loci.formats.in

Class AmiraReader.HxZip

java.lang.Object

loci.formats.in.AmiraReader.HxZip

All Implemented Interfaces:

AmiraReader.PlaneReader

Enclosing class:

AmiraReader

 class AmiraReader.HxZip
extends Object
implements AmiraReader.PlaneReader

This is the reader for GZip-compressed AmiraMeshes. As such files contain a single GZipped stream for the complete stack, we cannot really access the slices randomly, but have to decompress instead of seeking.

Field Summary

Fields

Modifier and Type	Field and Description
(package private) long	compressedSize
(package private) int	currentNo
(package private) InflaterInputStream	decompressor
(package private) long	offsetOfStream
(package private) int	planeSize

Constructor Summary

Constructors

Constructor and Description
AmiraReader.HxZip(long compressedSize)

Method Summary

Methods

Modifier and Type	Method and Description
(package private) void	initDecompressor()
byte[]	read(int no, byte[] buf)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

offsetOfStream

long offsetOfStream

compressedSize

long compressedSize

currentNo

int currentNo

planeSize

int planeSize

decompressor

transient InflaterInputStream decompressor

Constructor Detail

AmiraReader.HxZip

AmiraReader.HxZip(long compressedSize)

Method Detail

initDecompressor

void initDecompressor()
                throws IOException

Throws:

IOException

read

public byte[] read(int no,
          byte[] buf)
            throws FormatException,
                   IOException

Specified by:

read in interface AmiraReader.PlaneReader

Throws:

FormatException

IOException