| Package | Description | 
|---|---|
| ome.api | Contains the central verbs of the Omero System. | 
| ome.model.annotations | |
| ome.model.containers | |
| ome.model.core | |
| ome.model.fs | |
| ome.model.roi | |
| ome.model.screen | |
| ome.services.delete | Implementations of the ome.api.IDelete service. | 
| ome.services.fulltext.bridges | Custom FieldBridge implementations which can be configured to be run on each
indexing activity. | 
| ome.tools | OMERO Server Utility and Spring/Hibernate Tools
        Classes/Interfaces that implement File, Hibernate, Spring, Annotation, Hierarchy, etc. method
        mechanics for the OMERO server
Related Documentation
For more information, please see:
  
        TODO
  
 | 
| Modifier and Type | Method and Description | 
|---|---|
| <T extends IObject> | IContainer. getImages(java.lang.Class<T> rootNodeType,
         java.util.Set<java.lang.Long> rootNodeIds,
         Parameters options)Retrieve a user's (or all users') images within any given container. | 
| java.util.Set<Image> | IContainer. getImagesByOptions(Parameters options)Retrieve images by options. | 
| java.util.Set<Image> | IAnalysis. getImagesForDataset(long datasetId) | 
| java.util.Set<Image> | IContainer. getUserImages(Parameters options)Retrieve a user's images. | 
| Modifier and Type | Method and Description | 
|---|---|
| Image | ImageAnnotationLink. parent() | 
| Modifier and Type | Method and Description | 
|---|---|
| void | ImageAnnotationLink. link(Image parent,
    Annotation child) | 
| Modifier and Type | Method and Description | 
|---|---|
| Image | DatasetImageLink. child() | 
| Image | FolderImageLink. child() | 
| Modifier and Type | Method and Description | 
|---|---|
| java.util.Iterator<Image> | Dataset. linkedImageIterator()provides an iterator over the parent values of the imageLinks. | 
| java.util.Iterator<Image> | Folder. linkedImageIterator()provides an iterator over the parent values of the imageLinks. | 
| java.util.List<Image> | Dataset. linkedImageList()produces a  List-copy of the underlying collection. | 
| java.util.List<Image> | Folder. linkedImageList()produces a  List-copy of the underlying collection. | 
| Modifier and Type | Method and Description | 
|---|---|
| java.util.Set<DatasetImageLink> | Dataset. findDatasetImageLink(Image target)find all ome.model.containers.DatasetImageLink which have the argument as their child. | 
| java.util.Set<FolderImageLink> | Folder. findFolderImageLink(Image target)find all ome.model.containers.FolderImageLink which have the argument as their child. | 
| void | DatasetImageLink. link(Dataset parent,
    Image child) | 
| void | FolderImageLink. link(Folder parent,
    Image child) | 
| DatasetImageLink | Dataset. linkImage(Image addition)Adds a ome.model.containers.DatasetImageLink to imageLinks . | 
| FolderImageLink | Folder. linkImage(Image addition)Adds a ome.model.containers.FolderImageLink to imageLinks . | 
| void | Dataset. unlinkImage(Image removal)unlinks all ome.model.core.Image instances from this instance. | 
| void | Folder. unlinkImage(Image removal)unlinks all ome.model.core.Image instances from this instance. | 
| Modifier and Type | Field and Description | 
|---|---|
| protected Image | Pixels. image | 
| Modifier and Type | Method and Description | 
|---|---|
| Image | Pixels. getImage()Many-to-one field ome.model.core.Pixels.image (ome.model.core.Image) | 
| Image | Image. newInstance() | 
| Image | Image. proxy() | 
| Modifier and Type | Method and Description | 
|---|---|
| void | Pixels. setImage(Image image) | 
| Constructor and Description | 
|---|
| Pixels(Image _image,
      PixelsType _pixelsType,
      java.lang.Integer _sizeX,
      java.lang.Integer _sizeY,
      java.lang.Integer _sizeZ,
      java.lang.Integer _sizeC,
      java.lang.Integer _sizeT,
      java.lang.String _sha1,
      DimensionOrder _dimensionOrder) | 
| Modifier and Type | Field and Description | 
|---|---|
| protected java.util.Set<Image> | Fileset. images | 
| Modifier and Type | Method and Description | 
|---|---|
| protected java.util.Set<Image> | Fileset. getImages()returns images . | 
| java.util.Iterator<Image> | Fileset. iterateImages()should be used rather than accessing the images set directly. | 
| java.util.Collection<Image> | Fileset. unmodifiableImages()Returns an unmodifiable collection-view | 
| Modifier and Type | Method and Description | 
|---|---|
| void | Fileset. addImage(Image target)use instead of setImages . | 
| void | Fileset. removeImage(Image target)removes a single element from this set and makes the inverse call on ome.model.core.Image | 
| Modifier and Type | Method and Description | 
|---|---|
| void | Fileset. addImageSet(java.util.Collection<Image> targets)use like addImage. | 
| void | Fileset. removeImageSet(java.util.Collection<Image> targets)use like removeImage | 
| protected void | Fileset. setImages(java.util.Set<Image> images)setter for images should be avoided. | 
| Modifier and Type | Field and Description | 
|---|---|
| protected Image | Roi. image | 
| Modifier and Type | Method and Description | 
|---|---|
| Image | Roi. getImage()Many-to-one field ome.model.roi.Roi.image (ome.model.core.Image) | 
| Modifier and Type | Method and Description | 
|---|---|
| void | Roi. setImage(Image image) | 
| Modifier and Type | Field and Description | 
|---|---|
| protected Image | WellSample. image | 
| Modifier and Type | Method and Description | 
|---|---|
| Image | WellSample. getImage()Many-to-one field ome.model.screen.WellSample.image (ome.model.core.Image) | 
| Modifier and Type | Method and Description | 
|---|---|
| void | WellSample. setImage(Image image) | 
| Constructor and Description | 
|---|
| WellSample(Well _well,
          Image _image) | 
| Modifier and Type | Method and Description | 
|---|---|
| protected void | DeleteBean. collect(ome.services.delete.UnloadedCollector delete,
       Image i)Walks the  Imagegraph collecting unloaded instances of all
 entities for later delete. | 
| protected void | DeleteBean. getImageAndCount(Image[] images,
                long id,
                ome.services.delete.UnloadedCollector delete)Uses the locally defined query to load an  Imageand callsDeleteBean.collect(UnloadedCollector, Image)in order to define a list of
 what will be deleted. | 
| Modifier and Type | Method and Description | 
|---|---|
| protected void | TablesBridge. handleImage(Image image,
           org.apache.lucene.document.Document document,
           org.hibernate.search.bridge.LuceneOptions opts)Deprecated.  Processes any annotations attached to the following types which contain
 this image: Plate, Dataset | 
| Modifier and Type | Method and Description | 
|---|---|
| static <T extends IObject> | HierarchyTransformations. invertPDI(java.util.Set<Image> imagesAll,
         CBlock<T> block) | 
                
                
Version: 5.4.8-ice35-b99
Copyright © 2018 The University of Dundee & Open Microscopy Environment. All Rights Reserved.