ZeissCZIReader.SubBlock (Bio-Formats API)

java.lang.Object
- loci.formats.in.ZeissCZIReader.Segment
- - loci.formats.in.ZeissCZIReader.SubBlock

Enclosing class:: ZeissCZIReader

class ZeissCZIReader.SubBlock
extends ZeissCZIReader.Segment

Segment with ID "ZISRAWSUBBLOCK".

Field Summary

Fields
Modifier and Type	Field and Description
`int`	`attachmentSize`
`int`	`col`
`int`	`coreIndex`
`private long`	`dataOffset`
`long`	`dataSize`
`ZeissCZIReader.DirectoryEntry`	`directoryEntry`
`private Double`	`exposureTime`
`String`	`metadata`
`int`	`metadataSize`
`int`	`pixelTypeIndex`
`int`	`planeIndex`
`int`	`resolutionIndex`
`int`	`row`
`private ome.units.quantity.Length`	`stageX`
`private ome.units.quantity.Length`	`stageY`
`private ome.units.quantity.Length`	`stageZ`
`private Double`	`timestamp`
`int`	`x`
`int`	`y`

Fields inherited from class loci.formats.in.ZeissCZIReader.Segment
allocatedSize, filename, id, startingPosition, stream, usedSize

Constructor Summary

Constructors
Constructor and Description

SubBlock()

SubBlock(ZeissCZIReader.SubBlock model)

Constructors
Constructor and Description
`SubBlock()`
`SubBlock(ZeissCZIReader.SubBlock model)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`fillInData()`
`private void`	`parseMetadata()`
`byte[]`	`readPixelData()`
`byte[]`	`readPixelData(loci.common.RandomAccessInputStream s)`
`String`	`toString()`

Methods inherited from class loci.formats.in.ZeissCZIReader.Segment
close, getStream

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

metadataSize
```
public int metadataSize
```

attachmentSize
```
public int attachmentSize
```

dataSize
```
public long dataSize
```

directoryEntry

public ZeissCZIReader.DirectoryEntry directoryEntry

metadata
```
public String metadata
```

coreIndex
```
public int coreIndex
```

resolutionIndex
```
public int resolutionIndex
```

planeIndex
```
public int planeIndex
```

pixelTypeIndex
```
public int pixelTypeIndex
```

dataOffset
```
private long dataOffset
```

stageX

private ome.units.quantity.Length stageX

stageY

private ome.units.quantity.Length stageY

stageZ

private ome.units.quantity.Length stageZ

timestamp
```
private Double timestamp
```

exposureTime
```
private Double exposureTime
```

x
```
public int x
```

y
```
public int y
```

row
```
public int row
```

col
```
public int col
```

Constructor Detail

SubBlock
```
public SubBlock()
```

SubBlock

public SubBlock(ZeissCZIReader.SubBlock model)

Method Detail

toString
```
public String toString()
```
Overrides:

toString in class Object

fillInData
```
public void fillInData()
                throws IOException
```
Overrides:

fillInData in class ZeissCZIReader.Segment

Throws:

IOException

readPixelData

public byte[] readPixelData()
                     throws FormatException,
                            IOException

Throws:: FormatException; IOException

readPixelData

public byte[] readPixelData(loci.common.RandomAccessInputStream s)
                     throws FormatException,
                            IOException

Throws:: FormatException; IOException

parseMetadata

private void parseMetadata()
                    throws IOException

Throws:: IOException

Class ZeissCZIReader.SubBlock

Field Summary

Fields inherited from class loci.formats.in.ZeissCZIReader.Segment

Constructor Summary

Method Summary

Methods inherited from class loci.formats.in.ZeissCZIReader.Segment

Methods inherited from class java.lang.Object

Field Detail

metadataSize

attachmentSize

dataSize

directoryEntry

metadata

coreIndex

resolutionIndex

planeIndex

pixelTypeIndex

dataOffset

stageX

stageY

stageZ

timestamp

exposureTime

x

y

row

col

Constructor Detail

SubBlock

SubBlock

Method Detail

toString

fillInData

readPixelData

readPixelData

parseMetadata