Plate.h

/*
 * #%L
 * OME-XML C++ library for working with OME-XML metadata structures.
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 * Copyright © 2006 - 2015 Open Microscopy Environment:
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 *   - National Institutes of Health
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/*─────────────────────────────────────────────────────────────────────────────
 *
 * THIS IS AUTOMATICALLY GENERATED CODE.  DO NOT MODIFY.
 *
 *─────────────────────────────────────────────────────────────────────────────
 */

#ifndef OME_XML_MODEL_PLATE_H
#define OME_XML_MODEL_PLATE_H

#include <algorithm>
#include <list>
#include <stdexcept>
#include <string>
#include <vector>

#include <ome/common/log.h>

#include <ome/common/xml/dom/Document.h>
#include <ome/common/xml/dom/Element.h>
#include <ome/common/xml/dom/Node.h>
#include <ome/common/xml/dom/NodeList.h>

#include <ome/xml/model/detail/OMEModelObject.h>
#include <ome/xml/model/enums/NamingConvention.h>
#include <ome/xml/model/primitives/NonNegativeInteger.h>
#include <ome/xml/model/primitives/PositiveInteger.h>

namespace ome
{
  namespace xml
  {
    namespace model
    {

      // Forward declarations.
      class Annotation;
      class OMEModel;
      class PlateAcquisition;
      class Screen;
      class Well;

      class Plate : public detail::OMEModelObject
      {
      private:
        ome::compat::shared_ptr<std::string> status;
        ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger> rows;
        ome::compat::shared_ptr<std::string> externalIdentifier;
        ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention> rowNamingConvention;
        ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention> columnNamingConvention;
        ome::compat::shared_ptr<ome::xml::model::primitives::NonNegativeInteger> fieldIndex;
        ome::compat::shared_ptr<double> wellOriginY;
        ome::compat::shared_ptr<double> wellOriginX;
        std::string id;
        ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger> columns;
        ome::compat::shared_ptr<std::string> name;
        ome::compat::shared_ptr<std::string> description;
        std::vector<ome::compat::shared_ptr<ome::xml::model::Well> > wells;
        OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type annotationLinks;
        std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> > plateAcquisitions;
        OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type screenLinks;

      public:
        Plate ();

        Plate (const Plate& copy);

        virtual
        ~Plate ();



        static ome::compat::shared_ptr< Plate>
        create(const common::xml::dom::Element& element,
               ome::xml::model::OMEModel& model);

        // Documented in superclass.
        const std::string&
        elementName() const;

        // Documented in superclass.
        bool
        validElementName(const std::string& name) const;


        // -- OMEModelObject API methods --

        virtual void
        update(const common::xml::dom::Element&  element,
               ome::xml::model::OMEModel& model);

      public:
        // -- Plate API methods --

        bool
        link (ome::compat::shared_ptr<Reference>& reference,
              ome::compat::shared_ptr< ome::xml::model::OMEModelObject>& object);

        ome::compat::shared_ptr<std::string>
        getStatus ();

        const ome::compat::shared_ptr<std::string>
        getStatus () const;

        void
        setStatus (ome::compat::shared_ptr<std::string>& status);

        ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
        getRows ();

        const ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
        getRows () const;

        void
        setRows (ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>& rows);

        ome::compat::shared_ptr<std::string>
        getExternalIdentifier ();

        const ome::compat::shared_ptr<std::string>
        getExternalIdentifier () const;

        void
        setExternalIdentifier (ome::compat::shared_ptr<std::string>& externalIdentifier);

        ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention>
        getRowNamingConvention ();

        const ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention>
        getRowNamingConvention () const;

        void
        setRowNamingConvention (ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention>& rowNamingConvention);

        ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention>
        getColumnNamingConvention ();

        const ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention>
        getColumnNamingConvention () const;

        void
        setColumnNamingConvention (ome::compat::shared_ptr<ome::xml::model::enums::NamingConvention>& columnNamingConvention);

        ome::compat::shared_ptr<ome::xml::model::primitives::NonNegativeInteger>
        getFieldIndex ();

        const ome::compat::shared_ptr<ome::xml::model::primitives::NonNegativeInteger>
        getFieldIndex () const;

        void
        setFieldIndex (ome::compat::shared_ptr<ome::xml::model::primitives::NonNegativeInteger>& fieldIndex);

        ome::compat::shared_ptr<double>
        getWellOriginY ();

        const ome::compat::shared_ptr<double>
        getWellOriginY () const;

        void
        setWellOriginY (ome::compat::shared_ptr<double>& wellOriginY);

        ome::compat::shared_ptr<double>
        getWellOriginX ();

        const ome::compat::shared_ptr<double>
        getWellOriginX () const;

        void
        setWellOriginX (ome::compat::shared_ptr<double>& wellOriginX);

        const std::string&
        getID () const;

        void
        setID (const std::string& id);

        ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
        getColumns ();

        const ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>
        getColumns () const;

        void
        setColumns (ome::compat::shared_ptr<ome::xml::model::primitives::PositiveInteger>& columns);

        ome::compat::shared_ptr<std::string>
        getName ();

        const ome::compat::shared_ptr<std::string>
        getName () const;

        void
        setName (ome::compat::shared_ptr<std::string>& name);

        ome::compat::shared_ptr<std::string>
        getDescription ();

        const ome::compat::shared_ptr<std::string>
        getDescription () const;

        void
        setDescription (ome::compat::shared_ptr<std::string>& description);

        std::vector<ome::compat::shared_ptr<ome::xml::model::Well> >::size_type
        sizeOfWellList () const;

        std::vector<ome::compat::shared_ptr<ome::xml::model::Well> >&
        getWellList ();

        const std::vector<ome::compat::shared_ptr<ome::xml::model::Well> >&
        getWellList () const;

        ome::compat::shared_ptr<ome::xml::model::Well>&
        getWell (std::vector<ome::compat::shared_ptr<ome::xml::model::Well> >::size_type index);

        const ome::compat::shared_ptr<ome::xml::model::Well>&
        getWell (std::vector<ome::compat::shared_ptr<ome::xml::model::Well> >::size_type index) const;

        void
        setWell (std::vector<ome::compat::shared_ptr<ome::xml::model::Well> >::size_type index,
                               ome::compat::shared_ptr<ome::xml::model::Well>& well);

        void
        addWell (ome::compat::shared_ptr<ome::xml::model::Well>& well);

        void
        removeWell (ome::compat::shared_ptr<ome::xml::model::Well>& well);

        OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type::size_type
        sizeOfLinkedAnnotationList () const;

        OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type
        getLinkedAnnotationList () const;

        const ome::compat::weak_ptr<ome::xml::model::Annotation>&
        getLinkedAnnotation (OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type::size_type index) const;

        const ome::compat::weak_ptr<ome::xml::model::Annotation>&
        setLinkedAnnotation (OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type::size_type index,
                                     const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);

        bool
        linkAnnotation (const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);

        bool
        unlinkAnnotation (const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);

        std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> >::size_type
        sizeOfPlateAcquisitionList () const;

        std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> >&
        getPlateAcquisitionList ();

        const std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> >&
        getPlateAcquisitionList () const;

        ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>&
        getPlateAcquisition (std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> >::size_type index);

        const ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>&
        getPlateAcquisition (std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> >::size_type index) const;

        void
        setPlateAcquisition (std::vector<ome::compat::shared_ptr<ome::xml::model::PlateAcquisition> >::size_type index,
                               ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>& plateAcquisition);

        void
        addPlateAcquisition (ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>& plateAcquisition);

        void
        removePlateAcquisition (ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>& plateAcquisition);

        OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type::size_type
        sizeOfLinkedScreenList () const;

        OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type
        getLinkedScreenList () const;

        const ome::compat::weak_ptr<ome::xml::model::Screen>&
        getLinkedScreen (OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type::size_type index) const;

        const ome::compat::weak_ptr<ome::xml::model::Screen>&
        setLinkedScreen (OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type::size_type index,
                                     const ome::compat::shared_ptr<ome::xml::model::Screen>& screen_BackReference);

        bool
        linkScreen (const ome::compat::shared_ptr<ome::xml::model::Screen>& screen_BackReference);

        bool
        unlinkScreen (const ome::compat::shared_ptr<ome::xml::model::Screen>& screen_BackReference);


        virtual common::xml::dom::Element
        asXMLElement (common::xml::dom::Document& document) const;


      protected:
        // Documented in base class.
        virtual common::xml::dom::Element
        asXMLElementInternal (common::xml::dom::Document& document,
                              common::xml::dom::Element&  element) const;

      public:
       // Documented in superclass.
       const std::string&
       getXMLNamespace() const;
      };

    }
  }
}

#endif // OME_XML_MODEL_PLATE_H

/*
 * Local Variables:
 * mode:C++
 * End:
 */