Uses of Interface
loci.formats.codec.Codec

Packages that use Codec

Package	Description
loci.formats	Bio-Formats: a library for reading and writing popular microscopy file formats.
loci.formats.codec
loci.formats.in	Package containing Bio-Formats file format readers.
loci.formats.out	Package containing Bio-Formats file format writers.
loci.formats.tiff	Package containing Bio-Formats TIFF code of general utility.

Uses of Codec in loci.formats

Methods in loci.formats that return Codec

Modifier and Type	Method and Description
Codec	WriterWrapper.getCodec()
Codec	ImageWriter.getCodec()
default Codec	ICompressedTileWriter.getCodec()
Codec	TileStitcher.getTileCodec(int no)
Codec	FileStitcher.getTileCodec(int no)
Codec	DimensionSwapper.getTileCodec(int no)
Codec	ChannelSeparator.getTileCodec(int no)
Codec	ChannelMerger.getTileCodec(int no)
Codec	ChannelFiller.getTileCodec(int no)
Codec	ReaderWrapper.getTileCodec(int no)
Codec	ImageReader.getTileCodec(int no)
default Codec	ICompressedTileReader.getTileCodec(int no) Retrieve a codec that can be used to decompress compressed tiles.

Uses of Codec in loci.formats.codec

Classes in loci.formats.codec that implement Codec

Modifier and Type	Class and Description
class	Base64Codec Implements encoding (compress) and decoding (decompress) methods for Base64.
class	BaseCodec BaseCodec contains default implementation and testing for classes implementing the Codec interface, and acts as a base class for any of the compression classes.
class	HuffmanCodec This class implements Huffman decoding.
class	JPEG2000Codec This class implements JPEG 2000 compression and decompression.
class	JPEGCodec This class implements JPEG compression and decompression.
class	JPEGXRCodec
class	LosslessJPEGCodec Decompresses lossless JPEG images.
class	LZOCodec This class implements LZO decompression.
class	LZWCodec This is an optimized LZW codec for use with TIFF files.
class	MJPBCodec Methods for compressing and decompressing QuickTime Motion JPEG-B data.
class	MSRLECodec Methods for compressing and decompressing data using Microsoft RLE.
class	MSVideoCodec Methods for compressing and decompressing data using Microsoft Video 1.
class	NikonCodec This class implements Nikon decompression.
class	PackbitsCodec This class implements packbits decompression.
class	PassthroughCodec A codec which just returns the exact data it was given, performing no compression or decompression.
class	QTRLECodec Methods for compressing and decompressing data using QuickTime RLE.
class	RPZACodec Implements encoding and decoding methods for Apple RPZA.
class	TargaRLECodec This class implements Targa RLE decompression.
(package private) class	WrappedCodec Generic wrapper for codecs from ome-codecs.
class	ZlibCodec This class implements ZLIB decompression.
class	ZstdCodec

Methods in loci.formats.codec with parameters of type Codec

Modifier and Type	Method and Description
static CompressionType	CompressionType.get(Codec c) Look up the compression type by Codec instance.

Uses of Codec in loci.formats.in

Fields in loci.formats.in declared as Codec

Modifier and Type	Field and Description
private Codec	ND2Reader.codec Codec to use when decompressing pixel data.

Methods in loci.formats.in that return Codec

Modifier and Type	Method and Description
private Codec	ND2Reader.createCodec(boolean isJPEG)
private Codec	DicomReader.getTileCodec(DicomTile tile) Get a Codec that can be used to decompress the given tile.
Codec	SVSReader.getTileCodec(int no)
Codec	NDPIReader.getTileCodec(int no)
Codec	DicomReader.getTileCodec(int no)

Uses of Codec in loci.formats.out

Methods in loci.formats.out that return Codec

Modifier and Type	Method and Description
Codec	TiffWriter.getCodec()
Codec	DicomWriter.getCodec()

Uses of Codec in loci.formats.tiff

Fields in loci.formats.tiff declared as Codec

Modifier and Type	Field and Description
private Codec	TiffCompression.codec TIFF compression codec.

Methods in loci.formats.tiff that return Codec

Modifier and Type	Method and Description
Codec	TiffCompression.getCodec()

Constructors in loci.formats.tiff with parameters of type Codec

Constructor and Description
TiffCompression(int code, Codec codec, java.lang.String codecName) Default constructor.