Uses of Class
loci.formats.CoreMetadata

Packages that use CoreMetadata

Package	Description
loci.formats	Bio-Formats: a library for reading and writing popular microscopy file formats.
loci.formats.in	Package containing Bio-Formats file format readers.
loci.formats.services
loci.formats.tools	Package containing utility methods corresponding to the Bio-Formats command line tools.

Uses of CoreMetadata in loci.formats

Subclasses of CoreMetadata in loci.formats

Modifier and Type	Class and Description
class	SwappableMetadata Extends CoreMetadata to include the notion of an "input order" for planes: the input order being the order planes are stored on disk.

Fields in loci.formats with type parameters of type CoreMetadata

Modifier and Type	Field and Description
private java.util.ArrayList<CoreMetadata>	FileStitcher.core Core metadata.
private java.util.List<CoreMetadata>	DimensionSwapper.core Core metadata associated with this dimension swapper.
protected java.util.List<CoreMetadata>	FormatReader.core Core metadata values.

Methods in loci.formats that return CoreMetadata

Modifier and Type	Method and Description
CoreMetadata	SwappableMetadata.clone(IFormatReader r, int coreIndex)
CoreMetadata	CoreMetadata.clone(IFormatReader r, int coreIndex)

Methods in loci.formats that return types with arguments of type CoreMetadata

Modifier and Type	Method and Description
java.util.List<CoreMetadata>	FileStitcher.getCoreMetadataList()
java.util.List<CoreMetadata>	DimensionSwapper.getCoreMetadataList()
java.util.List<CoreMetadata>	ReaderWrapper.getCoreMetadataList()
java.util.List<CoreMetadata>	ImageReader.getCoreMetadataList()
java.util.List<CoreMetadata>	IFormatReader.getCoreMetadataList() Obtains the core metadata values for the current file.
java.util.List<CoreMetadata>	FormatReader.getCoreMetadataList()

Methods in loci.formats with parameters of type CoreMetadata

Modifier and Type	Method and Description
static void	MetadataTools.populateMetadata(MetadataStore store, int series, java.lang.String imageName, CoreMetadata coreMeta) Populates the given MetadataStore, for the specified series, using the values from the provided CoreMetadata.

Constructors in loci.formats with parameters of type CoreMetadata

Constructor and Description
CoreMetadata(CoreMetadata c)

Uses of CoreMetadata in loci.formats.in

Fields in loci.formats.in declared as CoreMetadata

Modifier and Type	Field and Description
CoreMetadata	VolocityReader.Stack.core

Fields in loci.formats.in with type parameters of type CoreMetadata

Modifier and Type	Field and Description
private java.util.List<CoreMetadata>	ND2Handler.core
private java.util.List<CoreMetadata>	LeicaHandler.core

Methods in loci.formats.in that return types with arguments of type CoreMetadata

Modifier and Type	Method and Description
java.util.List<CoreMetadata>	ND2Handler.getCoreMetadataList()
java.util.List<CoreMetadata>	LeicaHandler.getCoreMetadataList()
java.util.List<CoreMetadata>	FilePatternReader.getCoreMetadataList()

Methods in loci.formats.in with parameters of type CoreMetadata

Modifier and Type	Method and Description
private void	ZeissCZIReader.convertPixelType(CoreMetadata ms0, int pixelType)

Constructor parameters in loci.formats.in with type arguments of type CoreMetadata

Constructor and Description
ND2Handler(java.util.List<CoreMetadata> core, boolean populateXY, int nImages)
ND2Handler(java.util.List<CoreMetadata> core, int nImages)

Uses of CoreMetadata in loci.formats.services

Methods in loci.formats.services with parameters of type CoreMetadata

Modifier and Type	Method and Description
void	OMEXMLServiceImpl.addModuloAlong(OMEXMLMetadata meta, CoreMetadata core, int imageIdx)
void	OMEXMLService.addModuloAlong(OMEXMLMetadata omexmlMeta, CoreMetadata core, int image) Adds ModuloAlong* annotations to the given OME-XML metadata object, using the given CoreMetadata object to determine modulo dimensions.

Uses of CoreMetadata in loci.formats.tools

Methods in loci.formats.tools with parameters of type CoreMetadata

Modifier and Type	Method and Description
private IMetadata	MakeTestOmeTiff.createMetadata(java.lang.String name, CoreMetadata info)
private java.awt.image.BufferedImage	MakeTestOmeTiff.createPlane(java.lang.String name, CoreMetadata info, int no)
private OMETiffWriter	MakeTestOmeTiff.createWriter(java.lang.String name, CoreMetadata info, java.lang.String id)
void	MakeTestOmeTiff.makeOmeTiff(java.lang.String name, CoreMetadata info)
private void	MakeTestOmeTiff.writeData(java.lang.String name, CoreMetadata info, java.lang.String id, OMETiffWriter out)