bioformats  5.1.8
TIFF.h
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37 
38 #ifndef OME_BIOFORMATS_TIFF_TIFF_H
39 #define OME_BIOFORMATS_TIFF_TIFF_H
40 
41 #include <string>
42 
43 #include <boost/iterator/iterator_facade.hpp>
44 
45 #include <ome/bioformats/tiff/Types.h>
46 
47 #include <ome/common/filesystem.h>
48 
49 #include <ome/compat/cstdint.h>
50 #include <ome/compat/memory.h>
51 
52 namespace ome
53 {
54  namespace bioformats
55  {
59  namespace tiff
60  {
61 
62  class IFD;
63 
67  template<typename Value>
68  class IFDIterator : public boost::iterator_facade<IFDIterator<Value>,
69  ome::compat::shared_ptr<Value>,
70  boost::forward_traversal_tag>
71  {
72  public:
79  pos()
80  {}
81 
89  IFDIterator(ome::compat::shared_ptr<IFD>& ifd):
90  pos(ifd)
91  {}
92 
98  template <class OtherValue>
100  : pos(rhs.pos) {}
101 
102  private:
109  mutable ome::compat::shared_ptr<Value> pos;
110 
111  friend class boost::iterator_core_access;
112  template <class> friend class IFDIterator;
113 
121  void
122  increment();
123 
130  bool
131  equal(IFDIterator const& rhs) const
132  {
133  return this->pos == rhs.pos;
134  }
135 
141  ome::compat::shared_ptr<Value>&
142  dereference() const
143  {
144  return pos;
145  }
146  };
147 
156  class TIFF : public ome::compat::enable_shared_from_this<TIFF>
157  {
158  private:
159  class Impl;
160  class wrapped_type;
162  ome::compat::shared_ptr<Impl> impl;
163 
164  protected:
166  TIFF(const boost::filesystem::path& filename,
167  const std::string& mode);
168 
169  private:
171  TIFF (const TIFF&);
172 
174  TIFF&
175  operator= (const TIFF&);
176 
177  public:
179  ~TIFF();
180 
193  static ome::compat::shared_ptr<TIFF>
194  open(const boost::filesystem::path& filename,
195  const std::string& mode);
196 
204  void
205  close();
206 
213  operator bool ();
214 
221  directoryCount() const;
222 
231  ome::compat::shared_ptr<IFD>
233 
242  ome::compat::shared_ptr<IFD>
243  getDirectoryByOffset(offset_type offset) const;
244 
251  ome::compat::shared_ptr<IFD>
252  getCurrentDirectory() const;
253 
262  void
264 
284  wrapped_type *
285  getWrapped() const;
286 
287  friend class IFD;
288 
293 
299  iterator
300  begin();
301 
307  const_iterator
308  begin() const;
309 
315  iterator
316  end();
317 
323  const_iterator
324  end() const;
325 
326  private:
328  void
330  };
331 
332  }
333  }
334 }
335 
336 #endif // OME_BIOFORMATS_TIFF_TIFF_H
337 
338 /*
339  * Local Variables:
340  * mode:C++
341  * End:
342  */
IFDIterator(ome::compat::shared_ptr< IFD > &ifd)
Construct with an initial starting position.
Definition: TIFF.h:89
Memory type substitution.
uint16_t directory_index_type
IFD index.
Definition: Types.h:53
directory_index_type directoryCount() const
Get the total number of IFDs.
Definition: TIFF.cpp:239
ome::compat::shared_ptr< IFD > getDirectoryByIndex(directory_index_type index) const
Get an IFD by its index.
Definition: TIFF.cpp:253
ome::compat::shared_ptr< Impl > impl
Private implementation details.
Definition: TIFF.h:160
IFDIterator< const IFD > const_iterator
const IFD iterator.
Definition: TIFF.h:292
iterator begin()
Get the first image file directory.
Definition: TIFF.cpp:301
void registerImageJTags()
Register ImageJ tags with libtiff for this image.
Definition: TIFF.cpp:327
~TIFF()
Destructor.
Definition: TIFF.cpp:199
wrapped_type * getWrapped() const
Get the underlying libtiff ::TIFF instance.
Definition: TIFF.cpp:204
bool equal(IFDIterator const &rhs) const
Check for equality.
Definition: TIFF.h:131
iterator end()
Get the last+1 image file directory.
Definition: TIFF.cpp:315
Boost.Filesystem compatibility.
IFDIterator()
Default constructor.
Definition: TIFF.h:78
uint64_t offset_type
IFD offset.
Definition: Types.h:56
Open Microscopy Environment C++ implementation.
Definition: CoreMetadata.cpp:40
Iterator for IFDs contained within a TIFF.
Definition: TIFF.h:68
ome::compat::shared_ptr< Value > & dereference() const
Dereference the iterator.
Definition: TIFF.h:142
Tagged Image File Format (TIFF).
Definition: TIFF.h:156
Internal implementation details of TIFF.
Definition: TIFF.cpp:109
TIFF(const boost::filesystem::path &filename, const std::string &mode)
Constructor (non-public).
Definition: TIFF.cpp:192
TIFF & operator=(const TIFF &)
Assignment operator (deleted).
ome::compat::shared_ptr< Value > pos
The current position.
Definition: TIFF.h:109
IFDIterator(const IFDIterator< OtherValue > &rhs)
Construct from an existing iterator.
Definition: TIFF.h:99
Standard integer types.
ome::compat::shared_ptr< IFD > getCurrentDirectory() const
Get the currently active IFD.
Definition: TIFF.cpp:282
static ome::compat::shared_ptr< TIFF > open(const boost::filesystem::path &filename, const std::string &mode)
Open a TIFF file for reading or writing.
Definition: TIFF.cpp:210
void writeCurrentDirectory()
Write the currently active IFD.
Definition: TIFF.cpp:289
void increment()
Increment the iterator by one position.
IFDIterator< IFD > iterator
IFD iterator.
Definition: TIFF.h:290
Image File Directory (IFD).
Definition: IFD.h:71
ome::compat::shared_ptr< IFD > getDirectoryByOffset(offset_type offset) const
Get an IFD by its offset in the file.
Definition: TIFF.cpp:265
void close()
Close the TIFF file.
Definition: TIFF.cpp:228