loci.formats.meta

Class OriginalMetadataAnnotation

java.lang.Object

ome.xml.model.AbstractOMEModelObject

ome.xml.model.Annotation

ome.xml.model.TextAnnotation

ome.xml.model.XMLAnnotation

loci.formats.meta.OriginalMetadataAnnotation

All Implemented Interfaces:

ome.xml.model.OMEModelObject

public class OriginalMetadataAnnotation
extends ome.xml.model.XMLAnnotation

Field Summary

Fields

Modifier and Type	Field and Description
private static javax.xml.parsers.DocumentBuilder	BUILDER
private java.lang.String	key
static java.lang.String	ORIGINAL_METADATA_NS
private java.lang.String	value

Fields inherited from class ome.xml.model.XMLAnnotation

NAMESPACE

Constructor Summary

Constructors

Constructor and Description
OriginalMetadataAnnotation()

Method Summary

Modifier and Type	Method and Description
java.lang.String	getKey()
java.lang.String	getValueForKey() Return just the value (i.e.
protected org.w3c.dom.Element	makeOriginalMetadata(org.w3c.dom.Document document) Create a DOM element for this annotation with the given document as the parent.
void	setKeyValue(java.lang.String key, java.lang.String value) Set the key/value metadata pair for this annotation.

Methods inherited from class ome.xml.model.XMLAnnotation

asXMLElement, asXMLElement, getStructuredAnnotations, getValue, link, setStructuredAnnotations, setValue, update

Methods inherited from class ome.xml.model.Annotation

copyLinkedAnnotationList, copyLinkedChannelList, copyLinkedDatasetList, copyLinkedDetectorList, copyLinkedDichroicList, copyLinkedExperimenterGroupList, copyLinkedExperimenterList, copyLinkedFilterList, copyLinkedFolderList, copyLinkedImageList, copyLinkedInstrumentList, copyLinkedLightPathList, copyLinkedLightSourceList, copyLinkedObjectiveList, copyLinkedPlaneList, copyLinkedPlateAcquisitionList, copyLinkedPlateList, copyLinkedProjectList, copyLinkedReagentList, copyLinkedROIList, copyLinkedScreenList, copyLinkedShapeList, copyLinkedWellList, getAnnotator, getDescription, getID, getLinkedAnnotation, getLinkedChannel, getLinkedDataset, getLinkedDetector, getLinkedDichroic, getLinkedExperimenter, getLinkedExperimenterGroup, getLinkedFilter, getLinkedFolder, getLinkedImage, getLinkedInstrument, getLinkedLightPath, getLinkedLightSource, getLinkedObjective, getLinkedPlane, getLinkedPlate, getLinkedPlateAcquisition, getLinkedProject, getLinkedReagent, getLinkedROI, getLinkedScreen, getLinkedShape, getLinkedWell, getNamespace, linkAnnotation, linkChannel, linkDataset, linkDetector, linkDichroic, linkExperimenter, linkExperimenterGroup, linkFilter, linkFolder, linkImage, linkInstrument, linkLightPath, linkLightSource, linkObjective, linkPlane, linkPlate, linkPlateAcquisition, linkProject, linkReagent, linkROI, linkScreen, linkShape, linkWell, setAnnotator, setDescription, setID, setLinkedAnnotation, setLinkedChannel, setLinkedDataset, setLinkedDetector, setLinkedDichroic, setLinkedExperimenter, setLinkedExperimenterGroup, setLinkedFilter, setLinkedFolder, setLinkedImage, setLinkedInstrument, setLinkedLightPath, setLinkedLightSource, setLinkedObjective, setLinkedPlane, setLinkedPlate, setLinkedPlateAcquisition, setLinkedProject, setLinkedReagent, setLinkedROI, setLinkedScreen, setLinkedShape, setLinkedWell, setNamespace, sizeOfLinkedAnnotationList, sizeOfLinkedChannelList, sizeOfLinkedDatasetList, sizeOfLinkedDetectorList, sizeOfLinkedDichroicList, sizeOfLinkedExperimenterGroupList, sizeOfLinkedExperimenterList, sizeOfLinkedFilterList, sizeOfLinkedFolderList, sizeOfLinkedImageList, sizeOfLinkedInstrumentList, sizeOfLinkedLightPathList, sizeOfLinkedLightSourceList, sizeOfLinkedObjectiveList, sizeOfLinkedPlaneList, sizeOfLinkedPlateAcquisitionList, sizeOfLinkedPlateList, sizeOfLinkedProjectList, sizeOfLinkedReagentList, sizeOfLinkedROIList, sizeOfLinkedScreenList, sizeOfLinkedShapeList, sizeOfLinkedWellList, unlinkAnnotation, unlinkChannel, unlinkDataset, unlinkDetector, unlinkDichroic, unlinkExperimenter, unlinkExperimenterGroup, unlinkFilter, unlinkFolder, unlinkImage, unlinkInstrument, unlinkLightPath, unlinkLightSource, unlinkObjective, unlinkPlane, unlinkPlate, unlinkPlateAcquisition, unlinkProject, unlinkReagent, unlinkROI, unlinkScreen, unlinkShape, unlinkWell

Methods inherited from class ome.xml.model.AbstractOMEModelObject

getChildrenByTagName, stripNamespacePrefix

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ORIGINAL_METADATA_NS

public static final java.lang.String ORIGINAL_METADATA_NS

BUILDER

private static final javax.xml.parsers.DocumentBuilder BUILDER

key

private java.lang.String key

value

private java.lang.String value

Constructor Detail

OriginalMetadataAnnotation

public OriginalMetadataAnnotation()

Method Detail

setKeyValue

public void setKeyValue(java.lang.String key,
                        java.lang.String value)

Set the key/value metadata pair for this annotation.

Parameters:

key - the original metadata key

value - the original metadata value

getKey

public java.lang.String getKey()

Returns:

the original metadata key

getValueForKey

public java.lang.String getValueForKey()

Return just the value (i.e. v in k=v) as opposed to the XML value which contains the entire block (e.g. <originalmetadata>...)

makeOriginalMetadata

protected org.w3c.dom.Element makeOriginalMetadata(org.w3c.dom.Document document)

Create a DOM element for this annotation with the given document as the parent.

Parameters:

document - the parent document for this annotation

Returns:

the DOM element corresponding to this annotation