| Package | Description | 
|---|---|
| ome.api | 
 Contains the central verbs of the Omero System. 
 | 
| ome.model.annotations | |
| ome.model.containers | |
| ome.model.core | |
| ome.model.fs | |
| ome.model.roi | |
| ome.model.screen | |
| ome.services.delete | 
 Implementations of the ome.api.IDelete service. 
 | 
| ome.services.fulltext.bridges | 
 Custom FieldBridge implementations which can be configured to be run on each
indexing activity. 
 | 
| ome.tools | 
 OMERO Server Utility and Spring/Hibernate Tools
        Classes/Interfaces that implement File, Hibernate, Spring, Annotation, Hierarchy, etc. method
        mechanics for the OMERO server
Related Documentation
For more information, please see:
  
        TODO
  
 
 | 
| Modifier and Type | Method and Description | 
|---|---|
<T extends IObject> | 
IContainer.getImages(Class<T> rootNodeType,
         Set<Long> rootNodeIds,
         Parameters options)
Retrieve a user's (or all users') images within any given container. 
 | 
Set<Image> | 
IContainer.getImagesByOptions(Parameters options)
Retrieve images by options. 
 | 
Set<Image> | 
IAnalysis.getImagesForDataset(long datasetId)  | 
Set<Image> | 
IContainer.getUserImages(Parameters options)
Retrieve a user's images. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
Image | 
ImageAnnotationLink.parent()  | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
ImageAnnotationLink.link(Image parent,
    Annotation child)  | 
| Modifier and Type | Method and Description | 
|---|---|
Image | 
DatasetImageLink.child()  | 
| Modifier and Type | Method and Description | 
|---|---|
Iterator<Image> | 
Dataset.linkedImageIterator()
provides an iterator over the parent values of the imageLinks. 
 | 
List<Image> | 
Dataset.linkedImageList()
produces a  
List-copy of the underlying collection. | 
| Modifier and Type | Method and Description | 
|---|---|
Set<DatasetImageLink> | 
Dataset.findDatasetImageLink(Image target)
find all ome.model.containers.DatasetImageLink which have the argument as their child. 
 | 
void | 
DatasetImageLink.link(Dataset parent,
    Image child)  | 
DatasetImageLink | 
Dataset.linkImage(Image addition)
Adds a ome.model.containers.DatasetImageLink to imageLinks . 
 | 
void | 
Dataset.unlinkImage(Image removal)
unlinks all ome.model.core.Image instances from this instance. 
 | 
| Modifier and Type | Field and Description | 
|---|---|
protected Image | 
Pixels.image  | 
| Modifier and Type | Method and Description | 
|---|---|
Image | 
Pixels.getImage()
Many-to-one field ome.model.core.Pixels.image (ome.model.core.Image) 
 | 
Image | 
Image.newInstance()  | 
Image | 
Image.proxy()  | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
Pixels.setImage(Image image)  | 
| Constructor and Description | 
|---|
Pixels(Image _image,
      PixelsType _pixelsType,
      Integer _sizeX,
      Integer _sizeY,
      Integer _sizeZ,
      Integer _sizeC,
      Integer _sizeT,
      String _sha1,
      DimensionOrder _dimensionOrder)  | 
| Modifier and Type | Field and Description | 
|---|---|
protected Set<Image> | 
Fileset.images  | 
| Modifier and Type | Method and Description | 
|---|---|
protected Set<Image> | 
Fileset.getImages()
returns images . 
 | 
Iterator<Image> | 
Fileset.iterateImages()
should be used rather than accessing the images set directly. 
 | 
Collection<Image> | 
Fileset.unmodifiableImages()
Returns an unmodifiable collection-view 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
Fileset.addImage(Image target)
use instead of setImages . 
 | 
void | 
Fileset.removeImage(Image target)
removes a single element from this set and makes the inverse call on ome.model.core.Image 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
Fileset.addImageSet(Collection<Image> targets)
use like addImage. 
 | 
void | 
Fileset.removeImageSet(Collection<Image> targets)
use like removeImage 
 | 
protected void | 
Fileset.setImages(Set<Image> images)
setter for images should be avoided. 
 | 
| Modifier and Type | Field and Description | 
|---|---|
protected Image | 
Roi.image  | 
| Modifier and Type | Method and Description | 
|---|---|
Image | 
Roi.getImage()
Many-to-one field ome.model.roi.Roi.image (ome.model.core.Image) 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
Roi.setImage(Image image)  | 
| Modifier and Type | Field and Description | 
|---|---|
protected Image | 
WellSample.image  | 
| Modifier and Type | Method and Description | 
|---|---|
Image | 
WellSample.getImage()
Many-to-one field ome.model.screen.WellSample.image (ome.model.core.Image) 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
WellSample.setImage(Image image)  | 
| Constructor and Description | 
|---|
WellSample(Well _well,
          Image _image)  | 
| Modifier and Type | Method and Description | 
|---|---|
protected void | 
DeleteBean.collect(ome.services.delete.UnloadedCollector delete,
       Image i)
Walks the  
Image graph collecting unloaded instances of all
 entities for later delete. | 
protected void | 
DeleteBean.getImageAndCount(Image[] images,
                long id,
                ome.services.delete.UnloadedCollector delete)
Uses the locally defined query to load an  
Image and calls
 DeleteBean.collect(UnloadedCollector, Image) in order to define a list of
 what will be deleted. | 
| Modifier and Type | Method and Description | 
|---|---|
protected void | 
TablesBridge.handleImage(Image image,
           org.apache.lucene.document.Document document,
           org.hibernate.search.bridge.LuceneOptions opts)
Processes any annotations attached to the following types which contain
 this image: Plate, Dataset 
 | 
| Modifier and Type | Method and Description | 
|---|---|
static <T extends IObject> | 
HierarchyTransformations.invertPDI(Set<Image> imagesAll,
         CBlock<T> block)  | 
                
                
Version: 5.2.6-ice35-b35
Copyright © 2016 The University of Dundee & Open Microscopy Environment. All Rights Reserved.