Uses of Class
loci.common.Location

Packages that use Location

Package	Description
loci.common
loci.formats	Bio-Formats: a library for reading and writing popular microscopy file formats.
loci.formats.in	Package containing Bio-Formats file format readers.
loci.formats.tools	Package containing utility methods corresponding to the Bio-Formats command line tools.
loci.plugins.in	Bio-Formats Importer plugin for ImageJ.

Uses of Location in loci.common

Subclasses of Location in loci.common

Modifier and Type	Class and Description
class	CaseInsensitiveLocation Case insensitive variant of Location.

Methods in loci.common that return Location

Modifier and Type	Method and Description
Location	Location.getAbsoluteFile()
Location	Location.getCanonicalFile()
Location	Location.getParentFile()
Location[]	Location.listFiles() Return a list of absolute files in this directory.
Location	CaseInsensitiveLocation.Cache.lookup(Location name) Look up a filename in the cache.

Methods in loci.common with parameters of type Location

Modifier and Type	Method and Description
private HashMap<String,String>	CaseInsensitiveLocation.Cache.fill(Location dir) Fill the cache with the content for the specified directory.
private static String	CaseInsensitiveLocation.findCaseInsensitive(Location name)
void	CaseInsensitiveLocation.Cache.invalidate(Location dir) Remove a directory from the cache.
Location	CaseInsensitiveLocation.Cache.lookup(Location name) Look up a filename in the cache.

Constructors in loci.common with parameters of type Location

Constructor and Description
CaseInsensitiveLocation(Location file)
Location(Location parent, String child)

Uses of Location in loci.formats

Fields in loci.formats declared as Location

Modifier and Type	Field and Description
private Location	Memoizer.realFile

Methods in loci.formats that return Location

Modifier and Type	Method and Description
Location	ResourceNamer.getLocationFromResourceName(Location resourceParentPath, String resourceName, int nameIndex, String resourceExtension) Creates a new Location instance using the provided parent path and child node name.

Methods in loci.formats with parameters of type Location

Modifier and Type	Method and Description
static String	FilePattern.findPattern(Location file) Identifies the group pattern from a given file within that group.
Location	ResourceNamer.getLocationFromResourceName(Location resourceParentPath, String resourceName, int nameIndex, String resourceExtension) Creates a new Location instance using the provided parent path and child node name.

Constructors in loci.formats with parameters of type Location

Constructor and Description
FilePattern(Location file) Creates a pattern object using the given file as a template.

Uses of Location in loci.formats.in

Fields in loci.formats.in declared as Location

Modifier and Type	Field and Description
private Location	PrairieReader.cfgFile The associated XML files.
private Location	VolocityReader.dir
private Location	PrairieReader.envFile The associated XML files.
private Location	CellVoyagerReader.measurementFolder
private Location	CellVoyagerReader.measurementResultFile
private Location	CellVoyagerReader.omeMeasurementFile
private Location	PrairieReader.xmlFile The associated XML files.

Methods in loci.formats.in that return Location

Modifier and Type	Method and Description
private Location	PrairieReader.find(String[] suffix) Finds the first file with one of the given suffixes.

Methods in loci.formats.in with parameters of type Location

Modifier and Type	Method and Description
private String[]	FlexReader.findFiles(Location baseFile) Search for files that correspond to the given file.
private String[]	FlexReader.findFiles(Location baseFile, String[] suffixes)
private String	VolocityReader.getFile(Integer parent, Location dir)
private String	MetamorphReader.getRealSTKFile(Location l) Check that the given STK file exists.
private boolean	ScreenReader.hasValidWells(Location plate)
private void	BDReader.parseChannelData(Location dir)
private Document	PrairieReader.parseDOM(Location file) Parses a Document from the data in the given file.
private void	DicomReader.scanDirectory(Location dir, boolean checkSeries) Scan the given directory for files that belong to this dataset.

Uses of Location in loci.formats.tools

Fields in loci.formats.tools declared as Location

Modifier and Type	Field and Description
private Location	FakeImage.directoryRoot

Methods in loci.formats.tools that return Location

Modifier and Type	Method and Description
Location	FakeImage.generateScreen(int plates, int plateAcquisitions, int rows, int columns, int fields) Creates a fake SPW file/directory structure.

Constructors in loci.formats.tools with parameters of type Location

Constructor and Description
FakeImage(Location directoryRoot)

Uses of Location in loci.plugins.in

Fields in loci.plugins.in declared as Location

Modifier and Type	Field and Description
protected Location	ImportProcess.idLoc

Methods in loci.plugins.in that return Location

Modifier and Type	Method and Description
Location	ImportProcess.getIdLocation() Valid only after ImportStep.READER.