Uses of Interface
loci.formats.codec.Codec

Packages that use Codec

Package	Description
loci.formats	Bio-Formats: a library for reading and writing popular microscopy file formats.
loci.formats.codec
loci.formats.in	Package containing Bio-Formats file format readers.
loci.formats.out	Package containing Bio-Formats file format writers.
loci.formats.tiff	Package containing Bio-Formats TIFF code of general utility.

Uses of Codec in loci.formats

Methods in loci.formats that return Codec

Modifier and Type	Method	Description
default Codec	ICompressedTileWriter.getCodec()
Codec	ImageWriter.getCodec()
Codec	WriterWrapper.getCodec()
Codec	ChannelFiller.getTileCodec(int no)
Codec	ChannelMerger.getTileCodec(int no)
Codec	ChannelSeparator.getTileCodec(int no)
Codec	DimensionSwapper.getTileCodec(int no)
Codec	FileStitcher.getTileCodec(int no)
default Codec	ICompressedTileReader.getTileCodec(int no)	Retrieve a codec that can be used to decompress compressed tiles.
Codec	ImageReader.getTileCodec(int no)
Codec	ReaderWrapper.getTileCodec(int no)
Codec	TileStitcher.getTileCodec(int no)

Uses of Codec in loci.formats.codec

Classes in loci.formats.codec that implement Codec

Modifier and Type	Class	Description
class	Base64Codec	Implements encoding (compress) and decoding (decompress) methods for Base64.
class	BaseCodec	BaseCodec contains default implementation and testing for classes implementing the Codec interface, and acts as a base class for any of the compression classes.
class	HuffmanCodec	This class implements Huffman decoding.
class	JPEG2000Codec	This class implements JPEG 2000 compression and decompression.
class	JPEGCodec	This class implements JPEG compression and decompression.
class	JPEGXRCodec
class	LosslessJPEGCodec	Decompresses lossless JPEG images.
class	LZOCodec	This class implements LZO decompression.
class	LZWCodec	This is an optimized LZW codec for use with TIFF files.
class	MJPBCodec	Methods for compressing and decompressing QuickTime Motion JPEG-B data.
class	MSRLECodec	Methods for compressing and decompressing data using Microsoft RLE.
class	MSVideoCodec	Methods for compressing and decompressing data using Microsoft Video 1.
class	NikonCodec	This class implements Nikon decompression.
class	PackbitsCodec	This class implements packbits decompression.
class	PassthroughCodec	A codec which just returns the exact data it was given, performing no compression or decompression.
class	QTRLECodec	Methods for compressing and decompressing data using QuickTime RLE.
class	RPZACodec	Implements encoding and decoding methods for Apple RPZA.
class	TargaRLECodec	This class implements Targa RLE decompression.
(package private) class	WrappedCodec	Generic wrapper for codecs from ome-codecs.
class	ZlibCodec	This class implements ZLIB decompression.
class	ZstdCodec

Methods in loci.formats.codec with parameters of type Codec

Modifier and Type	Method	Description
static CompressionType	CompressionType.get(Codec c)	Look up the compression type by Codec instance.

Uses of Codec in loci.formats.in

Fields in loci.formats.in declared as Codec

Modifier and Type	Field	Description
private Codec	ND2Reader.codec	Codec to use when decompressing pixel data.

Methods in loci.formats.in that return Codec

Modifier and Type	Method	Description
private Codec	ND2Reader.createCodec(boolean isJPEG)
private Codec	TissueFAXSReader.getCodec(int compression)
Codec	DicomReader.getTileCodec(int no)
private Codec	DicomReader.getTileCodec(DicomTile tile)	Get a Codec that can be used to decompress the given tile.
Codec	NDPIReader.getTileCodec(int no)
Codec	SVSReader.getTileCodec(int no)

Uses of Codec in loci.formats.out

Methods in loci.formats.out that return Codec

Modifier and Type	Method	Description
Codec	DicomWriter.getCodec()
Codec	TiffWriter.getCodec()

Uses of Codec in loci.formats.tiff

Fields in loci.formats.tiff declared as Codec

Modifier and Type	Field	Description
private Codec	TiffCompression.codec	TIFF compression codec.

Methods in loci.formats.tiff that return Codec

Modifier and Type	Method	Description
Codec	TiffCompression.getCodec()

Constructors in loci.formats.tiff with parameters of type Codec

Modifier	Constructor	Description
private	TiffCompression(int code, Codec codec, String codecName)	Default constructor.