Configuration (Bio-Formats API)

java.lang.Object
- loci.tests.testng.Configuration

public class Configuration
extends Object

Source code:: Trac, Gitweb

Field Summary

Fields
Modifier and Type Field and Description

static int TILE_SIZE

Fields
Modifier and Type	Field and Description
`static int`	`TILE_SIZE`

Constructor Summary

Constructors
Constructor and Description

Configuration(IFormatReader reader, String configFile)

Configuration(String dataFile, String configFile)

Constructors
Constructor and Description
`Configuration(IFormatReader reader, String configFile)`
`Configuration(String dataFile, String configFile)`

Method Summary

Methods
Modifier and Type	Method and Description
`boolean`	`doTest()`
`boolean`	`equals(Object o)`
`long`	`getAccessTimeMillis()`
`String`	`getAlternateMD5()`
`int`	`getChannelCount()`
`String`	`getChannelName(int channel)`
`String`	`getDate()`
`String`	`getDetector(int channel)`
`String`	`getDimensionOrder()`
`Integer`	`getEmissionWavelength(int channel)`
`Integer`	`getExcitationWavelength(int channel)`
`Double`	`getExposureTime(int channel)`
`String`	`getFile()`
`String`	`getImageDescription()`
`String`	`getImageName()`
`IniList`	`getINI()`
`String`	`getLightSource(int channel)`
`String`	`getMD5()`
`int`	`getMemory()`
`Double`	`getPhysicalSizeX()`
`Double`	`getPhysicalSizeY()`
`Double`	`getPhysicalSizeZ()`
`String`	`getPixelType()`
`String`	`getReader()`
`int`	`getSeriesCount()`
`int`	`getSizeC()`
`int`	`getSizeT()`
`int`	`getSizeX()`
`int`	`getSizeY()`
`int`	`getSizeZ()`
`int`	`getThumbSizeX()`
`int`	`getThumbSizeY()`
`String`	`getTileAlternateMD5()`
`String`	`getTileMD5()`
`Double`	`getTimeIncrement()`
`boolean`	`hasExposureTime(int channel)`
`int`	`hashCode()`
`boolean`	`hasImageDescription()`
`boolean`	`isFalseColor()`
`boolean`	`isIndexed()`
`boolean`	`isInterleaved()`
`boolean`	`isLittleEndian()`
`boolean`	`isRGB()`
`void`	`saveToFile()`
`void`	`setSeries(int series)`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Field Detail
- TILE_SIZE
```
public static final int TILE_SIZE
```
  See Also:
  Constant Field Values

Constructor Detail

Configuration

public Configuration(String dataFile,
             String configFile)
              throws IOException

Throws:: IOException

Configuration

public Configuration(IFormatReader reader,
             String configFile)

Method Detail

getFile
```
public String getFile()
```

getAccessTimeMillis
```
public long getAccessTimeMillis()
```

getMemory
```
public int getMemory()
```

doTest
```
public boolean doTest()
```

getReader
```
public String getReader()
```

getSeriesCount
```
public int getSeriesCount()
```

getSizeX
```
public int getSizeX()
```

getSizeY
```
public int getSizeY()
```

getSizeZ
```
public int getSizeZ()
```

getSizeC
```
public int getSizeC()
```

getSizeT
```
public int getSizeT()
```

getDimensionOrder
```
public String getDimensionOrder()
```

isInterleaved
```
public boolean isInterleaved()
```

isIndexed
```
public boolean isIndexed()
```

isFalseColor
```
public boolean isFalseColor()
```

isRGB
```
public boolean isRGB()
```

getThumbSizeX
```
public int getThumbSizeX()
```

getThumbSizeY
```
public int getThumbSizeY()
```

getPixelType
```
public String getPixelType()
```

isLittleEndian
```
public boolean isLittleEndian()
```

getMD5
```
public String getMD5()
```

getAlternateMD5
```
public String getAlternateMD5()
```

getTileMD5
```
public String getTileMD5()
```

getTileAlternateMD5
```
public String getTileAlternateMD5()
```

getPhysicalSizeX
```
public Double getPhysicalSizeX()
```

getPhysicalSizeY
```
public Double getPhysicalSizeY()
```

getPhysicalSizeZ
```
public Double getPhysicalSizeZ()
```

getTimeIncrement
```
public Double getTimeIncrement()
```

getChannelCount
```
public int getChannelCount()
```

getLightSource

public String getLightSource(int channel)

getChannelName

public String getChannelName(int channel)

hasExposureTime

public boolean hasExposureTime(int channel)

getExposureTime

public Double getExposureTime(int channel)

getEmissionWavelength

public Integer getEmissionWavelength(int channel)

getExcitationWavelength

public Integer getExcitationWavelength(int channel)

getDetector

public String getDetector(int channel)

getImageName
```
public String getImageName()
```

hasImageDescription
```
public boolean hasImageDescription()
```

getImageDescription
```
public String getImageDescription()
```

getDate
```
public String getDate()
```

setSeries
```
public void setSeries(int series)
```

saveToFile

public void saveToFile()
                throws IOException

Throws:: IOException

getINI
```
public IniList getINI()
```

equals
```
public boolean equals(Object o)
```
Overrides:

equals in class Object

hashCode
```
public int hashCode()
```
Overrides:

hashCode in class Object

Class Configuration

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

TILE_SIZE

Constructor Detail

Configuration

Configuration

Method Detail

getFile

getAccessTimeMillis

getMemory

doTest

getReader

getSeriesCount

getSizeX

getSizeY

getSizeZ

getSizeC

getSizeT

getDimensionOrder

isInterleaved

isIndexed

isFalseColor

isRGB

getThumbSizeX

getThumbSizeY

getPixelType

isLittleEndian

getMD5

getAlternateMD5

getTileMD5

getTileAlternateMD5

getPhysicalSizeX

getPhysicalSizeY

getPhysicalSizeZ

getTimeIncrement

getChannelCount

getLightSource

getChannelName

hasExposureTime

getExposureTime

getEmissionWavelength

getExcitationWavelength

getDetector

getImageName

hasImageDescription

getImageDescription

getDate

setSeries

saveToFile

getINI

equals

hashCode