bioformats
5.1.8
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OME-XML metadata root node. More...
#include <ome/xml/meta/OMEXMLMetadataRoot.h>
Public Member Functions | |
OMEXMLMetadataRoot () | |
Constructor. | |
OMEXMLMetadataRoot (const OMEXMLMetadataRoot ©) | |
Copy constructor. | |
OMEXMLMetadataRoot (const xml::model::OME ©) | |
Copy constructor. | |
virtual | ~OMEXMLMetadataRoot () |
Destructor. | |
Public Member Functions inherited from ome::xml::model::OME | |
OME () | |
Default constructor. | |
OME (const OME ©) | |
Copy constructor. More... | |
virtual | ~OME () |
Destructor. | |
const std::string & | elementName () const |
Get the element name of this model object. More... | |
bool | validElementName (const std::string &name) const |
Check if a given element name is valid for processing by this model object. More... | |
virtual void | update (const common::xml::dom::Element &element, ome::xml::model::OMEModel &model) |
Update the object hierarchy recursively from an XML DOM tree. More... | |
bool | link (ome::compat::shared_ptr< Reference > &reference, ome::compat::shared_ptr< ome::xml::model::OMEModelObject > &object) |
Link a given OME model object to this model object. More... | |
ome::compat::shared_ptr< std::string > | getUUID () |
Get the UUID property. More... | |
const ome::compat::shared_ptr< std::string > | getUUID () const |
Get the UUID property. More... | |
void | setUUID (ome::compat::shared_ptr< std::string > &uuid) |
Set the UUID property. More... | |
ome::compat::shared_ptr< std::string > | getCreator () |
Get the Creator property. More... | |
const ome::compat::shared_ptr< std::string > | getCreator () const |
Get the Creator property. More... | |
void | setCreator (ome::compat::shared_ptr< std::string > &creator) |
Set the Creator property. More... | |
ome::compat::shared_ptr< ome::xml::model::Rights > | getRights () |
Get the Rights property. More... | |
const ome::compat::shared_ptr< ome::xml::model::Rights > | getRights () const |
Get the Rights property. More... | |
void | setRights (ome::compat::shared_ptr< ome::xml::model::Rights > &rights) |
Set the Rights property. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Project > >::size_type | sizeOfProjectList () const |
Get size of linked Project list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Project > > & | getProjectList () |
Get the Project list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Project > > & | getProjectList () const |
Get the Project list. More... | |
ome::compat::shared_ptr< ome::xml::model::Project > & | getProject (std::vector< ome::compat::shared_ptr< ome::xml::model::Project > >::size_type index) |
Get Project. More... | |
const ome::compat::shared_ptr< ome::xml::model::Project > & | getProject (std::vector< ome::compat::shared_ptr< ome::xml::model::Project > >::size_type index) const |
Get Project. More... | |
void | setProject (std::vector< ome::compat::shared_ptr< ome::xml::model::Project > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Project > &project) |
Set Project. More... | |
void | addProject (ome::compat::shared_ptr< ome::xml::model::Project > &project) |
Add Project. More... | |
void | removeProject (ome::compat::shared_ptr< ome::xml::model::Project > &project) |
Remove Project. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Dataset > >::size_type | sizeOfDatasetList () const |
Get size of linked Dataset list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Dataset > > & | getDatasetList () |
Get the Dataset list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Dataset > > & | getDatasetList () const |
Get the Dataset list. More... | |
ome::compat::shared_ptr< ome::xml::model::Dataset > & | getDataset (std::vector< ome::compat::shared_ptr< ome::xml::model::Dataset > >::size_type index) |
Get Dataset. More... | |
const ome::compat::shared_ptr< ome::xml::model::Dataset > & | getDataset (std::vector< ome::compat::shared_ptr< ome::xml::model::Dataset > >::size_type index) const |
Get Dataset. More... | |
void | setDataset (std::vector< ome::compat::shared_ptr< ome::xml::model::Dataset > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Dataset > &dataset) |
Set Dataset. More... | |
void | addDataset (ome::compat::shared_ptr< ome::xml::model::Dataset > &dataset) |
Add Dataset. More... | |
void | removeDataset (ome::compat::shared_ptr< ome::xml::model::Dataset > &dataset) |
Remove Dataset. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Experiment > >::size_type | sizeOfExperimentList () const |
Get size of linked Experiment list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Experiment > > & | getExperimentList () |
Get the Experiment list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Experiment > > & | getExperimentList () const |
Get the Experiment list. More... | |
ome::compat::shared_ptr< ome::xml::model::Experiment > & | getExperiment (std::vector< ome::compat::shared_ptr< ome::xml::model::Experiment > >::size_type index) |
Get Experiment. More... | |
const ome::compat::shared_ptr< ome::xml::model::Experiment > & | getExperiment (std::vector< ome::compat::shared_ptr< ome::xml::model::Experiment > >::size_type index) const |
Get Experiment. More... | |
void | setExperiment (std::vector< ome::compat::shared_ptr< ome::xml::model::Experiment > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Experiment > &experiment) |
Set Experiment. More... | |
void | addExperiment (ome::compat::shared_ptr< ome::xml::model::Experiment > &experiment) |
Add Experiment. More... | |
void | removeExperiment (ome::compat::shared_ptr< ome::xml::model::Experiment > &experiment) |
Remove Experiment. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Plate > >::size_type | sizeOfPlateList () const |
Get size of linked Plate list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Plate > > & | getPlateList () |
Get the Plate list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Plate > > & | getPlateList () const |
Get the Plate list. More... | |
ome::compat::shared_ptr< ome::xml::model::Plate > & | getPlate (std::vector< ome::compat::shared_ptr< ome::xml::model::Plate > >::size_type index) |
Get Plate. More... | |
const ome::compat::shared_ptr< ome::xml::model::Plate > & | getPlate (std::vector< ome::compat::shared_ptr< ome::xml::model::Plate > >::size_type index) const |
Get Plate. More... | |
void | setPlate (std::vector< ome::compat::shared_ptr< ome::xml::model::Plate > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Plate > &plate) |
Set Plate. More... | |
void | addPlate (ome::compat::shared_ptr< ome::xml::model::Plate > &plate) |
Add Plate. More... | |
void | removePlate (ome::compat::shared_ptr< ome::xml::model::Plate > &plate) |
Remove Plate. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Screen > >::size_type | sizeOfScreenList () const |
Get size of linked Screen list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Screen > > & | getScreenList () |
Get the Screen list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Screen > > & | getScreenList () const |
Get the Screen list. More... | |
ome::compat::shared_ptr< ome::xml::model::Screen > & | getScreen (std::vector< ome::compat::shared_ptr< ome::xml::model::Screen > >::size_type index) |
Get Screen. More... | |
const ome::compat::shared_ptr< ome::xml::model::Screen > & | getScreen (std::vector< ome::compat::shared_ptr< ome::xml::model::Screen > >::size_type index) const |
Get Screen. More... | |
void | setScreen (std::vector< ome::compat::shared_ptr< ome::xml::model::Screen > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Screen > &screen) |
Set Screen. More... | |
void | addScreen (ome::compat::shared_ptr< ome::xml::model::Screen > &screen) |
Add Screen. More... | |
void | removeScreen (ome::compat::shared_ptr< ome::xml::model::Screen > &screen) |
Remove Screen. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Experimenter > >::size_type | sizeOfExperimenterList () const |
Get size of linked Experimenter list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Experimenter > > & | getExperimenterList () |
Get the Experimenter list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Experimenter > > & | getExperimenterList () const |
Get the Experimenter list. More... | |
ome::compat::shared_ptr< ome::xml::model::Experimenter > & | getExperimenter (std::vector< ome::compat::shared_ptr< ome::xml::model::Experimenter > >::size_type index) |
Get Experimenter. More... | |
const ome::compat::shared_ptr< ome::xml::model::Experimenter > & | getExperimenter (std::vector< ome::compat::shared_ptr< ome::xml::model::Experimenter > >::size_type index) const |
Get Experimenter. More... | |
void | setExperimenter (std::vector< ome::compat::shared_ptr< ome::xml::model::Experimenter > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter) |
Set Experimenter. More... | |
void | addExperimenter (ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter) |
Add Experimenter. More... | |
void | removeExperimenter (ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter) |
Remove Experimenter. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > >::size_type | sizeOfExperimenterGroupList () const |
Get size of linked ExperimenterGroup list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > > & | getExperimenterGroupList () |
Get the ExperimenterGroup list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > > & | getExperimenterGroupList () const |
Get the ExperimenterGroup list. More... | |
ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > & | getExperimenterGroup (std::vector< ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > >::size_type index) |
Get ExperimenterGroup. More... | |
const ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > & | getExperimenterGroup (std::vector< ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > >::size_type index) const |
Get ExperimenterGroup. More... | |
void | setExperimenterGroup (std::vector< ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > >::size_type index, ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup) |
Set ExperimenterGroup. More... | |
void | addExperimenterGroup (ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup) |
Add ExperimenterGroup. More... | |
void | removeExperimenterGroup (ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup) |
Remove ExperimenterGroup. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Instrument > >::size_type | sizeOfInstrumentList () const |
Get size of linked Instrument list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Instrument > > & | getInstrumentList () |
Get the Instrument list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Instrument > > & | getInstrumentList () const |
Get the Instrument list. More... | |
ome::compat::shared_ptr< ome::xml::model::Instrument > & | getInstrument (std::vector< ome::compat::shared_ptr< ome::xml::model::Instrument > >::size_type index) |
Get Instrument. More... | |
const ome::compat::shared_ptr< ome::xml::model::Instrument > & | getInstrument (std::vector< ome::compat::shared_ptr< ome::xml::model::Instrument > >::size_type index) const |
Get Instrument. More... | |
void | setInstrument (std::vector< ome::compat::shared_ptr< ome::xml::model::Instrument > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Instrument > &instrument) |
Set Instrument. More... | |
void | addInstrument (ome::compat::shared_ptr< ome::xml::model::Instrument > &instrument) |
Add Instrument. More... | |
void | removeInstrument (ome::compat::shared_ptr< ome::xml::model::Instrument > &instrument) |
Remove Instrument. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Image > >::size_type | sizeOfImageList () const |
Get size of linked Image list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::Image > > & | getImageList () |
Get the Image list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::Image > > & | getImageList () const |
Get the Image list. More... | |
ome::compat::shared_ptr< ome::xml::model::Image > & | getImage (std::vector< ome::compat::shared_ptr< ome::xml::model::Image > >::size_type index) |
Get Image. More... | |
const ome::compat::shared_ptr< ome::xml::model::Image > & | getImage (std::vector< ome::compat::shared_ptr< ome::xml::model::Image > >::size_type index) const |
Get Image. More... | |
void | setImage (std::vector< ome::compat::shared_ptr< ome::xml::model::Image > >::size_type index, ome::compat::shared_ptr< ome::xml::model::Image > &image) |
Set Image. More... | |
void | addImage (ome::compat::shared_ptr< ome::xml::model::Image > &image) |
Add Image. More... | |
void | removeImage (ome::compat::shared_ptr< ome::xml::model::Image > &image) |
Remove Image. More... | |
ome::compat::shared_ptr< ome::xml::model::StructuredAnnotations > | getStructuredAnnotations () |
Get the StructuredAnnotations property. More... | |
const ome::compat::shared_ptr< ome::xml::model::StructuredAnnotations > | getStructuredAnnotations () const |
Get the StructuredAnnotations property. More... | |
void | setStructuredAnnotations (ome::compat::shared_ptr< ome::xml::model::StructuredAnnotations > &structuredAnnotations) |
Set the StructuredAnnotations property. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::ROI > >::size_type | sizeOfROIList () const |
Get size of linked ROI list. More... | |
std::vector< ome::compat::shared_ptr< ome::xml::model::ROI > > & | getROIList () |
Get the ROI list. More... | |
const std::vector< ome::compat::shared_ptr< ome::xml::model::ROI > > & | getROIList () const |
Get the ROI list. More... | |
ome::compat::shared_ptr< ome::xml::model::ROI > & | getROI (std::vector< ome::compat::shared_ptr< ome::xml::model::ROI > >::size_type index) |
Get ROI. More... | |
const ome::compat::shared_ptr< ome::xml::model::ROI > & | getROI (std::vector< ome::compat::shared_ptr< ome::xml::model::ROI > >::size_type index) const |
Get ROI. More... | |
void | setROI (std::vector< ome::compat::shared_ptr< ome::xml::model::ROI > >::size_type index, ome::compat::shared_ptr< ome::xml::model::ROI > &roi) |
Set ROI. More... | |
void | addROI (ome::compat::shared_ptr< ome::xml::model::ROI > &roi) |
Add ROI. More... | |
void | removeROI (ome::compat::shared_ptr< ome::xml::model::ROI > &roi) |
Remove ROI. More... | |
ome::compat::shared_ptr< ome::xml::model::BinaryOnly > | getBinaryOnly () |
Get the BinaryOnly property. More... | |
const ome::compat::shared_ptr< ome::xml::model::BinaryOnly > | getBinaryOnly () const |
Get the BinaryOnly property. More... | |
void | setBinaryOnly (ome::compat::shared_ptr< ome::xml::model::BinaryOnly > &binaryOnly) |
Set the BinaryOnly property. More... | |
virtual common::xml::dom::Element | asXMLElement (common::xml::dom::Document &document) const |
Transform the object hierarchy rooted at this element to XML. More... | |
const std::string & | getXMLNamespace () const |
Get the XML namespace for this model object. More... | |
Public Member Functions inherited from ome::xml::model::detail::OMEModelObject | |
virtual | ~OMEModelObject () |
Destructor. | |
virtual void | update (const common::xml::dom::Element &element,::ome::xml::model::OMEModel &model) |
Update the object hierarchy recursively from an XML DOM tree. More... | |
virtual bool | link (ome::compat::shared_ptr< Reference > &reference, ome::compat::shared_ptr< ::ome::xml::model::OMEModelObject > &object) |
Link a given OME model object to this model object. More... | |
Public Member Functions inherited from ome::xml::model::OMEModelObject | |
virtual bool | link (ome::compat::shared_ptr< Reference > &reference, ome::compat::shared_ptr< OMEModelObject > &object)=0 |
Link a given OME model object to this model object. More... | |
Public Member Functions inherited from ome::xml::meta::MetadataRoot | |
virtual | ~MetadataRoot () |
Destructor. | |
Private Member Functions | |
OMEXMLMetadataRoot & | operator= (const OMEXMLMetadataRoot &) |
Assignment operator (deleted). | |
Additional Inherited Members | |
Static Public Member Functions inherited from ome::xml::model::OME | |
static ome::compat::shared_ptr< OME > | create (const common::xml::dom::Element &element, ome::xml::model::OMEModel &model) |
Create a OME model object from DOM element. More... | |
Static Public Member Functions inherited from ome::xml::model::detail::OMEModelObject | |
static std::vector< common::xml::dom::Element > | getChildrenByTagName (const common::xml::dom::Element &parent, const std::string &name) |
Retrieve all the children of an element that have a given tag name. More... | |
static std::string | stripNamespacePrefix (const std::string &value) |
Strip the namespace prefix from a tag name. More... | |
Protected Member Functions inherited from ome::xml::model::OME | |
virtual common::xml::dom::Element | asXMLElementInternal (common::xml::dom::Document &document, common::xml::dom::Element &element) const |
Transform the object hierarchy rooted at this element to XML. More... | |
Protected Member Functions inherited from ome::xml::model::detail::OMEModelObject | |
OMEModelObject (const std::string &objectType="OMEModelObject") | |
Constructor. | |
OMEModelObject (const OMEModelObject ©) | |
Copy constructor. More... | |
template<class C , typename T > | |
bool | contains (const C &container, const ome::compat::shared_ptr< T > &element) |
Check if a container contains a particular element. More... | |
Protected Member Functions inherited from ome::xml::model::OMEModelObject | |
OMEModelObject () | |
Constructor. | |
Protected Member Functions inherited from ome::xml::meta::MetadataRoot | |
MetadataRoot () | |
Constructor. | |
Protected Attributes inherited from ome::xml::model::detail::OMEModelObject | |
ome::common::Logger | logger |
Message logger. | |
OME-XML metadata root node.