIndex, int lightSourceIndex)`
`PositiveInteger`	`getLaserWavelength(int instrumentIndex, int lightSourceIndex)`
`int`	`getLeaderCount(int experimenterGroupIndex)`
`String`	`getLightEmittingDiodeID(int instrumentIndex, int lightSourceIndex)`
`String`	`getLightEmittingDiodeLotNumber(int instrumentIndex, int lightSourceIndex)`
`String`	`getLightEmittingDiodeManufacturer(int instrumentIndex, int lightSourceIndex)`
`String`	`getLightEmittingDiodeModel(int instrumentIndex, int lightSourceIndex)`
`Double`	`getLightEmittingDiodePower(int instrumentIndex, int lightSourceIndex)`
`String`	`getLightEmittingDiodeSerialNumber(int instrumentIndex, int lightSourceIndex)`
`String`	`getLightPathDichroicRef(int imageIndex, int channelIndex)`
`String`	`getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex)`
`int`	`getLightPathEmissionFilterRefCount(int imageIndex, int channelIndex)`
`String`	`getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex)`
`int`	`getLightPathExcitationFilterRefCount(int imageIndex, int channelIndex)`
`int`	`getLightSourceCount(int instrumentIndex)`
`String`	`getLightSourceType(int instrumentIndex, int lightSourceIndex)`
`Color`	`getLineFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getLineFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getLineFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLineFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getLineFontStyle(int ROIIndex, int shapeIndex)`
`String`	`getLineID(int ROIIndex, int shapeIndex)`
`LineCap`	`getLineLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getLineLocked(int ROIIndex, int shapeIndex)`
`Marker`	`getLineMarkerEnd(int ROIIndex, int shapeIndex)`
`Marker`	`getLineMarkerStart(int ROIIndex, int shapeIndex)`
`Color`	`getLineStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getLineStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getLineStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getLineText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLineTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLineTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getLineTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getLineTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getLineVisible(int ROIIndex, int shapeIndex)`
`Double`	`getLineX1(int ROIIndex, int shapeIndex)`
`Double`	`getLineX2(int ROIIndex, int shapeIndex)`
`Double`	`getLineY1(int ROIIndex, int shapeIndex)`
`Double`	`getLineY2(int ROIIndex, int shapeIndex)`
`int`	`getListAnnotationAnnotationCount(int listAnnotationIndex)`
`String`	`getListAnnotationAnnotationRef(int listAnnotationIndex, int annotationRefIndex)`
`int`	`getListAnnotationCount()`
`String`	`getListAnnotationDescription(int listAnnotationIndex)`
`String`	`getListAnnotationID(int listAnnotationIndex)`
`String`	`getListAnnotationNamespace(int listAnnotationIndex)`
`int`	`getLongAnnotationAnnotationCount(int longAnnotationIndex)`
`String`	`getLongAnnotationAnnotationRef(int longAnnotationIndex, int annotationRefIndex)`
`int`	`getLongAnnotationCount()`
`String`	`getLongAnnotationDescription(int longAnnotationIndex)`
`String`	`getLongAnnotationID(int longAnnotationIndex)`
`String`	`getLongAnnotationNamespace(int longAnnotationIndex)`
`Long`	`getLongAnnotationValue(int longAnnotationIndex)`
`Color`	`getMaskFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getMaskFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getMaskFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getMaskFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getMaskFontStyle(int ROIIndex, int shapeIndex)`
`Double`	`getMaskHeight(int ROIIndex, int shapeIndex)`
`String`	`getMaskID(int ROIIndex, int shapeIndex)`
`LineCap`	`getMaskLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getMaskLocked(int ROIIndex, int shapeIndex)`
`Color`	`getMaskStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getMaskStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getMaskStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getMaskText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getMaskTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getMaskTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getMaskTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getMaskTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getMaskVisible(int ROIIndex, int shapeIndex)`
`Double`	`getMaskWidth(int ROIIndex, int shapeIndex)`
`Double`	`getMaskX(int ROIIndex, int shapeIndex)`
`Double`	`getMaskY(int ROIIndex, int shapeIndex)`
`int`	`getMicrobeamManipulationCount(int experimentIndex)`
`String`	`getMicrobeamManipulationDescription(int experimentIndex, int microbeamManipulationIndex)`
`String`	`getMicrobeamManipulationExperimenterRef(int experimentIndex, int microbeamManipulationIndex)`
`String`	`getMicrobeamManipulationID(int experimentIndex, int microbeamManipulationIndex)`
`PercentFraction`	`getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`
`int`	`getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex, int microbeamManipulationIndex)`
`String`	`getMicrobeamManipulationLightSourceSettingsID(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`
`PositiveInteger`	`getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`
`int`	`getMicrobeamManipulationRefCount(int imageIndex)`
`String`	`getMicrobeamManipulationROIRef(int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)`
`int`	`getMicrobeamManipulationROIRefCount(int experimentIndex, int microbeamManipulationIndex)`
`MicrobeamManipulationType`	`getMicrobeamManipulationType(int experimentIndex, int microbeamManipulationIndex)`
`String`	`getMicroscopeLotNumber(int instrumentIndex)`
`String`	`getMicroscopeManufacturer(int instrumentIndex)`
`String`	`getMicroscopeModel(int instrumentIndex)`
`String`	`getMicroscopeSerialNumber(int instrumentIndex)`
`MicroscopeType`	`getMicroscopeType(int instrumentIndex)`
`Double`	`getObjectiveCalibratedMagnification(int instrumentIndex, int objectiveIndex)`
`Correction`	`getObjectiveCorrection(int instrumentIndex, int objectiveIndex)`
`int`	`getObjectiveCount(int instrumentIndex)`
`String`	`getObjectiveID(int instrumentIndex, int objectiveIndex)`
`Immersion`	`getObjectiveImmersion(int instrumentIndex, int objectiveIndex)`
`Boolean`	`getObjectiveIris(int instrumentIndex, int objectiveIndex)`
`Double`	`getObjectiveLensNA(int instrumentIndex, int objectiveIndex)`
`String`	`getObjectiveLotNumber(int instrumentIndex, int objectiveIndex)`
`String`	`getObjectiveManufacturer(int instrumentIndex, int objectiveIndex)`
`String`	`getObjectiveModel(int instrumentIndex, int objectiveIndex)`
`PositiveInteger`	`getObjectiveNominalMagnification(int instrumentIndex, int objectiveIndex)`
`String`	`getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex)`
`Double`	`getObjectiveSettingsCorrectionCollar(int imageIndex)`
`String`	`getObjectiveSettingsID(int imageIndex)`
`Medium`	`getObjectiveSettingsMedium(int imageIndex)`
`Double`	`getObjectiveSettingsRefractiveIndex(int imageIndex)`
`Double`	`getObjectiveWorkingDistance(int instrumentIndex, int objectiveIndex)`
`String`	`getPixelsAnnotationRef(int imageIndex, int annotationRefIndex)`
`int`	`getPixelsAnnotationRefCount(int imageIndex)`
`Boolean`	`getPixelsBinDataBigEndian(int imageIndex, int binDataIndex)`
`int`	`getPixelsBinDataCount(int imageIndex)`
`DimensionOrder`	`getPixelsDimensionOrder(int imageIndex)`
`String`	`getPixelsID(int imageIndex)`
`PositiveFloat`	`getPixelsPhysicalSizeX(int imageIndex)`
`PositiveFloat`	`getPixelsPhysicalSizeY(int imageIndex)`
`PositiveFloat`	`getPixelsPhysicalSizeZ(int imageIndex)`
`PositiveInteger`	`getPixelsSizeC(int imageIndex)`
`PositiveInteger`	`getPixelsSizeT(int imageIndex)`
`PositiveInteger`	`getPixelsSizeX(int imageIndex)`
`PositiveInteger`	`getPixelsSizeY(int imageIndex)`
`PositiveInteger`	`getPixelsSizeZ(int imageIndex)`
`Double`	`getPixelsTimeIncrement(int imageIndex)`
`PixelType`	`getPixelsType(int imageIndex)`
`String`	`getPlaneAnnotationRef(int imageIndex, int planeIndex, int annotationRefIndex)`
`int`	`getPlaneAnnotationRefCount(int imageIndex, int planeIndex)`
`int`	`getPlaneCount(int imageIndex)`
`Double`	`getPlaneDeltaT(int imageIndex, int planeIndex)`
`Double`	`getPlaneExposureTime(int imageIndex, int planeIndex)`
`String`	`getPlaneHashSHA1(int imageIndex, int planeIndex)`
`Double`	`getPlanePositionX(int imageIndex, int planeIndex)`
`Double`	`getPlanePositionY(int imageIndex, int planeIndex)`
`Double`	`getPlanePositionZ(int imageIndex, int planeIndex)`
`NonNegativeInteger`	`getPlaneTheC(int imageIndex, int planeIndex)`
`NonNegativeInteger`	`getPlaneTheT(int imageIndex, int planeIndex)`
`NonNegativeInteger`	`getPlaneTheZ(int imageIndex, int planeIndex)`
`String`	`getPlateAcquisitionAnnotationRef(int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)`
`int`	`getPlateAcquisitionAnnotationRefCount(int plateIndex, int plateAcquisitionIndex)`
`int`	`getPlateAcquisitionCount(int plateIndex)`
`String`	`getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex)`
`Timestamp`	`getPlateAcquisitionEndTime(int plateIndex, int plateAcquisitionIndex)`
`String`	`getPlateAcquisitionID(int plateIndex, int plateAcquisitionIndex)`
`PositiveInteger`	`getPlateAcquisitionMaximumFieldCount(int plateIndex, int plateAcquisitionIndex)`
`String`	`getPlateAcquisitionName(int plateIndex, int plateAcquisitionIndex)`
`Timestamp`	`getPlateAcquisitionStartTime(int plateIndex, int plateAcquisitionIndex)`
`String`	`getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)`
`String`	`getPlateAnnotationRef(int plateIndex, int annotationRefIndex)`
`int`	`getPlateAnnotationRefCount(int plateIndex)`
`NamingConvention`	`getPlateColumnNamingConvention(int plateIndex)`
`PositiveInteger`	`getPlateColumns(int plateIndex)`
`int`	`getPlateCount()`
`String`	`getPlateDescription(int plateIndex)`
`String`	`getPlateExternalIdentifier(int plateIndex)`
`NonNegativeInteger`	`getPlateFieldIndex(int plateIndex)`
`String`	`getPlateID(int plateIndex)`
`String`	`getPlateName(int plateIndex)`
`int`	`getPlateRefCount(int screenIndex)`
`NamingConvention`	`getPlateRowNamingConvention(int plateIndex)`
`PositiveInteger`	`getPlateRows(int plateIndex)`
`String`	`getPlateStatus(int plateIndex)`
`Double`	`getPlateWellOriginX(int plateIndex)`
`Double`	`getPlateWellOriginY(int plateIndex)`
`Color`	`getPointFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getPointFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getPointFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPointFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getPointFontStyle(int ROIIndex, int shapeIndex)`
`String`	`getPointID(int ROIIndex, int shapeIndex)`
`LineCap`	`getPointLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getPointLocked(int ROIIndex, int shapeIndex)`
`Color`	`getPointStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getPointStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getPointStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getPointText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPointTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPointTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPointTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getPointTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getPointVisible(int ROIIndex, int shapeIndex)`
`Double`	`getPointX(int ROIIndex, int shapeIndex)`
`Double`	`getPointY(int ROIIndex, int shapeIndex)`
`Color`	`getPolygonFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getPolygonFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getPolygonFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolygonFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getPolygonFontStyle(int ROIIndex, int shapeIndex)`
`String`	`getPolygonID(int ROIIndex, int shapeIndex)`
`LineCap`	`getPolygonLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getPolygonLocked(int ROIIndex, int shapeIndex)`
`String`	`getPolygonPoints(int ROIIndex, int shapeIndex)`
`Color`	`getPolygonStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getPolygonStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getPolygonStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getPolygonText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolygonTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolygonTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolygonTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getPolygonTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getPolygonVisible(int ROIIndex, int shapeIndex)`
`Color`	`getPolylineFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getPolylineFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getPolylineFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolylineFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getPolylineFontStyle(int ROIIndex, int shapeIndex)`
`String`	`getPolylineID(int ROIIndex, int shapeIndex)`
`LineCap`	`getPolylineLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getPolylineLocked(int ROIIndex, int shapeIndex)`
`Marker`	`getPolylineMarkerEnd(int ROIIndex, int shapeIndex)`
`Marker`	`getPolylineMarkerStart(int ROIIndex, int shapeIndex)`
`String`	`getPolylinePoints(int ROIIndex, int shapeIndex)`
`Color`	`getPolylineStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getPolylineStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getPolylineStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getPolylineText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolylineTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolylineTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getPolylineTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getPolylineTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getPolylineVisible(int ROIIndex, int shapeIndex)`
`String`	`getProjectAnnotationRef(int projectIndex, int annotationRefIndex)`
`int`	`getProjectAnnotationRefCount(int projectIndex)`
`int`	`getProjectCount()`
`String`	`getProjectDatasetRef(int projectIndex, int datasetRefIndex)`
`String`	`getProjectDescription(int projectIndex)`
`String`	`getProjectExperimenterGroupRef(int projectIndex)`
`String`	`getProjectExperimenterRef(int projectIndex)`
`String`	`getProjectID(int projectIndex)`
`String`	`getProjectName(int projectIndex)`
`String`	`getReagentAnnotationRef(int screenIndex, int reagentIndex, int annotationRefIndex)`
`int`	`getReagentAnnotationRefCount(int screenIndex, int reagentIndex)`
`int`	`getReagentCount(int screenIndex)`
`String`	`getReagentDescription(int screenIndex, int reagentIndex)`
`String`	`getReagentID(int screenIndex, int reagentIndex)`
`String`	`getReagentName(int screenIndex, int reagentIndex)`
`String`	`getReagentReagentIdentifier(int screenIndex, int reagentIndex)`
`Color`	`getRectangleFillColor(int ROIIndex, int shapeIndex)`
`FillRule`	`getRectangleFillRule(int ROIIndex, int shapeIndex)`
`FontFamily`	`getRectangleFontFamily(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getRectangleFontSize(int ROIIndex, int shapeIndex)`
`FontStyle`	`getRectangleFontStyle(int ROIIndex, int shapeIndex)`
`Double`	`getRectangleHeight(int ROIIndex, int shapeIndex)`
`String`	`getRectangleID(int ROIIndex, int shapeIndex)`
`LineCap`	`getRectangleLineCap(int ROIIndex, int shapeIndex)`
`Boolean`	`getRectangleLocked(int ROIIndex, int shapeIndex)`
`Color`	`getRectangleStrokeColor(int ROIIndex, int shapeIndex)`
`String`	`getRectangleStrokeDashArray(int ROIIndex, int shapeIndex)`
`Double`	`getRectangleStrokeWidth(int ROIIndex, int shapeIndex)`
`String`	`getRectangleText(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getRectangleTheC(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getRectangleTheT(int ROIIndex, int shapeIndex)`
`NonNegativeInteger`	`getRectangleTheZ(int ROIIndex, int shapeIndex)`
`AffineTransform`	`getRectangleTransform(int ROIIndex, int shapeIndex)`
`Boolean`	`getRectangleVisible(int ROIIndex, int shapeIndex)`
`Double`	`getRectangleWidth(int ROIIndex, int shapeIndex)`
`Double`	`getRectangleX(int ROIIndex, int shapeIndex)`
`Double`	`getRectangleY(int ROIIndex, int shapeIndex)`
`String`	`getROIAnnotationRef(int ROIIndex, int annotationRefIndex)`
`int`	`getROIAnnotationRefCount(int ROIIndex)`
`int`	`getROICount()`
`String`	`getROIDescription(int ROIIndex)`
`String`	`getROIID(int ROIIndex)`
`String`	`getROIName(int ROIIndex)`
`String`	`getROINamespace(int ROIIndex)`
`String`	`getScreenAnnotationRef(int screenIndex, int annotationRefIndex)`
`int`	`getScreenAnnotationRefCount(int screenIndex)`
`int`	`getScreenCount()`
`String`	`getScreenDescription(int screenIndex)`
`String`	`getScreenID(int screenIndex)`
`String`	`getScreenName(int screenIndex)`
`String`	`getScreenPlateRef(int screenIndex, int plateRefIndex)`
`String`	`getScreenProtocolDescription(int screenIndex)`
`String`	`getScreenProtocolIdentifier(int screenIndex)`
`String`	`getScreenReagentSetDescription(int screenIndex)`
`String`	`getScreenReagentSetIdentifier(int screenIndex)`
`String`	`getScreenType(int screenIndex)`
`int`	`getShapeCount(int ROIIndex)`
`String`	`getShapeType(int roiIndex, int shapeIndex)`
`String`	`getStageLabelName(int imageIndex)`
`Double`	`getStageLabelX(int imageIndex)`
`Double`	`getStageLabelY(int imageIndex)`
`Double`	`getStageLabelZ(int imageIndex)`
`int`	`getTagAnnotationAnnotationCount(int tagAnnotationIndex)`
`String`	`getTagAnnotationAnnotationRef(int tagAnnotationIndex, int annotationRefIndex)`
`int`	`getTagAnnotationCount()`
`String`	`getTagAnnotationDescription(int tagAnnotationIndex)`
`String`	`getTagAnnotationID(int tagAnnotationIndex)`
`String`	`getTagAnnotationNamespace(int tagAnnotationIndex)`
`String`	`getTagAnnotationValue(int tagAnnotationIndex)`
`int`	`getTermAnnotationAnnotationCount(int termAnnotationIndex)`
`String`	`getTermAnnotationAnnotationRef(int termAnnotationIndex, int annotationRefIndex)`
`int`	`getTermAnnotationCount()`
`String`	`getTermAnnotationDescription(int termAnnotationIndex)`
`String`	`getTermAnnotationID(int termAnnotationIndex)`
`String`	`getTermAnnotationNamespace(int termAnnotationIndex)`
`String`	`getTermAnnotationValue(int termAnnotationIndex)`
`int`	`getTiffDataCount(int imageIndex)`
`NonNegativeInteger`	`getTiffDataFirstC(int imageIndex, int tiffDataIndex)`
`NonNegativeInteger`	`getTiffDataFirstT(int imageIndex, int tiffDataIndex)`
`NonNegativeInteger`	`getTiffDataFirstZ(int imageIndex, int tiffDataIndex)`
`NonNegativeInteger`	`getTiffDataIFD(int imageIndex, int tiffDataIndex)`
`NonNegativeInteger`	`getTiffDataPlaneCount(int imageIndex, int tiffDataIndex)`
`int`	`getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)`
`String`	`getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex, int annotationRefIndex)`
`int`	`getTimestampAnnotationCount()`
`String`	`getTimestampAnnotationDescription(int timestampAnnotationIndex)`
`String`	`getTimestampAnnotationID(int timestampAnnotationIndex)`
`String`	`getTimestampAnnotationNamespace(int timestampAnnotationIndex)`
`Timestamp`	`getTimestampAnnotationValue(int timestampAnnotationIndex)`
`PositiveInteger`	`getTransmittanceRangeCutIn(int instrumentIndex, int filterIndex)`
`NonNegativeInteger`	`getTransmittanceRangeCutInTolerance(int instrumentIndex, int filterIndex)`
`PositiveInteger`	`getTransmittanceRangeCutOut(int instrumentIndex, int filterIndex)`
`NonNegativeInteger`	`getTransmittanceRangeCutOutTolerance(int instrumentIndex, int filterIndex)`
`PercentFraction`	`getTransmittanceRangeTransmittance(int instrumentIndex, int filterIndex)`
`String`	`getUUID()` Gets the UUID associated with this collection of metadata.
`String`	`getUUIDFileName(int imageIndex, int tiffDataIndex)`
`String`	`getUUIDValue(int imageIndex, int tiffDataIndex)`
`String`	`getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex)`
`int`	`getWellAnnotationRefCount(int plateIndex, int wellIndex)`
`Color`	`getWellColor(int plateIndex, int wellIndex)`
`NonNegativeInteger`	`getWellColumn(int plateIndex, int wellIndex)`
`int`	`getWellCount(int plateIndex)`
`String`	`getWellExternalDescription(int plateIndex, int wellIndex)`
`String`	`getWellExternalIdentifier(int plateIndex, int wellIndex)`
`String`	`getWellID(int plateIndex, int wellIndex)`
`String`	`getWellReagentRef(int plateIndex, int wellIndex)`
`NonNegativeInteger`	`getWellRow(int plateIndex, int wellIndex)`
`String`	`getWellSampleAnnotationRef(int plateIndex, int wellIndex, int wellSampleIndex, int annotationRefIndex)`
`int`	`getWellSampleAnnotationRefCount(int plateIndex, int wellIndex, int wellSampleIndex)`
`int`	`getWellSampleCount(int plateIndex, int wellIndex)`
`String`	`getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex)`
`String`	`getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex)`
`NonNegativeInteger`	`getWellSampleIndex(int plateIndex, int wellIndex, int wellSampleIndex)`
`Double`	`getWellSamplePositionX(int plateIndex, int wellIndex, int wellSampleIndex)`
`Double`	`getWellSamplePositionY(int plateIndex, int wellIndex, int wellSampleIndex)`
`int`	`getWellSampleRefCount(int plateIndex, int plateAcquisitionIndex)`
`Timestamp`	`getWellSampleTimepoint(int plateIndex, int wellIndex, int wellSampleIndex)`
`String`	`getWellType(int plateIndex, int wellIndex)`
`int`	`getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)`
`String`	`getXMLAnnotationAnnotationRef(int XMLAnnotationIndex, int annotationRefIndex)`
`int`	`getXMLAnnotationCount()`
`String`	`getXMLAnnotationDescription(int XMLAnnotationIndex)`
`String`	`getXMLAnnotationID(int XMLAnnotationIndex)`
`String`	`getXMLAnnotationNamespace(int XMLAnnotationIndex)`
`String`	`getXMLAnnotationValue(int XMLAnnotationIndex)`

Method Detail

getPixelsBinDataCount

int getPixelsBinDataCount(int imageIndex)

getBooleanAnnotationAnnotationCount

int getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)

getCommentAnnotationAnnotationCount

int getCommentAnnotationAnnotationCount(int commentAnnotationIndex)

getDoubleAnnotationAnnotationCount

int getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)

getFileAnnotationAnnotationCount

int getFileAnnotationAnnotationCount(int fileAnnotationIndex)

getListAnnotationAnnotationCount

int getListAnnotationAnnotationCount(int listAnnotationIndex)

getLongAnnotationAnnotationCount

int getLongAnnotationAnnotationCount(int longAnnotationIndex)

getTagAnnotationAnnotationCount

int getTagAnnotationAnnotationCount(int tagAnnotationIndex)

getTermAnnotationAnnotationCount

int getTermAnnotationAnnotationCount(int termAnnotationIndex)

getTimestampAnnotationAnnotationCount

int getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)

getXMLAnnotationAnnotationCount

int getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)

getLightSourceType

String getLightSourceType(int instrumentIndex,
                        int lightSourceIndex)

getShapeType

String getShapeType(int roiIndex,
                  int shapeIndex)

getROIAnnotationRefCount

int getROIAnnotationRefCount(int ROIIndex)

getPlateAcquisitionAnnotationRefCount

int getPlateAcquisitionAnnotationRefCount(int plateIndex,
                                        int plateAcquisitionIndex)

getPlateAnnotationRefCount

int getPlateAnnotationRefCount(int plateIndex)

getExperimenterGroupAnnotationRefCount

int getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)

getImageAnnotationRefCount

int getImageAnnotationRefCount(int imageIndex)

getScreenAnnotationRefCount

int getScreenAnnotationRefCount(int screenIndex)

getWellAnnotationRefCount

int getWellAnnotationRefCount(int plateIndex,
                            int wellIndex)

getDatasetAnnotationRefCount

int getDatasetAnnotationRefCount(int datasetIndex)

getProjectAnnotationRefCount

int getProjectAnnotationRefCount(int projectIndex)

getReagentAnnotationRefCount

int getReagentAnnotationRefCount(int screenIndex,
                               int reagentIndex)

getPlaneAnnotationRefCount

int getPlaneAnnotationRefCount(int imageIndex,
                             int planeIndex)

getExperimenterAnnotationRefCount

int getExperimenterAnnotationRefCount(int experimenterIndex)

getWellSampleAnnotationRefCount

int getWellSampleAnnotationRefCount(int plateIndex,
                                  int wellIndex,
                                  int wellSampleIndex)

getPixelsAnnotationRefCount

int getPixelsAnnotationRefCount(int imageIndex)

getChannelAnnotationRefCount

int getChannelAnnotationRefCount(int imageIndex,
                               int channelIndex)

getBooleanAnnotationCount
```
int getBooleanAnnotationCount()
```

getChannelCount
```
int getChannelCount(int imageIndex)
```

getCommentAnnotationCount
```
int getCommentAnnotationCount()
```

getDatasetCount
```
int getDatasetCount()
```

getDatasetRefCount

int getDatasetRefCount(int projectIndex)

getDetectorCount

int getDetectorCount(int instrumentIndex)

getDichroicCount

int getDichroicCount(int instrumentIndex)

getDoubleAnnotationCount
```
int getDoubleAnnotationCount()
```

getLightPathEmissionFilterRefCount

int getLightPathEmissionFilterRefCount(int imageIndex,
                                     int channelIndex)

getFilterSetEmissionFilterRefCount

int getFilterSetEmissionFilterRefCount(int instrumentIndex,
                                     int filterSetIndex)

getLightPathExcitationFilterRefCount

int getLightPathExcitationFilterRefCount(int imageIndex,
                                       int channelIndex)

getFilterSetExcitationFilterRefCount

int getFilterSetExcitationFilterRefCount(int instrumentIndex,
                                       int filterSetIndex)

getExperimentCount
```
int getExperimentCount()
```

getExperimenterCount
```
int getExperimenterCount()
```

getExperimenterGroupCount
```
int getExperimenterGroupCount()
```

getExperimenterGroupExperimenterRefCount

int getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)

getFileAnnotationCount
```
int getFileAnnotationCount()
```

getFilterCount

int getFilterCount(int instrumentIndex)

getFilterSetCount

int getFilterSetCount(int instrumentIndex)

getImageCount
```
int getImageCount()
```

getDatasetImageRefCount

int getDatasetImageRefCount(int datasetIndex)

getInstrumentCount
```
int getInstrumentCount()
```

getLeaderCount

int getLeaderCount(int experimenterGroupIndex)

getLightSourceCount

int getLightSourceCount(int instrumentIndex)

getMicrobeamManipulationLightSourceSettingsCount

int getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex,
                                                   int microbeamManipulationIndex)

getListAnnotationCount
```
int getListAnnotationCount()
```

getLongAnnotationCount
```
int getLongAnnotationCount()
```

getMicrobeamManipulationCount

int getMicrobeamManipulationCount(int experimentIndex)

getMicrobeamManipulationRefCount

int getMicrobeamManipulationRefCount(int imageIndex)

getObjectiveCount

int getObjectiveCount(int instrumentIndex)

getPlaneCount
```
int getPlaneCount(int imageIndex)
```

getPlateCount
```
int getPlateCount()
```

getPlateAcquisitionCount

int getPlateAcquisitionCount(int plateIndex)

getPlateRefCount
```
int getPlateRefCount(int screenIndex)
```

getProjectCount
```
int getProjectCount()
```

getROICount
```
int getROICount()
```

getImageROIRefCount

int getImageROIRefCount(int imageIndex)

getMicrobeamManipulationROIRefCount

int getMicrobeamManipulationROIRefCount(int experimentIndex,
                                      int microbeamManipulationIndex)

getReagentCount
```
int getReagentCount(int screenIndex)
```

getScreenCount
```
int getScreenCount()
```

getShapeCount
```
int getShapeCount(int ROIIndex)
```

getTagAnnotationCount
```
int getTagAnnotationCount()
```

getTermAnnotationCount
```
int getTermAnnotationCount()
```

getTiffDataCount
```
int getTiffDataCount(int imageIndex)
```

getTimestampAnnotationCount
```
int getTimestampAnnotationCount()
```

getUUIDValue

String getUUIDValue(int imageIndex,
                  int tiffDataIndex)

getWellCount
```
int getWellCount(int plateIndex)
```

getWellSampleCount

int getWellSampleCount(int plateIndex,
                     int wellIndex)

getWellSampleRefCount

int getWellSampleRefCount(int plateIndex,
                        int plateAcquisitionIndex)

getXMLAnnotationCount
```
int getXMLAnnotationCount()
```

getPixelsBinDataBigEndian

Boolean getPixelsBinDataBigEndian(int imageIndex,
                                int binDataIndex)

getUUID
```
String getUUID()
```
Gets the UUID associated with this collection of metadata.

getArcID

String getArcID(int instrumentIndex,
              int lightSourceIndex)

getArcLotNumber

String getArcLotNumber(int instrumentIndex,
                     int lightSourceIndex)

getArcManufacturer

String getArcManufacturer(int instrumentIndex,
                        int lightSourceIndex)

getArcModel

String getArcModel(int instrumentIndex,
                 int lightSourceIndex)

getArcPower

Double getArcPower(int instrumentIndex,
                 int lightSourceIndex)

getArcSerialNumber

String getArcSerialNumber(int instrumentIndex,
                        int lightSourceIndex)

getArcType

ArcType getArcType(int instrumentIndex,
                 int lightSourceIndex)

getBinaryFileFileName

String getBinaryFileFileName(int fileAnnotationIndex)

getBinaryFileMIMEType

String getBinaryFileMIMEType(int fileAnnotationIndex)

getBinaryFileSize

NonNegativeLong getBinaryFileSize(int fileAnnotationIndex)

getBinaryOnlyMetadataFile

String getBinaryOnlyMetadataFile(int metadataFileIndex)

getBinaryOnlyUUID

String getBinaryOnlyUUID(int UUIDIndex)

getBooleanAnnotationAnnotationRef

String getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex,
                                       int annotationRefIndex)

getBooleanAnnotationDescription

String getBooleanAnnotationDescription(int booleanAnnotationIndex)

getBooleanAnnotationID

String getBooleanAnnotationID(int booleanAnnotationIndex)

getBooleanAnnotationNamespace

String getBooleanAnnotationNamespace(int booleanAnnotationIndex)

getBooleanAnnotationValue

Boolean getBooleanAnnotationValue(int booleanAnnotationIndex)

getChannelAcquisitionMode

AcquisitionMode getChannelAcquisitionMode(int imageIndex,
                                        int channelIndex)

getChannelAnnotationRef

String getChannelAnnotationRef(int imageIndex,
                             int channelIndex,
                             int annotationRefIndex)

getChannelColor

Color getChannelColor(int imageIndex,
                    int channelIndex)

getChannelContrastMethod

ContrastMethod getChannelContrastMethod(int imageIndex,
                                      int channelIndex)

getChannelEmissionWavelength

PositiveInteger getChannelEmissionWavelength(int imageIndex,
                                           int channelIndex)

getChannelExcitationWavelength

PositiveInteger getChannelExcitationWavelength(int imageIndex,
                                             int channelIndex)

getChannelFilterSetRef

String getChannelFilterSetRef(int imageIndex,
                            int channelIndex)

getChannelFluor

String getChannelFluor(int imageIndex,
                     int channelIndex)

getChannelID

String getChannelID(int imageIndex,
                  int channelIndex)

getChannelIlluminationType

IlluminationType getChannelIlluminationType(int imageIndex,
                                          int channelIndex)

getChannelNDFilter

Double getChannelNDFilter(int imageIndex,
                        int channelIndex)

getChannelName

String getChannelName(int imageIndex,
                    int channelIndex)

getChannelPinholeSize

Double getChannelPinholeSize(int imageIndex,
                           int channelIndex)

getChannelPockelCellSetting

Integer getChannelPockelCellSetting(int imageIndex,
                                  int channelIndex)

getChannelSamplesPerPixel

PositiveInteger getChannelSamplesPerPixel(int imageIndex,
                                        int channelIndex)

getCommentAnnotationAnnotationRef

String getCommentAnnotationAnnotationRef(int commentAnnotationIndex,
                                       int annotationRefIndex)

getCommentAnnotationDescription

String getCommentAnnotationDescription(int commentAnnotationIndex)

getCommentAnnotationID

String getCommentAnnotationID(int commentAnnotationIndex)

getCommentAnnotationNamespace

String getCommentAnnotationNamespace(int commentAnnotationIndex)

getCommentAnnotationValue

String getCommentAnnotationValue(int commentAnnotationIndex)

getDatasetAnnotationRef

String getDatasetAnnotationRef(int datasetIndex,
                             int annotationRefIndex)

getDatasetDescription

String getDatasetDescription(int datasetIndex)

getDatasetExperimenterGroupRef

String getDatasetExperimenterGroupRef(int datasetIndex)

getDatasetExperimenterRef

String getDatasetExperimenterRef(int datasetIndex)

getDatasetID
```
String getDatasetID(int datasetIndex)
```

getDatasetImageRef

String getDatasetImageRef(int datasetIndex,
                        int imageRefIndex)

getDatasetName

String getDatasetName(int datasetIndex)

getDetectorAmplificationGain

Double getDetectorAmplificationGain(int instrumentIndex,
                                  int detectorIndex)

getDetectorGain

Double getDetectorGain(int instrumentIndex,
                     int detectorIndex)

getDetectorID

String getDetectorID(int instrumentIndex,
                   int detectorIndex)

getDetectorLotNumber

String getDetectorLotNumber(int instrumentIndex,
                          int detectorIndex)

getDetectorManufacturer

String getDetectorManufacturer(int instrumentIndex,
                             int detectorIndex)

getDetectorModel

String getDetectorModel(int instrumentIndex,
                      int detectorIndex)

getDetectorOffset

Double getDetectorOffset(int instrumentIndex,
                       int detectorIndex)

getDetectorSerialNumber

String getDetectorSerialNumber(int instrumentIndex,
                             int detectorIndex)

getDetectorType

DetectorType getDetectorType(int instrumentIndex,
                           int detectorIndex)

getDetectorVoltage

Double getDetectorVoltage(int instrumentIndex,
                        int detectorIndex)

getDetectorZoom

Double getDetectorZoom(int instrumentIndex,
                     int detectorIndex)

getDetectorSettingsBinning

Binning getDetectorSettingsBinning(int imageIndex,
                                 int channelIndex)

getDetectorSettingsGain

Double getDetectorSettingsGain(int imageIndex,
                             int channelIndex)

getDetectorSettingsID

String getDetectorSettingsID(int imageIndex,
                           int channelIndex)

getDetectorSettingsOffset

Double getDetectorSettingsOffset(int imageIndex,
                               int channelIndex)

getDetectorSettingsReadOutRate

Double getDetectorSettingsReadOutRate(int imageIndex,
                                    int channelIndex)

getDetectorSettingsVoltage

Double getDetectorSettingsVoltage(int imageIndex,
                                int channelIndex)

getDichroicID

String getDichroicID(int instrumentIndex,
                   int dichroicIndex)

getDichroicLotNumber

String getDichroicLotNumber(int instrumentIndex,
                          int dichroicIndex)

getDichroicManufacturer

String getDichroicManufacturer(int instrumentIndex,
                             int dichroicIndex)

getDichroicModel

String getDichroicModel(int instrumentIndex,
                      int dichroicIndex)

getDichroicSerialNumber

String getDichroicSerialNumber(int instrumentIndex,
                             int dichroicIndex)

getDoubleAnnotationAnnotationRef

String getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex,
                                      int annotationRefIndex)

getDoubleAnnotationDescription

String getDoubleAnnotationDescription(int doubleAnnotationIndex)

getDoubleAnnotationID

String getDoubleAnnotationID(int doubleAnnotationIndex)

getDoubleAnnotationNamespace

String getDoubleAnnotationNamespace(int doubleAnnotationIndex)

getDoubleAnnotationValue

Double getDoubleAnnotationValue(int doubleAnnotationIndex)

getEllipseFillColor

Color getEllipseFillColor(int ROIIndex,
                        int shapeIndex)

getEllipseFillRule

FillRule getEllipseFillRule(int ROIIndex,
                          int shapeIndex)

getEllipseFontFamily

FontFamily getEllipseFontFamily(int ROIIndex,
                              int shapeIndex)

getEllipseFontSize

NonNegativeInteger getEllipseFontSize(int ROIIndex,
                                    int shapeIndex)

getEllipseFontStyle

FontStyle getEllipseFontStyle(int ROIIndex,
                            int shapeIndex)

getEllipseID

String getEllipseID(int ROIIndex,
                  int shapeIndex)

getEllipseLineCap

LineCap getEllipseLineCap(int ROIIndex,
                        int shapeIndex)

getEllipseLocked

Boolean getEllipseLocked(int ROIIndex,
                       int shapeIndex)

getEllipseStrokeColor

Color getEllipseStrokeColor(int ROIIndex,
                          int shapeIndex)

getEllipseStrokeDashArray

String getEllipseStrokeDashArray(int ROIIndex,
                               int shapeIndex)

getEllipseStrokeWidth

Double getEllipseStrokeWidth(int ROIIndex,
                           int shapeIndex)

getEllipseText

String getEllipseText(int ROIIndex,
                    int shapeIndex)

getEllipseTheC

NonNegativeInteger getEllipseTheC(int ROIIndex,
                                int shapeIndex)

getEllipseTheT

NonNegativeInteger getEllipseTheT(int ROIIndex,
                                int shapeIndex)

getEllipseTheZ

NonNegativeInteger getEllipseTheZ(int ROIIndex,
                                int shapeIndex)

getEllipseTransform

AffineTransform getEllipseTransform(int ROIIndex,
                                  int shapeIndex)

getEllipseVisible

Boolean getEllipseVisible(int ROIIndex,
                        int shapeIndex)

getEllipseRadiusX

Double getEllipseRadiusX(int ROIIndex,
                       int shapeIndex)

getEllipseRadiusY

Double getEllipseRadiusY(int ROIIndex,
                       int shapeIndex)

getEllipseX

Double getEllipseX(int ROIIndex,
                 int shapeIndex)

getEllipseY

Double getEllipseY(int ROIIndex,
                 int shapeIndex)

getExperimentDescription

String getExperimentDescription(int experimentIndex)

getExperimentExperimenterRef

String getExperimentExperimenterRef(int experimentIndex)

getExperimentID

String getExperimentID(int experimentIndex)

getExperimentType

ExperimentType getExperimentType(int experimentIndex)

getExperimenterAnnotationRef

String getExperimenterAnnotationRef(int experimenterIndex,
                                  int annotationRefIndex)

getExperimenterEmail

String getExperimenterEmail(int experimenterIndex)

getExperimenterFirstName

String getExperimenterFirstName(int experimenterIndex)

getExperimenterID

String getExperimenterID(int experimenterIndex)

getExperimenterInstitution

String getExperimenterInstitution(int experimenterIndex)

getExperimenterLastName

String getExperimenterLastName(int experimenterIndex)

getExperimenterMiddleName

String getExperimenterMiddleName(int experimenterIndex)

getExperimenterUserName

String getExperimenterUserName(int experimenterIndex)

getExperimenterGroupAnnotationRef

String getExperimenterGroupAnnotationRef(int experimenterGroupIndex,
                                       int annotationRefIndex)

getExperimenterGroupDescription

String getExperimenterGroupDescription(int experimenterGroupIndex)

getExperimenterGroupExperimenterRef

String getExperimenterGroupExperimenterRef(int experimenterGroupIndex,
                                         int experimenterRefIndex)

getExperimenterGroupID

String getExperimenterGroupID(int experimenterGroupIndex)

getExperimenterGroupLeader

String getExperimenterGroupLeader(int experimenterGroupIndex,
                                int leaderIndex)

getExperimenterGroupName

String getExperimenterGroupName(int experimenterGroupIndex)

getFilamentID

String getFilamentID(int instrumentIndex,
                   int lightSourceIndex)

getFilamentLotNumber

String getFilamentLotNumber(int instrumentIndex,
                          int lightSourceIndex)

getFilamentManufacturer

String getFilamentManufacturer(int instrumentIndex,
                             int lightSourceIndex)

getFilamentModel

String getFilamentModel(int instrumentIndex,
                      int lightSourceIndex)

getFilamentPower

Double getFilamentPower(int instrumentIndex,
                      int lightSourceIndex)

getFilamentSerialNumber

String getFilamentSerialNumber(int instrumentIndex,
                             int lightSourceIndex)

getFilamentType

FilamentType getFilamentType(int instrumentIndex,
                           int lightSourceIndex)

getFileAnnotationAnnotationRef

String getFileAnnotationAnnotationRef(int fileAnnotationIndex,
                                    int annotationRefIndex)

getFileAnnotationDescription

String getFileAnnotationDescription(int fileAnnotationIndex)

getFileAnnotationID

String getFileAnnotationID(int fileAnnotationIndex)

getFileAnnotationNamespace

String getFileAnnotationNamespace(int fileAnnotationIndex)

getFilterFilterWheel

String getFilterFilterWheel(int instrumentIndex,
                          int filterIndex)

getFilterID

String getFilterID(int instrumentIndex,
                 int filterIndex)

getFilterLotNumber

String getFilterLotNumber(int instrumentIndex,
                        int filterIndex)

getFilterManufacturer

String getFilterManufacturer(int instrumentIndex,
                           int filterIndex)

getFilterModel

String getFilterModel(int instrumentIndex,
                    int filterIndex)

getFilterSerialNumber

String getFilterSerialNumber(int instrumentIndex,
                           int filterIndex)

getFilterType

FilterType getFilterType(int instrumentIndex,
                       int filterIndex)

getFilterSetDichroicRef

String getFilterSetDichroicRef(int instrumentIndex,
                             int filterSetIndex)

getFilterSetEmissionFilterRef

String getFilterSetEmissionFilterRef(int instrumentIndex,
                                   int filterSetIndex,
                                   int emissionFilterRefIndex)

getFilterSetExcitationFilterRef

String getFilterSetExcitationFilterRef(int instrumentIndex,
                                     int filterSetIndex,
                                     int excitationFilterRefIndex)

getFilterSetID

String getFilterSetID(int instrumentIndex,
                    int filterSetIndex)

getFilterSetLotNumber

String getFilterSetLotNumber(int instrumentIndex,
                           int filterSetIndex)

getFilterSetManufacturer

String getFilterSetManufacturer(int instrumentIndex,
                              int filterSetIndex)

getFilterSetModel

String getFilterSetModel(int instrumentIndex,
                       int filterSetIndex)

getFilterSetSerialNumber

String getFilterSetSerialNumber(int instrumentIndex,
                              int filterSetIndex)

getImageAcquisitionDate

Timestamp getImageAcquisitionDate(int imageIndex)

getImageAnnotationRef

String getImageAnnotationRef(int imageIndex,
                           int annotationRefIndex)

getImageDescription

String getImageDescription(int imageIndex)

getImageExperimentRef

String getImageExperimentRef(int imageIndex)

getImageExperimenterGroupRef

String getImageExperimenterGroupRef(int imageIndex)

getImageExperimenterRef

String getImageExperimenterRef(int imageIndex)

getImageID
```
String getImageID(int imageIndex)
```

getImageInstrumentRef

String getImageInstrumentRef(int imageIndex)

getImageMicrobeamManipulationRef

String getImageMicrobeamManipulationRef(int imageIndex,
                                      int microbeamManipulationRefIndex)

getImageName
```
String getImageName(int imageIndex)
```

getImageROIRef

String getImageROIRef(int imageIndex,
                    int ROIRefIndex)

getImagingEnvironmentAirPressure

Double getImagingEnvironmentAirPressure(int imageIndex)

getImagingEnvironmentCO2Percent

PercentFraction getImagingEnvironmentCO2Percent(int imageIndex)

getImagingEnvironmentHumidity

PercentFraction getImagingEnvironmentHumidity(int imageIndex)

getImagingEnvironmentTemperature

Double getImagingEnvironmentTemperature(int imageIndex)

getInstrumentID

String getInstrumentID(int instrumentIndex)

getLabelFillColor

Color getLabelFillColor(int ROIIndex,
                      int shapeIndex)

getLabelFillRule

FillRule getLabelFillRule(int ROIIndex,
                        int shapeIndex)

getLabelFontFamily

FontFamily getLabelFontFamily(int ROIIndex,
                            int shapeIndex)

getLabelFontSize

NonNegativeInteger getLabelFontSize(int ROIIndex,
                                  int shapeIndex)

getLabelFontStyle

FontStyle getLabelFontStyle(int ROIIndex,
                          int shapeIndex)

getLabelID

String getLabelID(int ROIIndex,
                int shapeIndex)

getLabelLineCap

LineCap getLabelLineCap(int ROIIndex,
                      int shapeIndex)

getLabelLocked

Boolean getLabelLocked(int ROIIndex,
                     int shapeIndex)

getLabelStrokeColor

Color getLabelStrokeColor(int ROIIndex,
                        int shapeIndex)

getLabelStrokeDashArray

String getLabelStrokeDashArray(int ROIIndex,
                             int shapeIndex)

getLabelStrokeWidth

Double getLabelStrokeWidth(int ROIIndex,
                         int shapeIndex)

getLabelText

String getLabelText(int ROIIndex,
                  int shapeIndex)

getLabelTheC

NonNegativeInteger getLabelTheC(int ROIIndex,
                              int shapeIndex)

getLabelTheT

NonNegativeInteger getLabelTheT(int ROIIndex,
                              int shapeIndex)

getLabelTheZ

NonNegativeInteger getLabelTheZ(int ROIIndex,
                              int shapeIndex)

getLabelTransform

AffineTransform getLabelTransform(int ROIIndex,
                                int shapeIndex)

getLabelVisible

Boolean getLabelVisible(int ROIIndex,
                      int shapeIndex)

getLabelX

Double getLabelX(int ROIIndex,
               int shapeIndex)

getLabelY

Double getLabelY(int ROIIndex,
               int shapeIndex)

getLaserID

String getLaserID(int instrumentIndex,
                int lightSourceIndex)

getLaserLotNumber

String getLaserLotNumber(int instrumentIndex,
                       int lightSourceIndex)

getLaserManufacturer

String getLaserManufacturer(int instrumentIndex,
                          int lightSourceIndex)

getLaserModel

String getLaserModel(int instrumentIndex,
                   int lightSourceIndex)

getLaserPower

Double getLaserPower(int instrumentIndex,
                   int lightSourceIndex)

getLaserSerialNumber

String getLaserSerialNumber(int instrumentIndex,
                          int lightSourceIndex)

getLaserFrequencyMultiplication

PositiveInteger getLaserFrequencyMultiplication(int instrumentIndex,
                                              int lightSourceIndex)

getLaserLaserMedium

LaserMedium getLaserLaserMedium(int instrumentIndex,
                              int lightSourceIndex)

getLaserPockelCell

Boolean getLaserPockelCell(int instrumentIndex,
                         int lightSourceIndex)

getLaserPulse

Pulse getLaserPulse(int instrumentIndex,
                  int lightSourceIndex)

getLaserPump

String getLaserPump(int instrumentIndex,
                  int lightSourceIndex)

getLaserRepetitionRate

Double getLaserRepetitionRate(int instrumentIndex,
                            int lightSourceIndex)

getLaserTuneable

Boolean getLaserTuneable(int instrumentIndex,
                       int lightSourceIndex)

getLaserType

LaserType getLaserType(int instrumentIndex,
                     int lightSourceIndex)

getLaserWavelength

PositiveInteger getLaserWavelength(int instrumentIndex,
                                 int lightSourceIndex)

getLightEmittingDiodeID

String getLightEmittingDiodeID(int instrumentIndex,
                             int lightSourceIndex)

getLightEmittingDiodeLotNumber

String getLightEmittingDiodeLotNumber(int instrumentIndex,
                                    int lightSourceIndex)

getLightEmittingDiodeManufacturer

String getLightEmittingDiodeManufacturer(int instrumentIndex,
                                       int lightSourceIndex)

getLightEmittingDiodeModel

String getLightEmittingDiodeModel(int instrumentIndex,
                                int lightSourceIndex)

getLightEmittingDiodePower

Double getLightEmittingDiodePower(int instrumentIndex,
                                int lightSourceIndex)

getLightEmittingDiodeSerialNumber

String getLightEmittingDiodeSerialNumber(int instrumentIndex,
                                       int lightSourceIndex)

getLightPathDichroicRef

String getLightPathDichroicRef(int imageIndex,
                             int channelIndex)

getLightPathEmissionFilterRef

String getLightPathEmissionFilterRef(int imageIndex,
                                   int channelIndex,
                                   int emissionFilterRefIndex)

getLightPathExcitationFilterRef

String getLightPathExcitationFilterRef(int imageIndex,
                                     int channelIndex,
                                     int excitationFilterRefIndex)

getChannelLightSourceSettingsAttenuation

PercentFraction getChannelLightSourceSettingsAttenuation(int imageIndex,
                                                       int channelIndex)

getMicrobeamManipulationLightSourceSettingsAttenuation

PercentFraction getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex,
                                                                     int microbeamManipulationIndex,
                                                                     int lightSourceSettingsIndex)

getChannelLightSourceSettingsID

String getChannelLightSourceSettingsID(int imageIndex,
                                     int channelIndex)

getMicrobeamManipulationLightSourceSettingsID

String getMicrobeamManipulationLightSourceSettingsID(int experimentIndex,
                                                   int microbeamManipulationIndex,
                                                   int lightSourceSettingsIndex)

getChannelLightSourceSettingsWavelength

PositiveInteger getChannelLightSourceSettingsWavelength(int imageIndex,
                                                      int channelIndex)

getMicrobeamManipulationLightSourceSettingsWavelength

PositiveInteger getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex,
                                                                    int microbeamManipulationIndex,
                                                                    int lightSourceSettingsIndex)

getLineFillColor

Color getLineFillColor(int ROIIndex,
                     int shapeIndex)

getLineFillRule

FillRule getLineFillRule(int ROIIndex,
                       int shapeIndex)

getLineFontFamily

FontFamily getLineFontFamily(int ROIIndex,
                           int shapeIndex)

getLineFontSize

NonNegativeInteger getLineFontSize(int ROIIndex,
                                 int shapeIndex)

getLineFontStyle

FontStyle getLineFontStyle(int ROIIndex,
                         int shapeIndex)

getLineID

String getLineID(int ROIIndex,
               int shapeIndex)

getLineLineCap

LineCap getLineLineCap(int ROIIndex,
                     int shapeIndex)

getLineLocked

Boolean getLineLocked(int ROIIndex,
                    int shapeIndex)

getLineStrokeColor

Color getLineStrokeColor(int ROIIndex,
                       int shapeIndex)

getLineStrokeDashArray

String getLineStrokeDashArray(int ROIIndex,
                            int shapeIndex)

getLineStrokeWidth

Double getLineStrokeWidth(int ROIIndex,
                        int shapeIndex)

getLineText

String getLineText(int ROIIndex,
                 int shapeIndex)

getLineTheC

NonNegativeInteger getLineTheC(int ROIIndex,
                             int shapeIndex)

getLineTheT

NonNegativeInteger getLineTheT(int ROIIndex,
                             int shapeIndex)

getLineTheZ

NonNegativeInteger getLineTheZ(int ROIIndex,
                             int shapeIndex)

getLineTransform

AffineTransform getLineTransform(int ROIIndex,
                               int shapeIndex)

getLineVisible

Boolean getLineVisible(int ROIIndex,
                     int shapeIndex)

getLineMarkerEnd

Marker getLineMarkerEnd(int ROIIndex,
                      int shapeIndex)

getLineMarkerStart

Marker getLineMarkerStart(int ROIIndex,
                        int shapeIndex)

getLineX1

Double getLineX1(int ROIIndex,
               int shapeIndex)

getLineX2

Double getLineX2(int ROIIndex,
               int shapeIndex)

getLineY1

Double getLineY1(int ROIIndex,
               int shapeIndex)

getLineY2

Double getLineY2(int ROIIndex,
               int shapeIndex)

getListAnnotationAnnotationRef

String getListAnnotationAnnotationRef(int listAnnotationIndex,
                                    int annotationRefIndex)

getListAnnotationDescription

String getListAnnotationDescription(int listAnnotationIndex)

getListAnnotationID

String getListAnnotationID(int listAnnotationIndex)

getListAnnotationNamespace

String getListAnnotationNamespace(int listAnnotationIndex)

getLongAnnotationAnnotationRef

String getLongAnnotationAnnotationRef(int longAnnotationIndex,
                                    int annotationRefIndex)

getLongAnnotationDescription

String getLongAnnotationDescription(int longAnnotationIndex)

getLongAnnotationID

String getLongAnnotationID(int longAnnotationIndex)

getLongAnnotationNamespace

String getLongAnnotationNamespace(int longAnnotationIndex)

getLongAnnotationValue

Long getLongAnnotationValue(int longAnnotationIndex)

getMaskFillColor

Color getMaskFillColor(int ROIIndex,
                     int shapeIndex)

getMaskFillRule

FillRule getMaskFillRule(int ROIIndex,
                       int shapeIndex)

getMaskFontFamily

FontFamily getMaskFontFamily(int ROIIndex,
                           int shapeIndex)

getMaskFontSize

NonNegativeInteger getMaskFontSize(int ROIIndex,
                                 int shapeIndex)

getMaskFontStyle

FontStyle getMaskFontStyle(int ROIIndex,
                         int shapeIndex)

getMaskID

String getMaskID(int ROIIndex,
               int shapeIndex)

getMaskLineCap

LineCap getMaskLineCap(int ROIIndex,
                     int shapeIndex)

getMaskLocked

Boolean getMaskLocked(int ROIIndex,
                    int shapeIndex)

getMaskStrokeColor

Color getMaskStrokeColor(int ROIIndex,
                       int shapeIndex)

getMaskStrokeDashArray

String getMaskStrokeDashArray(int ROIIndex,
                            int shapeIndex)

getMaskStrokeWidth

Double getMaskStrokeWidth(int ROIIndex,
                        int shapeIndex)

getMaskText

String getMaskText(int ROIIndex,
                 int shapeIndex)

getMaskTheC

NonNegativeInteger getMaskTheC(int ROIIndex,
                             int shapeIndex)

getMaskTheT

NonNegativeInteger getMaskTheT(int ROIIndex,
                             int shapeIndex)

getMaskTheZ

NonNegativeInteger getMaskTheZ(int ROIIndex,
                             int shapeIndex)

getMaskTransform

AffineTransform getMaskTransform(int ROIIndex,
                               int shapeIndex)

getMaskVisible

Boolean getMaskVisible(int ROIIndex,
                     int shapeIndex)

getMaskHeight

Double getMaskHeight(int ROIIndex,
                   int shapeIndex)

getMaskWidth

Double getMaskWidth(int ROIIndex,
                  int shapeIndex)

getMaskX

Double getMaskX(int ROIIndex,
              int shapeIndex)

getMaskY

Double getMaskY(int ROIIndex,
              int shapeIndex)

getMicrobeamManipulationDescription

String getMicrobeamManipulationDescription(int experimentIndex,
                                         int microbeamManipulationIndex)

getMicrobeamManipulationExperimenterRef

String getMicrobeamManipulationExperimenterRef(int experimentIndex,
                                             int microbeamManipulationIndex)

getMicrobeamManipulationID

String getMicrobeamManipulationID(int experimentIndex,
                                int microbeamManipulationIndex)

getMicrobeamManipulationROIRef

String getMicrobeamManipulationROIRef(int experimentIndex,
                                    int microbeamManipulationIndex,
                                    int ROIRefIndex)

getMicrobeamManipulationType

MicrobeamManipulationType getMicrobeamManipulationType(int experimentIndex,
                                                     int microbeamManipulationIndex)

getMicroscopeLotNumber

String getMicroscopeLotNumber(int instrumentIndex)

getMicroscopeManufacturer

String getMicroscopeManufacturer(int instrumentIndex)

getMicroscopeModel

String getMicroscopeModel(int instrumentIndex)

getMicroscopeSerialNumber

String getMicroscopeSerialNumber(int instrumentIndex)

getMicroscopeType

MicroscopeType getMicroscopeType(int instrumentIndex)

getObjectiveCalibratedMagnification

Double getObjectiveCalibratedMagnification(int instrumentIndex,
                                         int objectiveIndex)

getObjectiveCorrection

Correction getObjectiveCorrection(int instrumentIndex,
                                int objectiveIndex)

getObjectiveID

String getObjectiveID(int instrumentIndex,
                    int objectiveIndex)

getObjectiveImmersion

Immersion getObjectiveImmersion(int instrumentIndex,
                              int objectiveIndex)

getObjectiveIris

Boolean getObjectiveIris(int instrumentIndex,
                       int objectiveIndex)

getObjectiveLensNA

Double getObjectiveLensNA(int instrumentIndex,
                        int objectiveIndex)

getObjectiveLotNumber

String getObjectiveLotNumber(int instrumentIndex,
                           int objectiveIndex)

getObjectiveManufacturer

String getObjectiveManufacturer(int instrumentIndex,
                              int objectiveIndex)

getObjectiveModel

String getObjectiveModel(int instrumentIndex,
                       int objectiveIndex)

getObjectiveNominalMagnification

PositiveInteger getObjectiveNominalMagnification(int instrumentIndex,
                                               int objectiveIndex)

getObjectiveSerialNumber

String getObjectiveSerialNumber(int instrumentIndex,
                              int objectiveIndex)

getObjectiveWorkingDistance

Double getObjectiveWorkingDistance(int instrumentIndex,
                                 int objectiveIndex)

getObjectiveSettingsCorrectionCollar

Double getObjectiveSettingsCorrectionCollar(int imageIndex)

getObjectiveSettingsID

String getObjectiveSettingsID(int imageIndex)

getObjectiveSettingsMedium

Medium getObjectiveSettingsMedium(int imageIndex)

getObjectiveSettingsRefractiveIndex

Double getObjectiveSettingsRefractiveIndex(int imageIndex)

getPixelsAnnotationRef

String getPixelsAnnotationRef(int imageIndex,
                            int annotationRefIndex)

getPixelsDimensionOrder

DimensionOrder getPixelsDimensionOrder(int imageIndex)

getPixelsID
```
String getPixelsID(int imageIndex)
```

getPixelsPhysicalSizeX

PositiveFloat getPixelsPhysicalSizeX(int imageIndex)

getPixelsPhysicalSizeY

PositiveFloat getPixelsPhysicalSizeY(int imageIndex)

getPixelsPhysicalSizeZ

PositiveFloat getPixelsPhysicalSizeZ(int imageIndex)

getPixelsSizeC

PositiveInteger getPixelsSizeC(int imageIndex)

getPixelsSizeT

PositiveInteger getPixelsSizeT(int imageIndex)

getPixelsSizeX

PositiveInteger getPixelsSizeX(int imageIndex)

getPixelsSizeY

PositiveInteger getPixelsSizeY(int imageIndex)

getPixelsSizeZ

PositiveInteger getPixelsSizeZ(int imageIndex)

getPixelsTimeIncrement

Double getPixelsTimeIncrement(int imageIndex)

getPixelsType

PixelType getPixelsType(int imageIndex)

getPlaneAnnotationRef

String getPlaneAnnotationRef(int imageIndex,
                           int planeIndex,
                           int annotationRefIndex)

getPlaneDeltaT

Double getPlaneDeltaT(int imageIndex,
                    int planeIndex)

getPlaneExposureTime

Double getPlaneExposureTime(int imageIndex,
                          int planeIndex)

getPlaneHashSHA1

String getPlaneHashSHA1(int imageIndex,
                      int planeIndex)

getPlanePositionX

Double getPlanePositionX(int imageIndex,
                       int planeIndex)

getPlanePositionY

Double getPlanePositionY(int imageIndex,
                       int planeIndex)

getPlanePositionZ

Double getPlanePositionZ(int imageIndex,
                       int planeIndex)

getPlaneTheC

NonNegativeInteger getPlaneTheC(int imageIndex,
                              int planeIndex)

getPlaneTheT

NonNegativeInteger getPlaneTheT(int imageIndex,
                              int planeIndex)

getPlaneTheZ

NonNegativeInteger getPlaneTheZ(int imageIndex,
                              int planeIndex)

getPlateAnnotationRef

String getPlateAnnotationRef(int plateIndex,
                           int annotationRefIndex)

getPlateColumnNamingConvention

NamingConvention getPlateColumnNamingConvention(int plateIndex)

getPlateColumns

PositiveInteger getPlateColumns(int plateIndex)

getPlateDescription

String getPlateDescription(int plateIndex)

getPlateExternalIdentifier

String getPlateExternalIdentifier(int plateIndex)

getPlateFieldIndex

NonNegativeInteger getPlateFieldIndex(int plateIndex)

getPlateID
```
String getPlateID(int plateIndex)
```

getPlateName
```
String getPlateName(int plateIndex)
```

getPlateRowNamingConvention

NamingConvention getPlateRowNamingConvention(int plateIndex)

getPlateRows

PositiveInteger getPlateRows(int plateIndex)

getPlateStatus
```
String getPlateStatus(int plateIndex)
```

getPlateWellOriginX

Double getPlateWellOriginX(int plateIndex)

getPlateWellOriginY

Double getPlateWellOriginY(int plateIndex)

getPlateAcquisitionAnnotationRef

String getPlateAcquisitionAnnotationRef(int plateIndex,
                                      int plateAcquisitionIndex,
                                      int annotationRefIndex)

getPlateAcquisitionDescription

String getPlateAcquisitionDescription(int plateIndex,
                                    int plateAcquisitionIndex)

getPlateAcquisitionEndTime

Timestamp getPlateAcquisitionEndTime(int plateIndex,
                                   int plateAcquisitionIndex)

getPlateAcquisitionID

String getPlateAcquisitionID(int plateIndex,
                           int plateAcquisitionIndex)

getPlateAcquisitionMaximumFieldCount

PositiveInteger getPlateAcquisitionMaximumFieldCount(int plateIndex,
                                                   int plateAcquisitionIndex)

getPlateAcquisitionName

String getPlateAcquisitionName(int plateIndex,
                             int plateAcquisitionIndex)

getPlateAcquisitionStartTime

Timestamp getPlateAcquisitionStartTime(int plateIndex,
                                     int plateAcquisitionIndex)

getPlateAcquisitionWellSampleRef

String getPlateAcquisitionWellSampleRef(int plateIndex,
                                      int plateAcquisitionIndex,
                                      int wellSampleRefIndex)

getPointFillColor

Color getPointFillColor(int ROIIndex,
                      int shapeIndex)

getPointFillRule

FillRule getPointFillRule(int ROIIndex,
                        int shapeIndex)

getPointFontFamily

FontFamily getPointFontFamily(int ROIIndex,
                            int shapeIndex)

getPointFontSize

NonNegativeInteger getPointFontSize(int ROIIndex,
                                  int shapeIndex)

getPointFontStyle

FontStyle getPointFontStyle(int ROIIndex,
                          int shapeIndex)

getPointID

String getPointID(int ROIIndex,
                int shapeIndex)

getPointLineCap

LineCap getPointLineCap(int ROIIndex,
                      int shapeIndex)

getPointLocked

Boolean getPointLocked(int ROIIndex,
                     int shapeIndex)

getPointStrokeColor

Color getPointStrokeColor(int ROIIndex,
                        int shapeIndex)

getPointStrokeDashArray

String getPointStrokeDashArray(int ROIIndex,
                             int shapeIndex)

getPointStrokeWidth

Double getPointStrokeWidth(int ROIIndex,
                         int shapeIndex)

getPointText

String getPointText(int ROIIndex,
                  int shapeIndex)

getPointTheC

NonNegativeInteger getPointTheC(int ROIIndex,
                              int shapeIndex)

getPointTheT

NonNegativeInteger getPointTheT(int ROIIndex,
                              int shapeIndex)

getPointTheZ

NonNegativeInteger getPointTheZ(int ROIIndex,
                              int shapeIndex)

getPointTransform

AffineTransform getPointTransform(int ROIIndex,
                                int shapeIndex)

getPointVisible

Boolean getPointVisible(int ROIIndex,
                      int shapeIndex)

getPointX

Double getPointX(int ROIIndex,
               int shapeIndex)

getPointY

Double getPointY(int ROIIndex,
               int shapeIndex)

getPolygonFillColor

Color getPolygonFillColor(int ROIIndex,
                        int shapeIndex)

getPolygonFillRule

FillRule getPolygonFillRule(int ROIIndex,
                          int shapeIndex)

getPolygonFontFamily

FontFamily getPolygonFontFamily(int ROIIndex,
                              int shapeIndex)

getPolygonFontSize

NonNegativeInteger getPolygonFontSize(int ROIIndex,
                                    int shapeIndex)

getPolygonFontStyle

FontStyle getPolygonFontStyle(int ROIIndex,
                            int shapeIndex)

getPolygonID

String getPolygonID(int ROIIndex,
                  int shapeIndex)

getPolygonLineCap

LineCap getPolygonLineCap(int ROIIndex,
                        int shapeIndex)

getPolygonLocked

Boolean getPolygonLocked(int ROIIndex,
                       int shapeIndex)

getPolygonStrokeColor

Color getPolygonStrokeColor(int ROIIndex,
                          int shapeIndex)

getPolygonStrokeDashArray

String getPolygonStrokeDashArray(int ROIIndex,
                               int shapeIndex)

getPolygonStrokeWidth

Double getPolygonStrokeWidth(int ROIIndex,
                           int shapeIndex)

getPolygonText

String getPolygonText(int ROIIndex,
                    int shapeIndex)

getPolygonTheC

NonNegativeInteger getPolygonTheC(int ROIIndex,
                                int shapeIndex)

getPolygonTheT

NonNegativeInteger getPolygonTheT(int ROIIndex,
                                int shapeIndex)

getPolygonTheZ

NonNegativeInteger getPolygonTheZ(int ROIIndex,
                                int shapeIndex)

getPolygonTransform

AffineTransform getPolygonTransform(int ROIIndex,
                                  int shapeIndex)

getPolygonVisible

Boolean getPolygonVisible(int ROIIndex,
                        int shapeIndex)

getPolygonPoints

String getPolygonPoints(int ROIIndex,
                      int shapeIndex)

getPolylineFillColor

Color getPolylineFillColor(int ROIIndex,
                         int shapeIndex)

getPolylineFillRule

FillRule getPolylineFillRule(int ROIIndex,
                           int shapeIndex)

getPolylineFontFamily

FontFamily getPolylineFontFamily(int ROIIndex,
                               int shapeIndex)

getPolylineFontSize

NonNegativeInteger getPolylineFontSize(int ROIIndex,
                                     int shapeIndex)

getPolylineFontStyle

FontStyle getPolylineFontStyle(int ROIIndex,
                             int shapeIndex)

getPolylineID

String getPolylineID(int ROIIndex,
                   int shapeIndex)

getPolylineLineCap

LineCap getPolylineLineCap(int ROIIndex,
                         int shapeIndex)

getPolylineLocked

Boolean getPolylineLocked(int ROIIndex,
                        int shapeIndex)

getPolylineStrokeColor

Color getPolylineStrokeColor(int ROIIndex,
                           int shapeIndex)

getPolylineStrokeDashArray

String getPolylineStrokeDashArray(int ROIIndex,
                                int shapeIndex)

getPolylineStrokeWidth

Double getPolylineStrokeWidth(int ROIIndex,
                            int shapeIndex)

getPolylineText

String getPolylineText(int ROIIndex,
                     int shapeIndex)

getPolylineTheC

NonNegativeInteger getPolylineTheC(int ROIIndex,
                                 int shapeIndex)

getPolylineTheT

NonNegativeInteger getPolylineTheT(int ROIIndex,
                                 int shapeIndex)

getPolylineTheZ

NonNegativeInteger getPolylineTheZ(int ROIIndex,
                                 int shapeIndex)

getPolylineTransform

AffineTransform getPolylineTransform(int ROIIndex,
                                   int shapeIndex)

getPolylineVisible

Boolean getPolylineVisible(int ROIIndex,
                         int shapeIndex)

getPolylineMarkerEnd

Marker getPolylineMarkerEnd(int ROIIndex,
                          int shapeIndex)

getPolylineMarkerStart

Marker getPolylineMarkerStart(int ROIIndex,
                            int shapeIndex)

getPolylinePoints

String getPolylinePoints(int ROIIndex,
                       int shapeIndex)

getProjectAnnotationRef

String getProjectAnnotationRef(int projectIndex,
                             int annotationRefIndex)

getProjectDatasetRef

String getProjectDatasetRef(int projectIndex,
                          int datasetRefIndex)

getProjectDescription

String getProjectDescription(int projectIndex)

getProjectExperimenterGroupRef

String getProjectExperimenterGroupRef(int projectIndex)

getProjectExperimenterRef

String getProjectExperimenterRef(int projectIndex)

getProjectID
```
String getProjectID(int projectIndex)
```

getProjectName

String getProjectName(int projectIndex)

getROIAnnotationRef

String getROIAnnotationRef(int ROIIndex,
                         int annotationRefIndex)

getROIDescription

String getROIDescription(int ROIIndex)

getROIID
```
String getROIID(int ROIIndex)
```

getROIName
```
String getROIName(int ROIIndex)
```

getROINamespace
```
String getROINamespace(int ROIIndex)
```

getReagentAnnotationRef

String getReagentAnnotationRef(int screenIndex,
                             int reagentIndex,
                             int annotationRefIndex)

getReagentDescription

String getReagentDescription(int screenIndex,
                           int reagentIndex)

getReagentID

String getReagentID(int screenIndex,
                  int reagentIndex)

getReagentName

String getReagentName(int screenIndex,
                    int reagentIndex)

getReagentReagentIdentifier

String getReagentReagentIdentifier(int screenIndex,
                                 int reagentIndex)

getRectangleFillColor

Color getRectangleFillColor(int ROIIndex,
                          int shapeIndex)

getRectangleFillRule

FillRule getRectangleFillRule(int ROIIndex,
                            int shapeIndex)

getRectangleFontFamily

FontFamily getRectangleFontFamily(int ROIIndex,
                                int shapeIndex)

getRectangleFontSize

NonNegativeInteger getRectangleFontSize(int ROIIndex,
                                      int shapeIndex)

getRectangleFontStyle

FontStyle getRectangleFontStyle(int ROIIndex,
                              int shapeIndex)

getRectangleID

String getRectangleID(int ROIIndex,
                    int shapeIndex)

getRectangleLineCap

LineCap getRectangleLineCap(int ROIIndex,
                          int shapeIndex)

getRectangleLocked

Boolean getRectangleLocked(int ROIIndex,
                         int shapeIndex)

getRectangleStrokeColor

Color getRectangleStrokeColor(int ROIIndex,
                            int shapeIndex)

getRectangleStrokeDashArray

String getRectangleStrokeDashArray(int ROIIndex,
                                 int shapeIndex)

getRectangleStrokeWidth

Double getRectangleStrokeWidth(int ROIIndex,
                             int shapeIndex)

getRectangleText

String getRectangleText(int ROIIndex,
                      int shapeIndex)

getRectangleTheC

NonNegativeInteger getRectangleTheC(int ROIIndex,
                                  int shapeIndex)

getRectangleTheT

NonNegativeInteger getRectangleTheT(int ROIIndex,
                                  int shapeIndex)

getRectangleTheZ

NonNegativeInteger getRectangleTheZ(int ROIIndex,
                                  int shapeIndex)

getRectangleTransform

AffineTransform getRectangleTransform(int ROIIndex,
                                    int shapeIndex)

getRectangleVisible

Boolean getRectangleVisible(int ROIIndex,
                          int shapeIndex)

getRectangleHeight

Double getRectangleHeight(int ROIIndex,
                        int shapeIndex)

getRectangleWidth

Double getRectangleWidth(int ROIIndex,
                       int shapeIndex)

getRectangleX

Double getRectangleX(int ROIIndex,
                   int shapeIndex)

getRectangleY

Double getRectangleY(int ROIIndex,
                   int shapeIndex)

getScreenAnnotationRef

String getScreenAnnotationRef(int screenIndex,
                            int annotationRefIndex)

getScreenDescription

String getScreenDescription(int screenIndex)

getScreenID
```
String getScreenID(int screenIndex)
```

getScreenName
```
String getScreenName(int screenIndex)
```

getScreenPlateRef

String getScreenPlateRef(int screenIndex,
                       int plateRefIndex)

getScreenProtocolDescription

String getScreenProtocolDescription(int screenIndex)

getScreenProtocolIdentifier

String getScreenProtocolIdentifier(int screenIndex)

getScreenReagentSetDescription

String getScreenReagentSetDescription(int screenIndex)

getScreenReagentSetIdentifier

String getScreenReagentSetIdentifier(int screenIndex)

getScreenType
```
String getScreenType(int screenIndex)
```

getStageLabelName

String getStageLabelName(int imageIndex)

getStageLabelX
```
Double getStageLabelX(int imageIndex)
```

getStageLabelY
```
Double getStageLabelY(int imageIndex)
```

getStageLabelZ
```
Double getStageLabelZ(int imageIndex)
```

getTagAnnotationAnnotationRef

String getTagAnnotationAnnotationRef(int tagAnnotationIndex,
                                   int annotationRefIndex)

getTagAnnotationDescription

String getTagAnnotationDescription(int tagAnnotationIndex)

getTagAnnotationID

String getTagAnnotationID(int tagAnnotationIndex)

getTagAnnotationNamespace

String getTagAnnotationNamespace(int tagAnnotationIndex)

getTagAnnotationValue

String getTagAnnotationValue(int tagAnnotationIndex)

getTermAnnotationAnnotationRef

String getTermAnnotationAnnotationRef(int termAnnotationIndex,
                                    int annotationRefIndex)

getTermAnnotationDescription

String getTermAnnotationDescription(int termAnnotationIndex)

getTermAnnotationID

String getTermAnnotationID(int termAnnotationIndex)

getTermAnnotationNamespace

String getTermAnnotationNamespace(int termAnnotationIndex)

getTermAnnotationValue

String getTermAnnotationValue(int termAnnotationIndex)

getTiffDataFirstC

NonNegativeInteger getTiffDataFirstC(int imageIndex,
                                   int tiffDataIndex)

getTiffDataFirstT

NonNegativeInteger getTiffDataFirstT(int imageIndex,
                                   int tiffDataIndex)

getTiffDataFirstZ

NonNegativeInteger getTiffDataFirstZ(int imageIndex,
                                   int tiffDataIndex)

getTiffDataIFD

NonNegativeInteger getTiffDataIFD(int imageIndex,
                                int tiffDataIndex)

getTiffDataPlaneCount

NonNegativeInteger getTiffDataPlaneCount(int imageIndex,
                                       int tiffDataIndex)

getTimestampAnnotationAnnotationRef

String getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex,
                                         int annotationRefIndex)

getTimestampAnnotationDescription

String getTimestampAnnotationDescription(int timestampAnnotationIndex)

getTimestampAnnotationID

String getTimestampAnnotationID(int timestampAnnotationIndex)

getTimestampAnnotationNamespace

String getTimestampAnnotationNamespace(int timestampAnnotationIndex)

getTimestampAnnotationValue

Timestamp getTimestampAnnotationValue(int timestampAnnotationIndex)

getTransmittanceRangeCutIn

PositiveInteger getTransmittanceRangeCutIn(int instrumentIndex,
                                         int filterIndex)

getTransmittanceRangeCutInTolerance

NonNegativeInteger getTransmittanceRangeCutInTolerance(int instrumentIndex,
                                                     int filterIndex)

getTransmittanceRangeCutOut

PositiveInteger getTransmittanceRangeCutOut(int instrumentIndex,
                                          int filterIndex)

getTransmittanceRangeCutOutTolerance

NonNegativeInteger getTransmittanceRangeCutOutTolerance(int instrumentIndex,
                                                      int filterIndex)

getTransmittanceRangeTransmittance

PercentFraction getTransmittanceRangeTransmittance(int instrumentIndex,
                                                 int filterIndex)

getUUIDFileName

String getUUIDFileName(int imageIndex,
                     int tiffDataIndex)

getWellAnnotationRef

String getWellAnnotationRef(int plateIndex,
                          int wellIndex,
                          int annotationRefIndex)

getWellColor

Color getWellColor(int plateIndex,
                 int wellIndex)

getWellColumn

NonNegativeInteger getWellColumn(int plateIndex,
                               int wellIndex)

getWellExternalDescription

String getWellExternalDescription(int plateIndex,
                                int wellIndex)

getWellExternalIdentifier

String getWellExternalIdentifier(int plateIndex,
                               int wellIndex)

getWellID

String getWellID(int plateIndex,
               int wellIndex)

getWellReagentRef

String getWellReagentRef(int plateIndex,
                       int wellIndex)

getWellRow

NonNegativeInteger getWellRow(int plateIndex,
                            int wellIndex)

getWellType

String getWellType(int plateIndex,
                 int wellIndex)

getWellSampleAnnotationRef

String getWellSampleAnnotationRef(int plateIndex,
                                int wellIndex,
                                int wellSampleIndex,
                                int annotationRefIndex)

getWellSampleID

String getWellSampleID(int plateIndex,
                     int wellIndex,
                     int wellSampleIndex)

getWellSampleImageRef

String getWellSampleImageRef(int plateIndex,
                           int wellIndex,
                           int wellSampleIndex)

getWellSampleIndex

NonNegativeInteger getWellSampleIndex(int plateIndex,
                                    int wellIndex,
                                    int wellSampleIndex)

getWellSamplePositionX

Double getWellSamplePositionX(int plateIndex,
                            int wellIndex,
                            int wellSampleIndex)

getWellSamplePositionY

Double getWellSamplePositionY(int plateIndex,
                            int wellIndex,
                            int wellSampleIndex)

getWellSampleTimepoint

Timestamp getWellSampleTimepoint(int plateIndex,
                               int wellIndex,
                               int wellSampleIndex)

getXMLAnnotationAnnotationRef

String getXMLAnnotationAnnotationRef(int XMLAnnotationIndex,
                                   int annotationRefIndex)

getXMLAnnotationDescription

String getXMLAnnotationDescription(int XMLAnnotationIndex)

getXMLAnnotationID

String getXMLAnnotationID(int XMLAnnotationIndex)

getXMLAnnotationNamespace

String getXMLAnnotationNamespace(int XMLAnnotationIndex)

getXMLAnnotationValue

String getXMLAnnotationValue(int XMLAnnotationIndex)

Interface MetadataRetrieve

Method Summary

Method Detail

getPixelsBinDataCount

getBooleanAnnotationAnnotationCount

getCommentAnnotationAnnotationCount

getDoubleAnnotationAnnotationCount

getFileAnnotationAnnotationCount

getListAnnotationAnnotationCount

getLongAnnotationAnnotationCount

getTagAnnotationAnnotationCount

getTermAnnotationAnnotationCount

getTimestampAnnotationAnnotationCount

getXMLAnnotationAnnotationCount

getLightSourceType

getShapeType

getROIAnnotationRefCount

getPlateAcquisitionAnnotationRefCount

getPlateAnnotationRefCount

getExperimenterGroupAnnotationRefCount

getImageAnnotationRefCount

getScreenAnnotationRefCount

getWellAnnotationRefCount

getDatasetAnnotationRefCount

getProjectAnnotationRefCount

getReagentAnnotationRefCount

getPlaneAnnotationRefCount

getExperimenterAnnotationRefCount

getWellSampleAnnotationRefCount

getPixelsAnnotationRefCount

getChannelAnnotationRefCount

getBooleanAnnotationCount

getChannelCount

getCommentAnnotationCount

getDatasetCount

getDatasetRefCount

getDetectorCount

getDichroicCount

getDoubleAnnotationCount

getLightPathEmissionFilterRefCount

getFilterSetEmissionFilterRefCount

getLightPathExcitationFilterRefCount

getFilterSetExcitationFilterRefCount

getExperimentCount

getExperimenterCount

getExperimenterGroupCount

getExperimenterGroupExperimenterRefCount

getFileAnnotationCount

getFilterCount

getFilterSetCount

getImageCount

getDatasetImageRefCount

getInstrumentCount

getLeaderCount

getLightSourceCount

getMicrobeamManipulationLightSourceSettingsCount

getListAnnotationCount

getLongAnnotationCount

getMicrobeamManipulationCount

getMicrobeamManipulationRefCount

getObjectiveCount

getPlaneCount

getPlateCount

getPlateAcquisitionCount

getPlateRefCount

getProjectCount

getROICount

getImageROIRefCount

getMicrobeamManipulationROIRefCount

getReagentCount

getScreenCount

getShapeCount

getTagAnnotationCount

getTermAnnotationCount

getTiffDataCount

getTimestampAnnotationCount

getUUIDValue

getWellCount

getWellSampleCount

getWellSampleRefCount