Object sessionContext
ImportContainer container
Long logFileId
omero.grid.ImportResponse importResponse
ImportLibrary.ImportCallback.onFinished(Response, Status, Current)
has
not yet been called with a non-error response. Field is volatile
because a separate Thread
will fill in the value.String filePath
loci.formats.IFormatReader bfReader
AtomicReference<V> reader
int seriesIndex
String message
ArcType type
Long id
Integer version
String manufacturer
String model
String lotNumber
String serialNumber
ElectricPotential voltage
Double gain
Double offsetValue
Double zoom
Double amplificationGain
DetectorType type
Instrument instrument
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
ElectricPotential voltage
Double gain
Double offsetValue
Frequency readOutRate
Binning binning
Integer integration
Double zoom
Detector detector
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String manufacturer
String model
String lotNumber
String serialNumber
Instrument instrument
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
FilamentType type
Long id
Integer version
String manufacturer
String model
String lotNumber
String serialNumber
String filterWheel
FilterType type
TransmittanceRange transmittanceRange
Instrument instrument
Set<E> excitationFilterLink
Map<K,V> excitationFilterLinkCountPerOwner
Set<E> emissionFilterLink
Map<K,V> emissionFilterLinkCountPerOwner
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String manufacturer
String model
String lotNumber
String serialNumber
Instrument instrument
Set<E> excitationFilterLink
Map<K,V> excitationFilterLinkCountPerOwner
Dichroic dichroic
Set<E> emissionFilterLink
Map<K,V> emissionFilterLinkCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Microscope microscope
Set<E> detector
Set<E> objective
Set<E> lightSource
Set<E> filter
Set<E> dichroic
Set<E> filterSet
Set<E> otf
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
LaserType type
LaserMedium laserMedium
Integer frequencyMultiplication
Boolean tuneable
Pulse pulse
Length wavelength
Boolean pockelCell
LightSource pump
Frequency repetitionRate
Long id
Integer version
List<E> excitationFilterLink
Map<K,V> excitationFilterLinkCountPerOwner
Dichroic dichroic
Set<E> emissionFilterLink
Map<K,V> emissionFilterLinkCountPerOwner
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Double attenuation
Length wavelength
LightSource lightSource
MicrobeamManipulation microbeamManipulation
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String manufacturer
String model
Power power
String lotNumber
String serialNumber
Instrument instrument
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String manufacturer
String model
String lotNumber
String serialNumber
Double nominalMagnification
Double calibratedMagnification
Double lensNA
Immersion immersion
Correction correction
Length workingDistance
Boolean iris
Instrument instrument
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Integer sizeX
Integer sizeY
Boolean opticalAxisAveraged
PixelsType pixelsType
String path
FilterSet filterSet
Objective objective
Instrument instrument
Details details
Map<K,V> _dynamicFields
boolean _loaded
Boolean boolValue
Double doubleValue
OriginalFile file
Long longValue
String termValue
String textValue
Timestamp timeValue
Long id
Integer version
Set<E> projectLinks
Map<K,V> projectLinksCountPerOwner
Set<E> imageLinks
Map<K,V> imageLinksCountPerOwner
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Set<E> datasetLinks
Map<K,V> datasetLinksCountPerOwner
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
StatsInfo statsInfo
Integer red
Integer green
Integer blue
Integer alpha
String lookupTable
LogicalChannel logicalChannel
Pixels pixels
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Integer series
Timestamp acquisitionDate
Boolean archived
Boolean partial
Format format
ImagingEnvironment imagingEnvironment
ObjectiveSettings objectiveSettings
Instrument instrument
StageLabel stageLabel
Experiment experiment
List<E> pixels
Set<E> wellSamples
Set<E> rois
Set<E> datasetLinks
Map<K,V> datasetLinksCountPerOwner
Fileset fileset
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String name
Length pinHoleSize
Illumination illumination
ContrastMethod contrastMethod
Length excitationWave
Length emissionWave
String fluor
Double ndFilter
OTF otf
DetectorSettings detectorSettings
LightSettings lightSourceSettings
FilterSet filterSet
Integer samplesPerPixel
PhotometricInterpretation photometricInterpretation
AcquisitionMode mode
Integer pockelCellSetting
Set<E> channels
LightPath lightPath
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Set<E> pixelsFileMaps
Map<K,V> pixelsFileMapsCountPerOwner
String path
Long size
Timestamp atime
Timestamp mtime
Timestamp ctime
ChecksumAlgorithm hasher
String hash
String mimetype
Set<E> filesetEntries
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Image image
Pixels relatedTo
PixelsType pixelsType
Integer significantBits
Integer sizeX
Integer sizeY
Integer sizeZ
Integer sizeC
Integer sizeT
String sha1
DimensionOrder dimensionOrder
Length physicalSizeX
Length physicalSizeY
Length physicalSizeZ
Integer waveStart
Integer waveIncrement
Time timeIncrement
String methodology
Set<E> planeInfo
Set<E> pixelsFileMaps
Map<K,V> pixelsFileMapsCountPerOwner
List<E> channels
Set<E> settings
Set<E> thumbnails
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Pixels pixels
Integer theZ
Integer theC
Integer theT
Time deltaT
Length positionX
Length positionY
Length positionZ
Time exposureTime
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
RenderingDef renderingDef
Family family
Double coefficient
Double inputStart
Double inputEnd
Boolean active
Boolean noiseReduction
Integer red
Integer green
Integer blue
Integer alpha
String lookupTable
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Pixels pixels
Integer defaultZ
Integer defaultT
RenderingModel model
List<E> waveRendering
String name
Double compression
QuantumDef quantization
List<E> spatialDomainEnhancement
Details details
Map<K,V> _dynamicFields
boolean _loaded
Boolean reverse
Long id
Integer version
List<E> usedFiles
Set<E> images
List<E> jobLinks
Map<K,V> jobLinksCountPerOwner
String templatePrefix
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Event _update
IObject _context
Permissions _perms
ExternalInfo _externalInfo
Event _creation
Experimenter _owner
ExperimenterGroup _group
Set<E> _filteredCollections
Map<K,V> _dynamicFields
Object[] contexts
long perm1
boolean[] restrictions
Permissions.perm1
) and the current calling context.String[] extendedRestrictions
Long id
Integer version
String username
String groupname
String type
String message
JobStatus status
Timestamp submitted
Timestamp scheduledFor
Timestamp started
Timestamp finished
Set<E> originalFileLinks
Map<K,V> originalFileLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
String description
Long id
String status
Timestamp time
Experimenter experimenter
ExperimenterGroup experimenterGroup
EventType type
Event containingEvent
Set<E> logs
Session session
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
List<E> groupExperimenterMap
String omeName
String firstName
String middleName
String lastName
String institution
Boolean ldap
String email
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String name
Boolean ldap
Set<E> groupExperimenterMap
List<E> config
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
List<E> keywords
Boolean multivalued
Boolean display
String displayName
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Set<E> sessions
String uuid
String conn
Timestamp up
Timestamp down
Integer scale
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Node node
String uuid
Experimenter owner
Long timeToIdle
Long timeToLive
Timestamp started
Timestamp closed
String message
String defaultEventType
String userAgent
String userIP
Set<E> events
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
ExperimenterGroup group
Long itemCount
Boolean active
byte[] data
Long id
Integer version
String name
List<E> shapes
Image image
OriginalFile source
List<E> namespaces
List<E> keywords
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Integer theZ
Integer theT
Integer theC
Roi roi
Boolean locked
String g
String transform
String vectorEffect
Boolean visibility
Integer fillColor
String fillRule
Integer strokeColor
String strokeDashArray
Integer strokeDashOffset
String strokeLineCap
String strokeLineJoin
Integer strokeMiterLimit
Length strokeWidth
String fontFamily
Length fontSize
String fontStretch
String fontStyle
String fontVariant
String fontWeight
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
Integer defaultSample
String columnNamingConvention
String rowNamingConvention
Length wellOriginX
Length wellOriginY
Integer rows
Integer columns
String status
String externalIdentifier
Set<E> screenLinks
Map<K,V> screenLinksCountPerOwner
Set<E> wells
Set<E> plateAcquisitions
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String name
Timestamp startTime
Timestamp endTime
Integer maximumFieldCount
Plate plate
Set<E> wellSample
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String name
String reagentIdentifier
Screen screen
Set<E> wellLinks
Map<K,V> wellLinksCountPerOwner
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String type
String protocolIdentifier
String protocolDescription
String reagentSetIdentifier
String reagentSetDescription
Set<E> plateLinks
Map<K,V> plateLinksCountPerOwner
Set<E> reagents
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
String name
String description
Details details
Map<K,V> _dynamicFields
boolean _loaded
Long id
Integer version
String status
Integer column
Integer row
Integer red
Integer green
Integer blue
Integer alpha
Set<E> reagentLinks
Map<K,V> reagentLinksCountPerOwner
String externalDescription
String externalIdentifier
String type
List<E> wellSamples
Plate plate
Set<E> annotationLinks
Map<K,V> annotationLinksCountPerOwner
Details details
Map<K,V> _dynamicFields
boolean _loaded
BigDecimal result
double value
UnitsElectricPotential unit
ElectricPotential.value
field.double value
UnitsFrequency unit
Frequency.value
field.double value
UnitsLength unit
Length.value
field.double value
UnitsPower unit
Power.value
field.double value
UnitsPressure unit
Pressure.value
field.double value
UnitsTemperature unit
Temperature.value
field.double value
UnitsTime unit
Time.value
field.private void readObject(ObjectInputStream s) throws IOException, ClassNotFoundException
IOException
ClassNotFoundException
private void writeObject(ObjectOutputStream s) throws IOException
IOException
private void readObject(ObjectInputStream s) throws IOException, ClassNotFoundException
IOException
ClassNotFoundException
ACLVoter aclVoter
Principal p
PrincipalHolder.login(Principal)
.SessionStats stats
Set<E> disabledSubsystems
Set<E> serviceCleanups
Set<E> lockCandidates
List<E> logs
Event event
Experimenter owner
ExperimenterGroup group
Map<K,V> callContext
Map<K,V> groupPermissionsMap
CurrentDetails cd
CurrentDetails cd
TokenHolder th
CurrentDetails cd
TokenHolder th
CurrentDetails cd
Long id
Long id
Pixels pixelsObj
RenderingDef rendDefObj
ReentrantReadWriteLock rwl
Executor ex
SecuritySystem secSys
LocalCompress compressionSrv
Integer resolutionLevel
boolean requestedRenderingDef
RenderingBean.saveCurrentSettings()
will not redirect to RenderingBean.saveAsNewSettings()
if
the rendering def does not belong to the current user.ome.services.SearchBean.ActionList actions
SearchValues values
List<E> results
Boolean dirty
Boolean dirtyMetadata
metadata
is dirty.Pixels pixels
Long pixelsId
boolean inProgress
RenderingDef settings
Thumbnail thumbnailMetadata
ThumbnailCtx ctx
org.springframework.core.io.Resource inProgressImageResource
ReentrantReadWriteLock rwl
Ring ring
SessionManager manager
Executor ex
Principal p
String uuid
Principal principal
Executor executor
Redirector redirector
Ice.Communicator communicator
Registry registry
Ice.ObjectAdapter adapter
String directProxy
SessionManager
in this blitz instance.OmeroContext context
Ice.ObjectAdapter adapter
SecuritySystem securitySystem
SessionManager sessionManager
Executor executor
Ring ring
Registry registry
TopicManager topicManager
AtomicBoolean loaded
int servantsPerSession
com.google.common.cache.Cache<K,V> sessionToHolder
ServiceFactoryI
instances for a given
session since there is no method on ObjectAdapter
to retrieve
all servants.Helper helper
Ice.ObjectAdapter oa
Registry reg
Executor ex
Principal p
FileMaker fileMaker
PublicRepositoryI servant
omero.model.OriginalFile description
omero.grid.RepositoryPrx proxy
String repoUuid
AtomicReference<V> state
BfPixelsWrapper reader
OriginalFilesService fs
List<E> checkedPaths
CheckedPath logFile
Helper helper
byte[] arrayBuf
Registry reg
TileSizes sizes
RepositoryDao dao
CheckedPath logPath
String logFilename
omero.api.ServiceFactoryPrx sf
OMEROMetadataStoreClient store
OMEROWrapper reader
CheckedPath file
omero.model.IObject userSpecifiedTarget
String userSpecifiedName
String userSpecifiedDescription
double[] userPixels
List<E> annotationList
boolean doThumbnails
boolean noStatsInfo
String fileName
String shortName
String format
String formatString
String[] usedFiles
Map<K,V> objects
List<E> pixList
List<E> imageList
List<E> plateList
boolean autoClose
String token
omero.cmd.HandlePrx handle
ScriptRepoHelper helper
String key
String readableName
EventLogLoader loader
EventLog log
Throwable throwable
String message
String id
Object resource
Object resource
Annotation[] annotation
String[] path
Class<T>[] annCls
Class<T>[] type
Object[] value
boolean[] fetch
List<E> fetchAnnotationsCopy
AnnotatedWith.fetch
are not fetched again.boolean useNamespace
boolean useLike
Class<T> cls
SearchAction a
SearchAction b
String query
Parameters params
SearchAction a
SearchAction b
SearchValues values
List<E> chainedList
IObject
instances which have currently been found. This
SearchAction
may want to take these values into account if
present.boolean caseSensitive
int batchSize
boolean mergedBatches
boolean returnUnloaded
boolean useProjections
boolean leadingWildcard
boolean idOnly
List<E> fetchAnnotations
List<E> fetches
List<E> orderBy
Timestamp createdStart
Timestamp createdStop
Timestamp modifiedStart
Timestamp modifiedStop
Timestamp annotatedStart
Timestamp annotatedStop
List<E> onlyIds
List<E> onlyTypes
List<E> onlyAnnotatedWith
Details ownedBy
Details notOwnedBy
Details annotatedBy
Details notAnnotatedBy
String[] terms
String str
boolean byTagForGroups
SearchAction a
SearchAction b
String name
String group
String type
PreferenceContext preferences
com.google.common.base.Predicate<T> IS_ROOT_USER
com.google.common.base.Predicate<T> IS_USER_GROUP
com.google.common.base.Predicate<T> IS_SYSTEM_GROUP
long rId
String rName
long sgId
String sgName
long ugId
String ugName
long guestId
String guestName
long ggId
String ggName
Long shareId
Long csId
Long cgId
Long cuId
Long ceId
String csName
String cgName
String cuName
String ceType
boolean isAdmin
boolean isReadOnly
List<E> memberOfGroups
List<E> leaderOfGroups
Permissions umask
Permissions groupPermissions
Throwable t
int[] dataBuf
int sizeX1
int sizeX2
byte[][] bands
RGBBuffer.R_BAND
holds the
data for the red band, index RGBBuffer.G_BAND
holds the data for the green
band, and index RGBBuffer.B_BAND
holds the data for the blue band. The
size of each array is the one specified to the constructor.int sizeX1
int sizeX2
int[] dataBuf
int sizeX1
int sizeX2
int slice
PlaneDef.XY
, PlaneDef.XZ
or PlaneDef.ZY
constants defined by this class.int x
PlaneDef.slice
. Only relevant
in the context of an YZ-plane.int y
PlaneDef.slice
. Only relevant
in the context of an XZ-plane.int z
PlaneDef.slice
. Only relevant
in the context of an XY plane.int t
RegionDef region
int stride
boolean renderShapes
List<E> shapeIds
String reason
String val
boolean concurrency
long backOff
String type
String permissions
String permissions
Ice.ObjectAdapter adapter
Ice.Identity id
CountDownLatch latch
#finished(Response, Current)
is
called. Other methods will block on this value.CountDownLatch isInitialized
CountDownLatch isOnFinishedDone
AtomicReference<V> state
omero.cmd.HandlePrx handle
String message
String session
omero.RLong timeToLive
omero.RLong timeToIdle
org.slf4j.Logger log
Helper helper
CurrentDetails current
SessionManager manager
Map<K,V> contexts
omero.cmd.ResetPasswordResponse rsp
String sender
MailUtil mailUtil
PasswordUtil passwordUtil
SecuritySystem sec
PasswordProvider passwordProvider
Helper helper
Helper helper
LocalQuery query
LocalUpdate update
CurrentDetails current
SessionManager manager
SecuritySystem security
boolean updated
List<E> substeps
int current
int nextAt
List<E> statuses
List<E> responses
Helper helper
OmeroContext ctx
OmeroContext ctx
Helper helper
CountDownLatch latch
Helper helper
omero.cmd.ManageImageBinariesResponse rsp
PixelsService pixelsService
ACLVoter voter
Helper helper
omero.cmd.fs.ManageImageBinariesI.PixelFiles files
List<E> thumbnailFiles
omero.cmd.OriginalMetadataResponse rsp
PixelsService pixelsService
Helper helper
ACLVoter aclVoter
SystemTypes systemTypes
GraphPathBean graphPathBean
Deletion deletionInstance
Set<E> targetClasses
GraphPolicy graphPolicy
com.google.common.collect.SetMultimap<K,V> unnullable
List<E> graphPolicyAdjusters
Helper helper
GraphTraversal graphTraversal
GraphTraversal.PlanExecutor unlinker
GraphTraversal.PlanExecutor processor
int targetObjectCount
int deletedObjectCount
int movedObjectCount
GraphRequestFactory graphRequestFactory
com.google.common.collect.SetMultimap<K,V> targetObjects
IRequest chgrpRequest
ChgrpStepFactory factory
org.springframework.context.ApplicationContext specs
GraphSpec spec
GraphState state
Helper helper
Ice.Communicator ic
GraphPathBean graphPathBean
com.google.common.collect.ImmutableSet<E> defaultExcludeNs
com.google.common.base.Function<F,T> isIncludeType
com.google.common.base.Predicate<T> isTargetNamespace
ACLVoter aclVoter
Roles securityRoles
SystemTypes systemTypes
GraphPathBean graphPathBean
Deletion deletionInstance
Set<E> targetClasses
GraphPolicy graphPolicy
com.google.common.collect.SetMultimap<K,V> unnullable
long perm1
List<E> graphPolicyAdjusters
Helper helper
GraphTraversal graphTraversal
Set<E> acceptableGroups
GraphTraversal.PlanExecutor unlinker
GraphTraversal.PlanExecutor processor
int targetObjectCount
int deletedObjectCount
int changedObjectCount
GraphRequestFactory graphRequestFactory
com.google.common.collect.SetMultimap<K,V> targetObjects
IRequest chmodRequest
ChmodStrategy strategy
Helper helper
IObject target
Object[] checks
Ice.Communicator ic
ACLVoter aclVoter
SystemTypes systemTypes
GraphPathBean graphPathBean
Deletion deletionInstance
Set<E> targetClasses
GraphPolicy graphPolicy
com.google.common.collect.SetMultimap<K,V> unnullable
List<E> graphPolicyAdjusters
Helper helper
GraphTraversal graphTraversal
Set<E> acceptableGroupsFrom
Set<E> acceptableGroupsTo
GraphTraversal.PlanExecutor unlinker
GraphTraversal.PlanExecutor processor
int targetObjectCount
int deletedObjectCount
int givenObjectCount
GraphRequestFactory graphRequestFactory
com.google.common.collect.SetMultimap<K,V> targetObjects
IRequest chownRequest
ChownStepFactory factory
org.springframework.context.ApplicationContext specs
GraphSpec spec
GraphState state
Helper helper
Ice.Communicator ic
ACLVoter aclVoter
SystemTypes systemTypes
GraphPathBean graphPathBean
Set<E> targetClasses
Deletion deletionInstance
GraphPolicy graphPolicy
com.google.common.collect.SetMultimap<K,V> unnullable
List<E> graphPolicyAdjusters
Helper helper
GraphTraversal graphTraversal
GraphTraversal.PlanExecutor unlinker
GraphTraversal.PlanExecutor processor
int targetObjectCount
int deletedObjectCount
GraphRequestFactory graphRequestFactory
com.google.common.collect.SetMultimap<K,V> targetObjects
IRequest deleteRequest
int steps
PixelsService pixelsService
ThumbnailService thumbnailService
GraphPathBean graphPathBean
Helper helper
OmeroContext ctx
Helper helper
GraphPathBean graphPathBean
GraphRequestFactory graphRequestFactory
omero.cmd.Status graphRequestSkipStatus
omero.cmd.Status graphRequestPerformStatus
List<E> graphRequestSkipObjects
List<E> graphRequestPerformObjects
omero.cmd.GraphModify2 graphRequestSkip
omero.cmd.GraphModify2 graphRequestPerform
Helper helper
omero.model.IObject userSpecifiedTarget
omero.RString userSpecifiedName
omero.RString userSpecifiedDescription
double[] userSpecifiedPixels
List<E> userSpecifiedAnnotationList
omero.RBool doThumbnails
omero.RBool noStatsInfo
omero.model.ChecksumAlgorithm checksumAlgorithm
String name
String version
String description
String contact
String[] authors
String[] institutions
int[][] authorsInstitutions
Map<K,V> inputs
Map<K,V> outputs
String stdoutFormat
String stderrFormat
List<E> namespaces
Ice.ObjectAdapter adapter
Ice.Identity id
BlockingQueue<E> q
boolean poll
omero.grid.ProcessPrx process
long size
String[] values
omero.RInt version
omero.model.StatsInfo statsInfo
omero.RInt red
omero.RInt green
omero.RInt blue
omero.RInt alpha
omero.RString lookupTable
omero.model.LogicalChannel logicalChannel
omero.model.Pixels pixels
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.model.RenderingDef renderingDef
omero.model.Family family
omero.RDouble coefficient
omero.RDouble inputStart
omero.RDouble inputEnd
omero.RBool active
omero.RBool noiseReduction
omero.RInt red
omero.RInt green
omero.RInt blue
omero.RInt alpha
omero.RString lookupTable
omero.RInt version
List<E> projectLinksSeq
boolean projectLinksLoaded
Map<K,V> projectLinksCountPerOwner
List<E> imageLinksSeq
boolean imageLinksLoaded
Map<K,V> imageLinksCountPerOwner
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.model.Experimenter owner
omero.model.ExperimenterGroup group
omero.model.Event creationEvent
omero.model.Event updateEvent
omero.model.Permissions permissions
omero.model.ExternalInfo externalInfo
Map<K,V> call
omero.sys.EventContext event
client client
omero.api.ServiceFactoryPrx session
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.model.ElectricPotential voltage
omero.RDouble gain
omero.RDouble offsetValue
omero.RDouble zoom
omero.RDouble amplificationGain
omero.model.DetectorType type
omero.model.Instrument instrument
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.model.ElectricPotential voltage
omero.RDouble gain
omero.RDouble offsetValue
omero.model.Frequency readOutRate
omero.model.Binning binning
omero.RInt integration
omero.RDouble zoom
omero.model.Detector detector
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.model.Instrument instrument
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString status
omero.RTime time
omero.model.Experimenter experimenter
omero.model.ExperimenterGroup experimenterGroup
omero.model.EventType type
omero.model.Event containingEvent
List<E> logsSeq
boolean logsLoaded
omero.model.Session session
omero.RInt version
List<E> groupExperimenterMapSeq
boolean groupExperimenterMapLoaded
omero.RString omeName
omero.RString firstName
omero.RString middleName
omero.RString lastName
omero.RString institution
omero.RBool ldap
omero.RString email
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString name
omero.RBool ldap
List<E> groupExperimenterMapSeq
boolean groupExperimenterMapLoaded
List<E> config
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
List<E> usedFilesSeq
boolean usedFilesLoaded
List<E> imagesSeq
boolean imagesLoaded
List<E> jobLinksSeq
boolean jobLinksLoaded
Map<K,V> jobLinksCountPerOwner
omero.RString templatePrefix
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.RString filterWheel
omero.model.FilterType type
omero.model.TransmittanceRange transmittanceRange
omero.model.Instrument instrument
List<E> excitationFilterLinkSeq
boolean excitationFilterLinkLoaded
Map<K,V> excitationFilterLinkCountPerOwner
List<E> emissionFilterLinkSeq
boolean emissionFilterLinkLoaded
Map<K,V> emissionFilterLinkCountPerOwner
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.model.Instrument instrument
List<E> excitationFilterLinkSeq
boolean excitationFilterLinkLoaded
Map<K,V> excitationFilterLinkCountPerOwner
omero.model.Dichroic dichroic
List<E> emissionFilterLinkSeq
boolean emissionFilterLinkLoaded
Map<K,V> emissionFilterLinkCountPerOwner
omero.RInt version
omero.RInt series
omero.RTime acquisitionDate
omero.RBool archived
omero.RBool partial
omero.model.Format format
omero.model.ImagingEnvironment imagingEnvironment
omero.model.ObjectiveSettings objectiveSettings
omero.model.Instrument instrument
omero.model.StageLabel stageLabel
omero.model.Experiment experiment
List<E> pixelsSeq
boolean pixelsLoaded
List<E> wellSamplesSeq
boolean wellSamplesLoaded
List<E> roisSeq
boolean roisLoaded
List<E> datasetLinksSeq
boolean datasetLinksLoaded
Map<K,V> datasetLinksCountPerOwner
omero.model.Fileset fileset
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.model.Microscope microscope
List<E> detectorSeq
boolean detectorLoaded
List<E> objectiveSeq
boolean objectiveLoaded
List<E> lightSourceSeq
boolean lightSourceLoaded
List<E> filterSeq
boolean filterLoaded
List<E> dichroicSeq
boolean dichroicLoaded
List<E> filterSetSeq
boolean filterSetLoaded
List<E> otfSeq
boolean otfLoaded
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString username
omero.RString groupname
omero.RString type
omero.RString message
omero.model.JobStatus status
omero.RTime submitted
omero.RTime scheduledFor
omero.RTime started
omero.RTime finished
List<E> originalFileLinksSeq
boolean originalFileLinksLoaded
Map<K,V> originalFileLinksCountPerOwner
omero.RDouble x
omero.RDouble y
omero.RString textValue
omero.RString anchor
omero.RString decoration
omero.RString baselineShift
omero.RInt glyphOrientationVertical
omero.RString direction
omero.RString writingMode
omero.model.LaserType type
omero.model.LaserMedium laserMedium
omero.RInt frequencyMultiplication
omero.RBool tuneable
omero.model.Pulse pulse
omero.model.Length wavelength
omero.RBool pockelCell
omero.model.LightSource pump
omero.model.Frequency repetitionRate
omero.RInt version
List<E> excitationFilterLinkSeq
boolean excitationFilterLinkLoaded
Map<K,V> excitationFilterLinkCountPerOwner
omero.model.Dichroic dichroic
List<E> emissionFilterLinkSeq
boolean emissionFilterLinkLoaded
Map<K,V> emissionFilterLinkCountPerOwner
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.model.Power power
omero.RString lotNumber
omero.RString serialNumber
omero.model.Instrument instrument
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString name
omero.model.Length pinHoleSize
omero.model.Illumination illumination
omero.model.ContrastMethod contrastMethod
omero.model.Length excitationWave
omero.model.Length emissionWave
omero.RString fluor
omero.RDouble ndFilter
omero.model.OTF otf
omero.model.DetectorSettings detectorSettings
omero.model.LightSettings lightSourceSettings
omero.model.FilterSet filterSet
omero.RInt samplesPerPixel
omero.model.PhotometricInterpretation photometricInterpretation
omero.model.AcquisitionMode mode
omero.RInt pockelCellSetting
List<E> channelsSeq
boolean channelsLoaded
omero.model.LightPath lightPath
omero.RInt version
String[] keywords
omero.RBool multivalued
omero.RBool display
omero.RString displayName
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
List<E> sessionsSeq
boolean sessionsLoaded
omero.RString uuid
omero.RString conn
omero.RTime up
omero.RTime down
omero.RInt scale
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString manufacturer
omero.RString model
omero.RString lotNumber
omero.RString serialNumber
omero.RDouble nominalMagnification
omero.RDouble calibratedMagnification
omero.RDouble lensNA
omero.model.Immersion immersion
omero.model.Correction correction
omero.model.Length workingDistance
omero.RBool iris
omero.model.Instrument instrument
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
List<E> pixelsFileMapsSeq
boolean pixelsFileMapsLoaded
Map<K,V> pixelsFileMapsCountPerOwner
omero.RString path
omero.RLong size
omero.RTime atime
omero.RTime mtime
omero.RTime ctime
omero.model.ChecksumAlgorithm hasher
omero.RString hash
omero.RString mimetype
List<E> filesetEntriesSeq
boolean filesetEntriesLoaded
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RInt version
omero.RInt sizeX
omero.RInt sizeY
omero.RBool opticalAxisAveraged
omero.model.PixelsType pixelsType
omero.RString path
omero.model.FilterSet filterSet
omero.model.Objective objective
omero.model.Instrument instrument
omero.RInt version
omero.model.Image image
omero.model.Pixels relatedTo
omero.model.PixelsType pixelsType
omero.RInt significantBits
omero.RInt sizeX
omero.RInt sizeY
omero.RInt sizeZ
omero.RInt sizeC
omero.RInt sizeT
omero.RString sha1
omero.model.DimensionOrder dimensionOrder
omero.model.Length physicalSizeX
omero.model.Length physicalSizeY
omero.model.Length physicalSizeZ
omero.RInt waveStart
omero.RInt waveIncrement
omero.model.Time timeIncrement
omero.RString methodology
List<E> planeInfoSeq
boolean planeInfoLoaded
List<E> pixelsFileMapsSeq
boolean pixelsFileMapsLoaded
Map<K,V> pixelsFileMapsCountPerOwner
List<E> channelsSeq
boolean channelsLoaded
List<E> settingsSeq
boolean settingsLoaded
List<E> thumbnailsSeq
boolean thumbnailsLoaded
omero.RInt version
omero.model.Pixels pixels
omero.RInt theZ
omero.RInt theC
omero.RInt theT
omero.model.Time deltaT
omero.model.Length positionX
omero.model.Length positionY
omero.model.Length positionZ
omero.model.Time exposureTime
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RInt defaultSample
omero.RString columnNamingConvention
omero.RString rowNamingConvention
omero.model.Length wellOriginX
omero.model.Length wellOriginY
omero.RInt rows
omero.RInt columns
omero.RString status
omero.RString externalIdentifier
List<E> screenLinksSeq
boolean screenLinksLoaded
Map<K,V> screenLinksCountPerOwner
List<E> wellsSeq
boolean wellsLoaded
List<E> plateAcquisitionsSeq
boolean plateAcquisitionsLoaded
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.RString name
omero.RTime startTime
omero.RTime endTime
omero.RInt maximumFieldCount
omero.model.Plate plate
List<E> wellSampleSeq
boolean wellSampleLoaded
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
List<E> datasetLinksSeq
boolean datasetLinksLoaded
Map<K,V> datasetLinksCountPerOwner
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.RString name
omero.RString reagentIdentifier
omero.model.Screen screen
List<E> wellLinksSeq
boolean wellLinksLoaded
Map<K,V> wellLinksCountPerOwner
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
omero.model.Pixels pixels
omero.RInt defaultZ
omero.RInt defaultT
omero.model.RenderingModel model
List<E> waveRenderingSeq
boolean waveRenderingLoaded
omero.RString name
omero.RDouble compression
omero.model.QuantumDef quantization
List<E> spatialDomainEnhancementSeq
boolean spatialDomainEnhancementLoaded
omero.RInt version
omero.RString name
List<E> shapesSeq
boolean shapesLoaded
omero.model.Image image
omero.model.OriginalFile source
String[] namespaces
String[][] keywords
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString description
omero.RInt version
omero.RString type
omero.RString protocolIdentifier
omero.RString protocolDescription
omero.RString reagentSetIdentifier
omero.RString reagentSetDescription
List<E> plateLinksSeq
boolean plateLinksLoaded
Map<K,V> plateLinksCountPerOwner
List<E> reagentsSeq
boolean reagentsLoaded
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RString name
omero.RString description
omero.RInt version
omero.model.Node node
omero.RString uuid
omero.model.Experimenter owner
omero.RLong timeToIdle
omero.RLong timeToLive
omero.RTime started
omero.RTime closed
omero.RString message
omero.RString defaultEventType
omero.RString userAgent
omero.RString userIP
List<E> eventsSeq
boolean eventsLoaded
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RInt theZ
omero.RInt theT
omero.RInt theC
omero.model.Roi roi
omero.RBool locked
omero.RString g
omero.RString transform
omero.RString vectorEffect
omero.RBool visibility
omero.RInt fillColor
omero.RString fillRule
omero.RInt strokeColor
omero.RString strokeDashArray
omero.RInt strokeDashOffset
omero.RString strokeLineCap
omero.RString strokeLineJoin
omero.RInt strokeMiterLimit
omero.model.Length strokeWidth
omero.RString fontFamily
omero.model.Length fontSize
omero.RString fontStretch
omero.RString fontStyle
omero.RString fontVariant
omero.RString fontWeight
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
omero.RInt version
omero.RString status
omero.RInt column
omero.RInt row
omero.RInt red
omero.RInt green
omero.RInt blue
omero.RInt alpha
List<E> reagentLinksSeq
boolean reagentLinksLoaded
Map<K,V> reagentLinksCountPerOwner
omero.RString externalDescription
omero.RString externalIdentifier
omero.RString type
List<E> wellSamplesSeq
boolean wellSamplesLoaded
omero.model.Plate plate
List<E> annotationLinksSeq
boolean annotationLinksLoaded
Map<K,V> annotationLinksCountPerOwner
long shareId
long sessionId
String sessionUuid
long userId
String userName
long groupId
String groupName
boolean isAdmin
long eventId
String eventType
List<E> memberOfGroups
List<E> leaderOfGroups
omero.model.Permissions groupPermissions
String categoryName
AtomicLong loadCount
AtomicLong fetchCount
AtomicLong updateCount
AtomicLong removeCount
AtomicLong recreateCount
AtomicLong loadCount
AtomicLong updateCount
AtomicLong insertCount
AtomicLong deleteCount
AtomicLong fetchCount
AtomicLong optimisticFailureCount
AtomicLong cacheHitCount
AtomicLong cacheMissCount
AtomicLong cachePutCount
AtomicLong executionCount
AtomicLong executionRowCount
AtomicLong executionMaxTime
AtomicLong executionMinTime
AtomicLong totalExecutionTime
Lock readLock
Lock writeLock
AtomicLong hitCount
AtomicLong missCount
AtomicLong putCount
long cacheHitCount
long cacheMissCount
long cachePutCount
long executionCount
long executionRowCount
long executionAvgTime
long executionMaxTime
long executionMinTime
Version: 5.1.3-ice35-b52
Copyright © 2015 The University of Dundee & Open Microscopy Environment. All Rights Reserved.