loci.plugins.util

Class LociPrefs

java.lang.Object

loci.plugins.util.LociPrefs

public final class LociPrefs
extends java.lang.Object

Utility methods for ImageJ preferences for Bio-Formats plugins.

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	PREF_CELLSENS_FAIL
static java.lang.String	PREF_CZI_ATTACHMENT
static java.lang.String	PREF_CZI_AUTOSTITCH
static java.lang.String	PREF_LEICA_LIF_PHYSICAL_SIZE
static java.lang.String	PREF_ND2_CHUNKMAP
static java.lang.String	PREF_ND2_NIKON
static java.lang.String	PREF_PICT_QTJAVA
static java.lang.String	PREF_QT_QTJAVA
static java.lang.String	PREF_READER_ENABLED
static java.lang.String	PREF_READER_WINDOWLESS
static java.lang.String	PREF_SDT_INTENSITY
static java.lang.String	PREF_SLICE_LABEL_BASE_INDEX
static java.lang.String	PREF_SLICE_LABEL_PATTERN
static java.lang.String	PREF_TIFF_IMAGEIO

Constructor Summary

Constructors

Modifier	Constructor and Description
private	LociPrefs()

Method Summary

Modifier and Type	Method and Description
static boolean	allowCZIAutostitch()
private static boolean	getPref(java.lang.String pref, java.lang.Class<? extends IFormatReader> c, boolean defaultValue)
static int	getSliceLabelBaseIndex()
static java.lang.String	getSliceLabelPattern()
static boolean	includeCZIAttachments()
static boolean	isCellsensFailOnMissing()
static boolean	isLeicaLIFPhysicalSizeBackwardsCompatible()
static boolean	isND2Nikon()
static boolean	isPictQTJava()
static boolean	isQTQTJava()
static boolean	isReaderEnabled(java.lang.Class<? extends IFormatReader> c)
static boolean	isSDTIntensity()
static boolean	isTiffImageIO()
static boolean	isWindowless(IFormatReader r) Gets whether windowless mode should be used when opening this reader's currently initialized dataset.
static ImageReader	makeImageReader() Creates an image reader according to the current configuration settings, including which format readers are currently enabled, as well as format-specific configuration settings.
static boolean	useND2Chunkmap()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PREF_READER_ENABLED

public static final java.lang.String PREF_READER_ENABLED

See Also:

Constant Field Values

PREF_READER_WINDOWLESS

public static final java.lang.String PREF_READER_WINDOWLESS

See Also:

Constant Field Values

PREF_ND2_NIKON

public static final java.lang.String PREF_ND2_NIKON

See Also:

Constant Field Values

PREF_PICT_QTJAVA

public static final java.lang.String PREF_PICT_QTJAVA

See Also:

Constant Field Values

PREF_QT_QTJAVA

public static final java.lang.String PREF_QT_QTJAVA

See Also:

Constant Field Values

PREF_SDT_INTENSITY

public static final java.lang.String PREF_SDT_INTENSITY

See Also:

Constant Field Values

PREF_TIFF_IMAGEIO

public static final java.lang.String PREF_TIFF_IMAGEIO

See Also:

Constant Field Values

PREF_CZI_AUTOSTITCH

public static final java.lang.String PREF_CZI_AUTOSTITCH

See Also:

Constant Field Values

PREF_CZI_ATTACHMENT

public static final java.lang.String PREF_CZI_ATTACHMENT

See Also:

Constant Field Values

PREF_ND2_CHUNKMAP

public static final java.lang.String PREF_ND2_CHUNKMAP

See Also:

Constant Field Values

PREF_LEICA_LIF_PHYSICAL_SIZE

public static final java.lang.String PREF_LEICA_LIF_PHYSICAL_SIZE

See Also:

Constant Field Values

PREF_SLICE_LABEL_PATTERN

public static final java.lang.String PREF_SLICE_LABEL_PATTERN

See Also:

Constant Field Values

PREF_SLICE_LABEL_BASE_INDEX

public static final java.lang.String PREF_SLICE_LABEL_BASE_INDEX

See Also:

Constant Field Values

PREF_CELLSENS_FAIL

public static final java.lang.String PREF_CELLSENS_FAIL

See Also:

Constant Field Values

Constructor Detail

LociPrefs

private LociPrefs()

Method Detail

makeImageReader

public static ImageReader makeImageReader()

Creates an image reader according to the current configuration settings, including which format readers are currently enabled, as well as format-specific configuration settings.

isWindowless

public static boolean isWindowless(IFormatReader r)

Gets whether windowless mode should be used when opening this reader's currently initialized dataset.

isReaderEnabled

public static boolean isReaderEnabled(java.lang.Class<? extends IFormatReader> c)

isND2Nikon

public static boolean isND2Nikon()

isPictQTJava

public static boolean isPictQTJava()

isQTQTJava

public static boolean isQTQTJava()

isSDTIntensity

public static boolean isSDTIntensity()

isTiffImageIO

public static boolean isTiffImageIO()

allowCZIAutostitch

public static boolean allowCZIAutostitch()

includeCZIAttachments

public static boolean includeCZIAttachments()

useND2Chunkmap

public static boolean useND2Chunkmap()

isLeicaLIFPhysicalSizeBackwardsCompatible

public static boolean isLeicaLIFPhysicalSizeBackwardsCompatible()

getSliceLabelPattern

public static java.lang.String getSliceLabelPattern()

getSliceLabelBaseIndex

public static int getSliceLabelBaseIndex()

isCellsensFailOnMissing

public static boolean isCellsensFailOnMissing()

getPref

private static boolean getPref(java.lang.String pref,
                               java.lang.Class<? extends IFormatReader> c,
                               boolean defaultValue)