loci.formats.in

Class SlideBook7Reader.CCompressionBase

java.lang.Object

loci.formats.in.SlideBook7Reader.CCompressionBase

Enclosing class:

SlideBook7Reader

class SlideBook7Reader.CCompressionBase
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
static int	eCompressionJetRaw
static int	eCompressionLz4
static int	eCompressionNone
static int	eCompressionRLE
static int	eCompressionZlib
static int	eCompressionZstd
int	mAlgorythm
byte[]	mBlockDictionary
int	mBlockDictionarySize
long	mBufLenBY
long	mDataLenBY
long	mDataPosition
long	mDictionaryPosition
java.lang.Boolean	mDictionaryRead
java.lang.String	mErrorMessage
int	mNumberOfThreads
long	mNumBlocks
long	mNumX
long	mNumY
long	mNumZ
byte[]	mOutputBuffer
int	mUint16Size

Constructor Summary

Constructors

Constructor and Description
CCompressionBase()

Method Summary

Modifier and Type	Method and Description
long	convertToLong(byte[] bytes, int offset)
byte[]	DecompressBuffer(byte[] inBuffer)
long	GetDataOffsetForBlock(int inBlock)
long	GetDataSizeForBlock(int inBlock)
void	Initialize(long inDictionaryPosition, int inAlgorythm, int inNumX, int inNumY, int inNumZ, int inNumberOfThreads)
void	Initialize(long inDictionaryPosition, int inAlgorythm, int inNumX, int inNumY, int inNumZ, int inNumBlocks, int inNumberOfThreads)
byte[]	ReadData(loci.common.RandomAccessInputStream inStream, int inBlock)
void	ReadDictionary(loci.common.RandomAccessInputStream inStream)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

eCompressionNone

public static final int eCompressionNone

See Also:

Constant Field Values

eCompressionZstd

public static final int eCompressionZstd

See Also:

Constant Field Values

eCompressionZlib

public static final int eCompressionZlib

See Also:

Constant Field Values

eCompressionLz4

public static final int eCompressionLz4

See Also:

Constant Field Values

eCompressionJetRaw

public static final int eCompressionJetRaw

See Also:

Constant Field Values

eCompressionRLE

public static final int eCompressionRLE

See Also:

Constant Field Values

mErrorMessage

public java.lang.String mErrorMessage

mAlgorythm

public int mAlgorythm

mNumX

public long mNumX

mNumY

public long mNumY

mNumZ

public long mNumZ

mNumBlocks

public long mNumBlocks

mBufLenBY

public long mBufLenBY

mDataLenBY

public long mDataLenBY

mDictionaryRead

public java.lang.Boolean mDictionaryRead

mBlockDictionarySize

public int mBlockDictionarySize

mUint16Size

public int mUint16Size

mNumberOfThreads

public int mNumberOfThreads

mDictionaryPosition

public long mDictionaryPosition

mDataPosition

public long mDataPosition

mBlockDictionary

public byte[] mBlockDictionary

mOutputBuffer

public byte[] mOutputBuffer

Constructor Detail

CCompressionBase

CCompressionBase()

Method Detail

Initialize

public void Initialize(long inDictionaryPosition,
                       int inAlgorythm,
                       int inNumX,
                       int inNumY,
                       int inNumZ,
                       int inNumberOfThreads)

Initialize

public void Initialize(long inDictionaryPosition,
                       int inAlgorythm,
                       int inNumX,
                       int inNumY,
                       int inNumZ,
                       int inNumBlocks,
                       int inNumberOfThreads)

ReadDictionary

public void ReadDictionary(loci.common.RandomAccessInputStream inStream)
                    throws java.io.IOException

Throws:

java.io.IOException

convertToLong

public long convertToLong(byte[] bytes,
                          int offset)

GetDataOffsetForBlock

public long GetDataOffsetForBlock(int inBlock)

GetDataSizeForBlock

public long GetDataSizeForBlock(int inBlock)

DecompressBuffer

public byte[] DecompressBuffer(byte[] inBuffer)
                        throws FormatException,
                               java.io.IOException

Throws:

FormatException

java.io.IOException

ReadData

public byte[] ReadData(loci.common.RandomAccessInputStream inStream,
                       int inBlock)
                throws FormatException,
                       java.io.IOException

Throws:

FormatException

java.io.IOException