loci.formats.in

Class TissueFAXSReader.ScanRegion

java.lang.Object

loci.formats.in.TissueFAXSReader.ScanRegion

Enclosing class:

TissueFAXSReader

class TissueFAXSReader.ScanRegion
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
java.util.List<TissueFAXSReader.Channel>	channels
java.lang.Integer	correctionImageCoreIndex
java.util.HashMap<java.lang.String,java.lang.Integer>	correctionImageIDs
java.lang.String	file
java.util.HashMap<java.lang.String,loci.common.Region>	fovs
int	fullResolutionCoreIndex
int	id
int	overlapX
int	overlapY
org.json.JSONObject	regionMetadata
java.util.List<java.lang.Integer>	resolutions
int	scaleFactor
int[]	tileRangeX
int[]	tileRangeY
int	tileSizeX
int	tileSizeY
int	timepoint
java.lang.Integer	tmaX
java.lang.Integer	tmaY
java.lang.Integer[]	zSteps

Constructor Summary

Constructors

Constructor and Description
ScanRegion()

Method Summary

Modifier and Type	Method and Description
void	parseJSON()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

file

public java.lang.String file

regionMetadata

public org.json.JSONObject regionMetadata

id

public int id

fullResolutionCoreIndex

public int fullResolutionCoreIndex

correctionImageCoreIndex

public java.lang.Integer correctionImageCoreIndex

resolutions

public java.util.List<java.lang.Integer> resolutions

tileSizeX

public int tileSizeX

tileSizeY

public int tileSizeY

overlapX

public int overlapX

overlapY

public int overlapY

scaleFactor

public int scaleFactor

tileRangeX

public int[] tileRangeX

tileRangeY

public int[] tileRangeY

zSteps

public java.lang.Integer[] zSteps

timepoint

public int timepoint

channels

public java.util.List<TissueFAXSReader.Channel> channels

fovs

public java.util.HashMap<java.lang.String,loci.common.Region> fovs

correctionImageIDs

public java.util.HashMap<java.lang.String,java.lang.Integer> correctionImageIDs

tmaX

public java.lang.Integer tmaX

tmaY

public java.lang.Integer tmaY

Constructor Detail

ScanRegion

ScanRegion()

Method Detail

parseJSON

public void parseJSON()