pojos

Class MaskData

java.lang.Object

pojos.DataObject

pojos.ShapeData

pojos.MaskData

public class MaskData
extends ShapeData

Represents an Mask in the Euclidean space R².

Since:

3.0-Beta4

Version:

3.0 (Internal version: $Revision: $Date: $)

Author:

Jean-Marie Burel j.burel@dundee.ac.uk, Donald MacDonald donald@lifesci.dundee.ac.uk

Field Summary

Fields inherited from class pojos.ShapeData

READONLY_FLAG, settings

Constructor Summary

Constructors

Constructor and Description
MaskData() Creates a new instance of MaskData.
MaskData(double x, double y, double width, double height, byte[] mask) Creates a new instance of the MaskData.
MaskData(omero.model.Shape shape) Creates a new instance.

Method Summary

Methods

Modifier and Type	Method and Description
byte	getBit(byte[] data, int bit) Sets the bit value in a byte array at position bit to be the value value.
double	getHeight() Returns the height of the mask.
byte[]	getMask() Returns the mask as a byte array.
int[][]	getMaskAsBinaryArray() Returns the mask image.
BufferedImage	getMaskAsBufferedImage() Returns the mask image.
String	getText() Returns the text of the shape.
double	getWidth() Returns the width of the mask.
double	getX() Returns the x-coordinate of the top-left corner of the mask.
double	getY() Returns the y-coordinate of the top-left corner of the mask.
void	setBit(byte[] data, int bit, int val) Sets the bit value in a byte array at position bit to be the value value.
void	setHeight(double height) Sets the height of an untransformed mask.
void	setMask(BufferedImage image) Sets the mask from the bufferedImage.
void	setMask(byte[] mask) Sets the mask image.
void	setText(String text) Sets the text of the shape.
void	setWidth(double width) Sets the width of an untransformed mask.
void	setX(double x) Sets the x-coordinate top-left corner of an untransformed mask.
void	setY(double y) Sets the y-coordinate top-left corner of an untransformed mask.

Methods inherited from class pojos.ShapeData

fromPoints, getC, getROICoordinate, getShapeSettings, getT, getTransform, getZ, isClientObject, isReadOnly, isVisible, parsePointsToIntegerList, parsePointsToPoint2DList, setC, setClientObject, setDirty, setReadOnly, setROICoordinate, setShapeSettings, setT, setTransform, setVisible, setZ, toNumber, toPoints

Methods inherited from class pojos.DataObject

asAnnotation, asChannel, asDataset, asExperimenter, asGroup, asIAnnotated, asImage, asIObject, asPixels, asPlate, asPojo, asPojos, asPojos, asProject, asScreen, asWell, asWellSample, canAnnotate, canDelete, canEdit, canLink, getCreated, getDetails, getGroupId, getId, getOwner, getPermissions, getUpdated, getVersion, isDirty, isLoaded, nullDetails, nullSafe, nullSafe, nullSafe, nullSafe, nullSafe, nullSafe, nullSafe, nullSafe, setId, setValue, setVersion, timeOfEvent, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

MaskData

public MaskData(omero.model.Shape shape)

Creates a new instance.

Parameters:

shape - The shape this object represents.

MaskData

public MaskData()

Creates a new instance of MaskData.

MaskData

public MaskData(double x,
        double y,
        double width,
        double height,
        byte[] mask)

Creates a new instance of the MaskData.

Parameters:

x - The x-coordinate of the top-left corner of the image.

y - The y-coordinate of the top-left corner of the image.

widht - The width of the image.

height - The height of the image.

mask - The mask image.

Method Detail

getText

public String getText()

Returns the text of the shape.

Returns:

See above.

setText

public void setText(String text)

Sets the text of the shape.

Parameters:

text - See above.

getX

public double getX()

Returns the x-coordinate of the top-left corner of the mask.

Returns:

See above.

setX

public void setX(double x)

Sets the x-coordinate top-left corner of an untransformed mask.

Parameters:

x - The value to set.

getY

public double getY()

Returns the y-coordinate of the top-left corner of the mask.

Returns:

See above.

setY

public void setY(double y)

Sets the y-coordinate top-left corner of an untransformed mask.

Parameters:

y - See above.

getWidth

public double getWidth()

Returns the width of the mask.

Returns:

See above.

setWidth

public void setWidth(double width)

Sets the width of an untransformed mask.

Parameters:

width - See above.

getHeight

public double getHeight()

Returns the height of the mask.

Returns:

See above.

setHeight

public void setHeight(double height)

Sets the height of an untransformed mask.

Parameters:

height - See above.

setMask

public void setMask(byte[] mask)

Sets the mask image.

Parameters:

mask - See above.

setMask

public void setMask(BufferedImage image)

Sets the mask from the bufferedImage.

Parameters:

image - See above.

getMaskAsBufferedImage

public BufferedImage getMaskAsBufferedImage()

Returns the mask image.

Returns:

See above.

getMaskAsBinaryArray

public int[][] getMaskAsBinaryArray()

Returns the mask image.

Returns:

See above.

getMask

public byte[] getMask()

Returns the mask as a byte array.

Returns:

See above.

setBit

public void setBit(byte[] data,
          int bit,
          int val)

Sets the bit value in a byte array at position bit to be the value value.

Parameters:

data - See above.

bit - See above.

val - See above.

getBit

public byte getBit(byte[] data,
          int bit)

Sets the bit value in a byte array at position bit to be the value value.

Parameters:

data - See above.

bit - See above.

val - See above.