5.1.3/api/Annotation_8h_source.html

 /*

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  * OME-XML C++ library for working with OME-XML metadata structures.

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 #ifndef OME_XML_MODEL_ANNOTATION_H

 #define OME_XML_MODEL_ANNOTATION_H


 #include <algorithm>

 #include <list>

 #include <stdexcept>

 #include <string>

 #include <vector>


 #include <ome/common/log.h>


 #include <ome/common/xml/dom/Document.h>

 #include <ome/common/xml/dom/Element.h>

 #include <ome/common/xml/dom/Node.h>

 #include <ome/common/xml/dom/NodeList.h>


 #include <ome/xml/model/detail/OMEModelObject.h>


 namespace ome

 {

   namespace xml

   {

     namespace model

     {


       // Forward declarations.

       class Channel;

       class Dataset;

       class Experimenter;

       class ExperimenterGroup;

       class Image;

       class OMEModel;

       class Pixels;

       class Plane;

       class Plate;

       class PlateAcquisition;

       class Project;

       class ROI;

       class Reagent;

       class Screen;

       class Well;

       class WellSample;


       class Annotation : public detail::OMEModelObject

       {

       private:

         ome::compat::shared_ptr<std::string> namespace_;

         std::string id;

         ome::compat::shared_ptr<std::string> annotator;

         ome::compat::shared_ptr<std::string> description;

         OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type annotationLinks;

         OMEModelObject::indexed_container<ome::xml::model::Image, ome::compat::weak_ptr>::type imageLinks;

         OMEModelObject::indexed_container<ome::xml::model::Pixels, ome::compat::weak_ptr>::type pixelsLinks;

         OMEModelObject::indexed_container<ome::xml::model::Plane, ome::compat::weak_ptr>::type planeLinks;

         OMEModelObject::indexed_container<ome::xml::model::Channel, ome::compat::weak_ptr>::type channelLinks;

         OMEModelObject::indexed_container<ome::xml::model::Project, ome::compat::weak_ptr>::type projectLinks;

         OMEModelObject::indexed_container<ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr>::type experimenterGroupLinks;

         OMEModelObject::indexed_container<ome::xml::model::Dataset, ome::compat::weak_ptr>::type datasetLinks;

         OMEModelObject::indexed_container<ome::xml::model::Experimenter, ome::compat::weak_ptr>::type experimenterLinks;

         OMEModelObject::indexed_container<ome::xml::model::ROI, ome::compat::weak_ptr>::type roiLinks;

         OMEModelObject::indexed_container<ome::xml::model::Plate, ome::compat::weak_ptr>::type plateLinks;

         OMEModelObject::indexed_container<ome::xml::model::Reagent, ome::compat::weak_ptr>::type reagentLinks;

         OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type screenLinks;

         OMEModelObject::indexed_container<ome::xml::model::PlateAcquisition, ome::compat::weak_ptr>::type plateAcquisitionLinks;

         OMEModelObject::indexed_container<ome::xml::model::Well, ome::compat::weak_ptr>::type wellLinks;

         OMEModelObject::indexed_container<ome::xml::model::WellSample, ome::compat::weak_ptr>::type wellSampleLinks;


       public:

         Annotation ();


         Annotation (const Annotation& copy);


         virtual

         ~Annotation ();


         // Documented in superclass.

         bool

         validElementName(const std::string& name) const;


         // -- OMEModelObject API methods --


         virtual void

         update(const common::xml::dom::Element&  element,

                ome::xml::model::OMEModel& model);


       public:

         // -- Annotation API methods --


         bool

         link (ome::compat::shared_ptr<Reference>& reference,

               ome::compat::shared_ptr< ome::xml::model::OMEModelObject>& object);


         ome::compat::shared_ptr<std::string>

         getNamespace ();


         const ome::compat::shared_ptr<std::string>

         getNamespace () const;


         void

         setNamespace (ome::compat::shared_ptr<std::string>& namespace_);


         const std::string&

         getID () const;


         void

         setID (const std::string& id);


         ome::compat::shared_ptr<std::string>

         getAnnotator ();


         const ome::compat::shared_ptr<std::string>

         getAnnotator () const;


         void

         setAnnotator (ome::compat::shared_ptr<std::string>& annotator);


         ome::compat::shared_ptr<std::string>

         getDescription ();


         const ome::compat::shared_ptr<std::string>

         getDescription () const;


         void

         setDescription (ome::compat::shared_ptr<std::string>& description);


         OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedAnnotationList () const;


         OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type

         getLinkedAnnotationList () const;


         const ome::compat::weak_ptr<ome::xml::model::Annotation>&

         getLinkedAnnotation (OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Annotation>&

         setLinkedAnnotation (OMEModelObject::indexed_container<ome::xml::model::Annotation, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);


         bool

         linkAnnotation (const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);


         bool

         unlinkAnnotation (const ome::compat::shared_ptr<ome::xml::model::Annotation>& annotation);


         OMEModelObject::indexed_container<ome::xml::model::Image, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedImageList () const;


         OMEModelObject::indexed_container<ome::xml::model::Image, ome::compat::weak_ptr>::type

         getLinkedImageList () const;


         const ome::compat::weak_ptr<ome::xml::model::Image>&

         getLinkedImage (OMEModelObject::indexed_container<ome::xml::model::Image, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Image>&

         setLinkedImage (OMEModelObject::indexed_container<ome::xml::model::Image, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Image>& image_BackReference);


         bool

         linkImage (const ome::compat::shared_ptr<ome::xml::model::Image>& image_BackReference);


         bool

         unlinkImage (const ome::compat::shared_ptr<ome::xml::model::Image>& image_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Pixels, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedPixelsList () const;


         OMEModelObject::indexed_container<ome::xml::model::Pixels, ome::compat::weak_ptr>::type

         getLinkedPixelsList () const;


         const ome::compat::weak_ptr<ome::xml::model::Pixels>&

         getLinkedPixels (OMEModelObject::indexed_container<ome::xml::model::Pixels, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Pixels>&

         setLinkedPixels (OMEModelObject::indexed_container<ome::xml::model::Pixels, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Pixels>& pixels_BackReference);


         bool

         linkPixels (const ome::compat::shared_ptr<ome::xml::model::Pixels>& pixels_BackReference);


         bool

         unlinkPixels (const ome::compat::shared_ptr<ome::xml::model::Pixels>& pixels_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Plane, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedPlaneList () const;


         OMEModelObject::indexed_container<ome::xml::model::Plane, ome::compat::weak_ptr>::type

         getLinkedPlaneList () const;


         const ome::compat::weak_ptr<ome::xml::model::Plane>&

         getLinkedPlane (OMEModelObject::indexed_container<ome::xml::model::Plane, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Plane>&

         setLinkedPlane (OMEModelObject::indexed_container<ome::xml::model::Plane, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Plane>& plane_BackReference);


         bool

         linkPlane (const ome::compat::shared_ptr<ome::xml::model::Plane>& plane_BackReference);


         bool

         unlinkPlane (const ome::compat::shared_ptr<ome::xml::model::Plane>& plane_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Channel, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedChannelList () const;


         OMEModelObject::indexed_container<ome::xml::model::Channel, ome::compat::weak_ptr>::type

         getLinkedChannelList () const;


         const ome::compat::weak_ptr<ome::xml::model::Channel>&

         getLinkedChannel (OMEModelObject::indexed_container<ome::xml::model::Channel, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Channel>&

         setLinkedChannel (OMEModelObject::indexed_container<ome::xml::model::Channel, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Channel>& channel_BackReference);


         bool

         linkChannel (const ome::compat::shared_ptr<ome::xml::model::Channel>& channel_BackReference);


         bool

         unlinkChannel (const ome::compat::shared_ptr<ome::xml::model::Channel>& channel_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Project, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedProjectList () const;


         OMEModelObject::indexed_container<ome::xml::model::Project, ome::compat::weak_ptr>::type

         getLinkedProjectList () const;


         const ome::compat::weak_ptr<ome::xml::model::Project>&

         getLinkedProject (OMEModelObject::indexed_container<ome::xml::model::Project, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Project>&

         setLinkedProject (OMEModelObject::indexed_container<ome::xml::model::Project, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Project>& project_BackReference);


         bool

         linkProject (const ome::compat::shared_ptr<ome::xml::model::Project>& project_BackReference);


         bool

         unlinkProject (const ome::compat::shared_ptr<ome::xml::model::Project>& project_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedExperimenterGroupList () const;


         OMEModelObject::indexed_container<ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr>::type

         getLinkedExperimenterGroupList () const;


         const ome::compat::weak_ptr<ome::xml::model::ExperimenterGroup>&

         getLinkedExperimenterGroup (OMEModelObject::indexed_container<ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::ExperimenterGroup>&

         setLinkedExperimenterGroup (OMEModelObject::indexed_container<ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::ExperimenterGroup>& experimenterGroup_BackReference);


         bool

         linkExperimenterGroup (const ome::compat::shared_ptr<ome::xml::model::ExperimenterGroup>& experimenterGroup_BackReference);


         bool

         unlinkExperimenterGroup (const ome::compat::shared_ptr<ome::xml::model::ExperimenterGroup>& experimenterGroup_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Dataset, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedDatasetList () const;


         OMEModelObject::indexed_container<ome::xml::model::Dataset, ome::compat::weak_ptr>::type

         getLinkedDatasetList () const;


         const ome::compat::weak_ptr<ome::xml::model::Dataset>&

         getLinkedDataset (OMEModelObject::indexed_container<ome::xml::model::Dataset, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Dataset>&

         setLinkedDataset (OMEModelObject::indexed_container<ome::xml::model::Dataset, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Dataset>& dataset_BackReference);


         bool

         linkDataset (const ome::compat::shared_ptr<ome::xml::model::Dataset>& dataset_BackReference);


         bool

         unlinkDataset (const ome::compat::shared_ptr<ome::xml::model::Dataset>& dataset_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Experimenter, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedExperimenterList () const;


         OMEModelObject::indexed_container<ome::xml::model::Experimenter, ome::compat::weak_ptr>::type

         getLinkedExperimenterList () const;


         const ome::compat::weak_ptr<ome::xml::model::Experimenter>&

         getLinkedExperimenter (OMEModelObject::indexed_container<ome::xml::model::Experimenter, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Experimenter>&

         setLinkedExperimenter (OMEModelObject::indexed_container<ome::xml::model::Experimenter, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Experimenter>& experimenter_BackReference);


         bool

         linkExperimenter (const ome::compat::shared_ptr<ome::xml::model::Experimenter>& experimenter_BackReference);


         bool

         unlinkExperimenter (const ome::compat::shared_ptr<ome::xml::model::Experimenter>& experimenter_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::ROI, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedROIList () const;


         OMEModelObject::indexed_container<ome::xml::model::ROI, ome::compat::weak_ptr>::type

         getLinkedROIList () const;


         const ome::compat::weak_ptr<ome::xml::model::ROI>&

         getLinkedROI (OMEModelObject::indexed_container<ome::xml::model::ROI, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::ROI>&

         setLinkedROI (OMEModelObject::indexed_container<ome::xml::model::ROI, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::ROI>& roi_BackReference);


         bool

         linkROI (const ome::compat::shared_ptr<ome::xml::model::ROI>& roi_BackReference);


         bool

         unlinkROI (const ome::compat::shared_ptr<ome::xml::model::ROI>& roi_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Plate, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedPlateList () const;


         OMEModelObject::indexed_container<ome::xml::model::Plate, ome::compat::weak_ptr>::type

         getLinkedPlateList () const;


         const ome::compat::weak_ptr<ome::xml::model::Plate>&

         getLinkedPlate (OMEModelObject::indexed_container<ome::xml::model::Plate, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Plate>&

         setLinkedPlate (OMEModelObject::indexed_container<ome::xml::model::Plate, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Plate>& plate_BackReference);


         bool

         linkPlate (const ome::compat::shared_ptr<ome::xml::model::Plate>& plate_BackReference);


         bool

         unlinkPlate (const ome::compat::shared_ptr<ome::xml::model::Plate>& plate_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Reagent, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedReagentList () const;


         OMEModelObject::indexed_container<ome::xml::model::Reagent, ome::compat::weak_ptr>::type

         getLinkedReagentList () const;


         const ome::compat::weak_ptr<ome::xml::model::Reagent>&

         getLinkedReagent (OMEModelObject::indexed_container<ome::xml::model::Reagent, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Reagent>&

         setLinkedReagent (OMEModelObject::indexed_container<ome::xml::model::Reagent, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Reagent>& reagent_BackReference);


         bool

         linkReagent (const ome::compat::shared_ptr<ome::xml::model::Reagent>& reagent_BackReference);


         bool

         unlinkReagent (const ome::compat::shared_ptr<ome::xml::model::Reagent>& reagent_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedScreenList () const;


         OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type

         getLinkedScreenList () const;


         const ome::compat::weak_ptr<ome::xml::model::Screen>&

         getLinkedScreen (OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Screen>&

         setLinkedScreen (OMEModelObject::indexed_container<ome::xml::model::Screen, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Screen>& screen_BackReference);


         bool

         linkScreen (const ome::compat::shared_ptr<ome::xml::model::Screen>& screen_BackReference);


         bool

         unlinkScreen (const ome::compat::shared_ptr<ome::xml::model::Screen>& screen_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::PlateAcquisition, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedPlateAcquisitionList () const;


         OMEModelObject::indexed_container<ome::xml::model::PlateAcquisition, ome::compat::weak_ptr>::type

         getLinkedPlateAcquisitionList () const;


         const ome::compat::weak_ptr<ome::xml::model::PlateAcquisition>&

         getLinkedPlateAcquisition (OMEModelObject::indexed_container<ome::xml::model::PlateAcquisition, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::PlateAcquisition>&

         setLinkedPlateAcquisition (OMEModelObject::indexed_container<ome::xml::model::PlateAcquisition, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>& plateAcquisition_BackReference);


         bool

         linkPlateAcquisition (const ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>& plateAcquisition_BackReference);


         bool

         unlinkPlateAcquisition (const ome::compat::shared_ptr<ome::xml::model::PlateAcquisition>& plateAcquisition_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::Well, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedWellList () const;


         OMEModelObject::indexed_container<ome::xml::model::Well, ome::compat::weak_ptr>::type

         getLinkedWellList () const;


         const ome::compat::weak_ptr<ome::xml::model::Well>&

         getLinkedWell (OMEModelObject::indexed_container<ome::xml::model::Well, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::Well>&

         setLinkedWell (OMEModelObject::indexed_container<ome::xml::model::Well, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::Well>& well_BackReference);


         bool

         linkWell (const ome::compat::shared_ptr<ome::xml::model::Well>& well_BackReference);


         bool

         unlinkWell (const ome::compat::shared_ptr<ome::xml::model::Well>& well_BackReference);


         OMEModelObject::indexed_container<ome::xml::model::WellSample, ome::compat::weak_ptr>::type::size_type

         sizeOfLinkedWellSampleList () const;


         OMEModelObject::indexed_container<ome::xml::model::WellSample, ome::compat::weak_ptr>::type

         getLinkedWellSampleList () const;


         const ome::compat::weak_ptr<ome::xml::model::WellSample>&

         getLinkedWellSample (OMEModelObject::indexed_container<ome::xml::model::WellSample, ome::compat::weak_ptr>::type::size_type index) const;


         const ome::compat::weak_ptr<ome::xml::model::WellSample>&

         setLinkedWellSample (OMEModelObject::indexed_container<ome::xml::model::WellSample, ome::compat::weak_ptr>::type::size_type index,

                                      const ome::compat::shared_ptr<ome::xml::model::WellSample>& wellSample_BackReference);


         bool

         linkWellSample (const ome::compat::shared_ptr<ome::xml::model::WellSample>& wellSample_BackReference);


         bool

         unlinkWellSample (const ome::compat::shared_ptr<ome::xml::model::WellSample>& wellSample_BackReference);


         virtual common::xml::dom::Element

         asXMLElement (common::xml::dom::Document& document) const;


       protected:

         // Documented in base class.

         virtual common::xml::dom::Element

         asXMLElementInternal (common::xml::dom::Document& document,

                               common::xml::dom::Element&  element) const;


       public:

        // Documented in superclass.

        const std::string&

        getXMLNamespace() const;

       };


     }

   }

 }


 #endif // OME_XML_MODEL_ANNOTATION_H


 /*

  * Local Variables:

  * mode:C++

  * End:

  */

ome::xml::model::OMEModel
OME model interface (abstract top-level container)
Definition: OMEModel.h:62

ome::xml::model::Annotation::getLinkedReagentList
OMEModelObject::indexed_container< ome::xml::model::Reagent, ome::compat::weak_ptr >::type getLinkedReagentList() const
Get the linked Reagent list.
Definition: Annotation.cpp:1063

ome::xml::model::Annotation::linkDataset
bool linkDataset(const ome::compat::shared_ptr< ome::xml::model::Dataset > &dataset_BackReference)
Link Dataset.
Definition: Annotation.cpp:853

ome::xml::model::Annotation::annotator
ome::compat::shared_ptr< std::string > annotator
Annotator property.
Definition: Annotation.h:100

ome::xml::model::Annotation::linkPlateAcquisition
bool linkPlateAcquisition(const ome::compat::shared_ptr< ome::xml::model::PlateAcquisition > &plateAcquisition_BackReference)
Link PlateAcquisition.
Definition: Annotation.cpp:1201

ome::xml::model::Annotation::imageLinks
OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type imageLinks
Image_BackReference back reference (occurs more than once)
Definition: Annotation.h:106

ome::xml::model::Annotation::getLinkedROIList
OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type getLinkedROIList() const
Get the linked ROI list.
Definition: Annotation.cpp:947

ome::xml::model::Annotation::namespace_
ome::compat::shared_ptr< std::string > namespace_
Namespace property.
Definition: Annotation.h:96

ome::xml::model::Annotation::unlinkROI
bool unlinkROI(const ome::compat::shared_ptr< ome::xml::model::ROI > &roi_BackReference)
Unlink ROI.
Definition: Annotation.cpp:982

ome::xml::model::Annotation::linkWell
bool linkWell(const ome::compat::shared_ptr< ome::xml::model::Well > &well_BackReference)
Link Well.
Definition: Annotation.cpp:1259

ome::xml::model::Annotation::getNamespace
ome::compat::shared_ptr< std::string > getNamespace()
Get the Namespace property.
Definition: Annotation.cpp:342

ome::xml::model::Annotation::getLinkedWellList
OMEModelObject::indexed_container< ome::xml::model::Well, ome::compat::weak_ptr >::type getLinkedWellList() const
Get the linked Well list.
Definition: Annotation.cpp:1237

ome::xml::model::Annotation::sizeOfLinkedPixelsList
OMEModelObject::indexed_container< ome::xml::model::Pixels, ome::compat::weak_ptr >::type::size_type sizeOfLinkedPixelsList() const
Get size of linked Pixels list.
Definition: Annotation.cpp:535

ome::xml::model::Annotation::getLinkedPixels
const ome::compat::weak_ptr< ome::xml::model::Pixels > & getLinkedPixels(OMEModelObject::indexed_container< ome::xml::model::Pixels, ome::compat::weak_ptr >::type::size_type index) const
Get linked Pixels.
Definition: Annotation.cpp:547

ome::xml::model::Annotation::sizeOfLinkedProjectList
OMEModelObject::indexed_container< ome::xml::model::Project, ome::compat::weak_ptr >::type::size_type sizeOfLinkedProjectList() const
Get size of linked Project list.
Definition: Annotation.cpp:709

ome::xml::model::Annotation::setLinkedChannel
const ome::compat::weak_ptr< ome::xml::model::Channel > & setLinkedChannel(OMEModelObject::indexed_container< ome::xml::model::Channel, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Channel > &channel_BackReference)
Set linked Channel.
Definition: Annotation.cpp:669

ome::xml::model::Annotation::wellSampleLinks
OMEModelObject::indexed_container< ome::xml::model::WellSample, ome::compat::weak_ptr >::type wellSampleLinks
WellSample_BackReference back reference (occurs more than once)
Definition: Annotation.h:134

ome::xml::model::Annotation::unlinkWellSample
bool unlinkWellSample(const ome::compat::shared_ptr< ome::xml::model::WellSample > &wellSample_BackReference)
Unlink WellSample.
Definition: Annotation.cpp:1330

ome::xml::model::Annotation::getLinkedChannelList
OMEModelObject::indexed_container< ome::xml::model::Channel, ome::compat::weak_ptr >::type getLinkedChannelList() const
Get the linked Channel list.
Definition: Annotation.cpp:657

ome::xml::model::Annotation::sizeOfLinkedChannelList
OMEModelObject::indexed_container< ome::xml::model::Channel, ome::compat::weak_ptr >::type::size_type sizeOfLinkedChannelList() const
Get size of linked Channel list.
Definition: Annotation.cpp:651

ome::xml::model::Annotation::unlinkPlane
bool unlinkPlane(const ome::compat::shared_ptr< ome::xml::model::Plane > &plane_BackReference)
Unlink Plane.
Definition: Annotation.cpp:634

ome::xml::model::Annotation::unlinkScreen
bool unlinkScreen(const ome::compat::shared_ptr< ome::xml::model::Screen > &screen_BackReference)
Unlink Screen.
Definition: Annotation.cpp:1156

ome::xml::model::Annotation::unlinkPlate
bool unlinkPlate(const ome::compat::shared_ptr< ome::xml::model::Plate > &plate_BackReference)
Unlink Plate.
Definition: Annotation.cpp:1040

ome::xml::model::Annotation::experimenterLinks
OMEModelObject::indexed_container< ome::xml::model::Experimenter, ome::compat::weak_ptr >::type experimenterLinks
Experimenter_BackReference back reference (occurs more than once)
Definition: Annotation.h:120

ome::xml::model::Annotation::getXMLNamespace
const std::string & getXMLNamespace() const
Get the XML namespace for this model object.
Definition: Annotation.cpp:1471

ome::xml::model::Annotation::setLinkedExperimenter
const ome::compat::weak_ptr< ome::xml::model::Experimenter > & setLinkedExperimenter(OMEModelObject::indexed_container< ome::xml::model::Experimenter, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter_BackReference)
Set linked Experimenter.
Definition: Annotation.cpp:901

ome::xml::model::Annotation::getLinkedExperimenterList
OMEModelObject::indexed_container< ome::xml::model::Experimenter, ome::compat::weak_ptr >::type getLinkedExperimenterList() const
Get the linked Experimenter list.
Definition: Annotation.cpp:889

ome::xml::model::Annotation::sizeOfLinkedExperimenterList
OMEModelObject::indexed_container< ome::xml::model::Experimenter, ome::compat::weak_ptr >::type::size_type sizeOfLinkedExperimenterList() const
Get size of linked Experimenter list.
Definition: Annotation.cpp:883

ome::xml::model::Annotation::unlinkDataset
bool unlinkDataset(const ome::compat::shared_ptr< ome::xml::model::Dataset > &dataset_BackReference)
Unlink Dataset.
Definition: Annotation.cpp:866

ome::xml::model::Annotation::getLinkedScreen
const ome::compat::weak_ptr< ome::xml::model::Screen > & getLinkedScreen(OMEModelObject::indexed_container< ome::xml::model::Screen, ome::compat::weak_ptr >::type::size_type index) const
Get linked Screen.
Definition: Annotation.cpp:1127

ome::xml::model::Annotation::sizeOfLinkedROIList
OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type::size_type sizeOfLinkedROIList() const
Get size of linked ROI list.
Definition: Annotation.cpp:941

ome::xml::model::Annotation::getLinkedROI
const ome::compat::weak_ptr< ome::xml::model::ROI > & getLinkedROI(OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type::size_type index) const
Get linked ROI.
Definition: Annotation.cpp:953

ome::xml::model::Annotation::~Annotation
virtual ~Annotation()
Destructor.
Definition: Annotation.cpp:225

ome::common::xml::dom::Document
DOM Document wrapper.
Definition: Document.h:82

ome::common::xml::dom::Element
DOM Element wrapper.
Definition: Element.h:66

ome::xml::model::Annotation::setLinkedProject
const ome::compat::weak_ptr< ome::xml::model::Project > & setLinkedProject(OMEModelObject::indexed_container< ome::xml::model::Project, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Project > &project_BackReference)
Set linked Project.
Definition: Annotation.cpp:727

ome::xml::model::detail::OMEModelObject
OME model object (concrete implementation).
Definition: OMEModelObject.h:64

ome::xml::model::Annotation::getLinkedWellSample
const ome::compat::weak_ptr< ome::xml::model::WellSample > & getLinkedWellSample(OMEModelObject::indexed_container< ome::xml::model::WellSample, ome::compat::weak_ptr >::type::size_type index) const
Get linked WellSample.
Definition: Annotation.cpp:1301

ome::xml::model::Annotation::getLinkedWell
const ome::compat::weak_ptr< ome::xml::model::Well > & getLinkedWell(OMEModelObject::indexed_container< ome::xml::model::Well, ome::compat::weak_ptr >::type::size_type index) const
Get linked Well.
Definition: Annotation.cpp:1243

ome::xml::model::Annotation::linkPixels
bool linkPixels(const ome::compat::shared_ptr< ome::xml::model::Pixels > &pixels_BackReference)
Link Pixels.
Definition: Annotation.cpp:563

ome::xml::model::OMEModelObject::indexed_container::type
boost::multi_index_container< Ptr< T >, boost::multi_index::indexed_by< boost::multi_index::random_access<>, boost::multi_index::ordered_unique< boost::multi_index::identity< Ptr< T > >, ome::compat::owner_less< Ptr< T > > > > > type
Multi-index container type.
Definition: OMEModelObject.h:94

ome::xml::model::Annotation::linkReagent
bool linkReagent(const ome::compat::shared_ptr< ome::xml::model::Reagent > &reagent_BackReference)
Link Reagent.
Definition: Annotation.cpp:1085

ome::xml::model::Annotation::getLinkedDataset
const ome::compat::weak_ptr< ome::xml::model::Dataset > & getLinkedDataset(OMEModelObject::indexed_container< ome::xml::model::Dataset, ome::compat::weak_ptr >::type::size_type index) const
Get linked Dataset.
Definition: Annotation.cpp:837

ome::xml::model::Annotation::setLinkedExperimenterGroup
const ome::compat::weak_ptr< ome::xml::model::ExperimenterGroup > & setLinkedExperimenterGroup(OMEModelObject::indexed_container< ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup_BackReference)
Set linked ExperimenterGroup.
Definition: Annotation.cpp:785

ome::xml::model::Annotation::linkWellSample
bool linkWellSample(const ome::compat::shared_ptr< ome::xml::model::WellSample > &wellSample_BackReference)
Link WellSample.
Definition: Annotation.cpp:1317

ome::xml::model::Annotation::sizeOfLinkedPlateAcquisitionList
OMEModelObject::indexed_container< ome::xml::model::PlateAcquisition, ome::compat::weak_ptr >::type::size_type sizeOfLinkedPlateAcquisitionList() const
Get size of linked PlateAcquisition list.
Definition: Annotation.cpp:1173

ome::xml::model::Annotation::getID
const std::string & getID() const
Get the ID property.
Definition: Annotation.cpp:363

ome::xml::model::Annotation::sizeOfLinkedImageList
OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type::size_type sizeOfLinkedImageList() const
Get size of linked Image list.
Definition: Annotation.cpp:477

ome::xml::model::Annotation::getLinkedChannel
const ome::compat::weak_ptr< ome::xml::model::Channel > & getLinkedChannel(OMEModelObject::indexed_container< ome::xml::model::Channel, ome::compat::weak_ptr >::type::size_type index) const
Get linked Channel.
Definition: Annotation.cpp:663

ome::xml::model::Annotation::unlinkChannel
bool unlinkChannel(const ome::compat::shared_ptr< ome::xml::model::Channel > &channel_BackReference)
Unlink Channel.
Definition: Annotation.cpp:692

ome::xml::model::Annotation::linkExperimenter
bool linkExperimenter(const ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter_BackReference)
Link Experimenter.
Definition: Annotation.cpp:911

ome::xml::model::Annotation::unlinkImage
bool unlinkImage(const ome::compat::shared_ptr< ome::xml::model::Image > &image_BackReference)
Unlink Image.
Definition: Annotation.cpp:518

ome::xml::model::Annotation::getLinkedAnnotation
const ome::compat::weak_ptr< ome::xml::model::Annotation > & getLinkedAnnotation(OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type::size_type index) const
Get linked Annotation.
Definition: Annotation.cpp:431

ome::xml::model::Annotation::setLinkedPlane
const ome::compat::weak_ptr< ome::xml::model::Plane > & setLinkedPlane(OMEModelObject::indexed_container< ome::xml::model::Plane, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Plane > &plane_BackReference)
Set linked Plane.
Definition: Annotation.cpp:611

ome::xml::model::Annotation::getLinkedPlaneList
OMEModelObject::indexed_container< ome::xml::model::Plane, ome::compat::weak_ptr >::type getLinkedPlaneList() const
Get the linked Plane list.
Definition: Annotation.cpp:599

ome::xml::model::Annotation::getLinkedScreenList
OMEModelObject::indexed_container< ome::xml::model::Screen, ome::compat::weak_ptr >::type getLinkedScreenList() const
Get the linked Screen list.
Definition: Annotation.cpp:1121

ome::xml::model::Annotation::linkExperimenterGroup
bool linkExperimenterGroup(const ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup_BackReference)
Link ExperimenterGroup.
Definition: Annotation.cpp:795

ome::xml::model::Annotation::unlinkWell
bool unlinkWell(const ome::compat::shared_ptr< ome::xml::model::Well > &well_BackReference)
Unlink Well.
Definition: Annotation.cpp:1272

ome::xml::model::Annotation::pixelsLinks
OMEModelObject::indexed_container< ome::xml::model::Pixels, ome::compat::weak_ptr >::type pixelsLinks
Pixels_BackReference back reference (occurs more than once)
Definition: Annotation.h:108

ome::xml::model::Annotation::sizeOfLinkedPlaneList
OMEModelObject::indexed_container< ome::xml::model::Plane, ome::compat::weak_ptr >::type::size_type sizeOfLinkedPlaneList() const
Get size of linked Plane list.
Definition: Annotation.cpp:593

ome::xml::model::Annotation::linkAnnotation
bool linkAnnotation(const ome::compat::shared_ptr< ome::xml::model::Annotation > &annotation)
Link Annotation.
Definition: Annotation.cpp:447

ome::xml::model::Annotation::annotationLinks
OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type annotationLinks
AnnotationRef reference (occurs more than once)
Definition: Annotation.h:104

ome::xml::model::Annotation::getLinkedPlateAcquisitionList
OMEModelObject::indexed_container< ome::xml::model::PlateAcquisition, ome::compat::weak_ptr >::type getLinkedPlateAcquisitionList() const
Get the linked PlateAcquisition list.
Definition: Annotation.cpp:1179

ome::xml::model::Annotation::linkScreen
bool linkScreen(const ome::compat::shared_ptr< ome::xml::model::Screen > &screen_BackReference)
Link Screen.
Definition: Annotation.cpp:1143

ome::xml::model::Annotation::setLinkedPixels
const ome::compat::weak_ptr< ome::xml::model::Pixels > & setLinkedPixels(OMEModelObject::indexed_container< ome::xml::model::Pixels, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Pixels > &pixels_BackReference)
Set linked Pixels.
Definition: Annotation.cpp:553

ome::xml::model::OMEModelObject::indexed_container
Multi-index container for efficient ordered insertion and deletion of model object references...
Definition: OMEModelObject.h:85

ome::xml::model::Annotation::setLinkedWellSample
const ome::compat::weak_ptr< ome::xml::model::WellSample > & setLinkedWellSample(OMEModelObject::indexed_container< ome::xml::model::WellSample, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::WellSample > &wellSample_BackReference)
Set linked WellSample.
Definition: Annotation.cpp:1307

ome::xml::model::Annotation::getLinkedAnnotationList
OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type getLinkedAnnotationList() const
Get the linked Annotation list.
Definition: Annotation.cpp:425

ome::xml::model::Annotation::unlinkExperimenter
bool unlinkExperimenter(const ome::compat::shared_ptr< ome::xml::model::Experimenter > &experimenter_BackReference)
Unlink Experimenter.
Definition: Annotation.cpp:924

ome
Open Microscopy Environment C++ implementation.
Definition: CoreMetadata.cpp:40

ome::xml::model::Annotation::unlinkReagent
bool unlinkReagent(const ome::compat::shared_ptr< ome::xml::model::Reagent > &reagent_BackReference)
Unlink Reagent.
Definition: Annotation.cpp:1098

ome::xml::model::Annotation::getLinkedPixelsList
OMEModelObject::indexed_container< ome::xml::model::Pixels, ome::compat::weak_ptr >::type getLinkedPixelsList() const
Get the linked Pixels list.
Definition: Annotation.cpp:541

ome::xml::model::Annotation::getLinkedExperimenter
const ome::compat::weak_ptr< ome::xml::model::Experimenter > & getLinkedExperimenter(OMEModelObject::indexed_container< ome::xml::model::Experimenter, ome::compat::weak_ptr >::type::size_type index) const
Get linked Experimenter.
Definition: Annotation.cpp:895

ome::xml::model::Annotation::unlinkAnnotation
bool unlinkAnnotation(const ome::compat::shared_ptr< ome::xml::model::Annotation > &annotation)
Unlink Annotation.
Definition: Annotation.cpp:460

ome::xml::model::Annotation::linkChannel
bool linkChannel(const ome::compat::shared_ptr< ome::xml::model::Channel > &channel_BackReference)
Link Channel.
Definition: Annotation.cpp:679

ome::xml::model::Annotation::wellLinks
OMEModelObject::indexed_container< ome::xml::model::Well, ome::compat::weak_ptr >::type wellLinks
Well_BackReference back reference (occurs more than once)
Definition: Annotation.h:132

ome::xml::model::Annotation::datasetLinks
OMEModelObject::indexed_container< ome::xml::model::Dataset, ome::compat::weak_ptr >::type datasetLinks
Dataset_BackReference back reference (occurs more than once)
Definition: Annotation.h:118

ome::xml::model::Annotation::screenLinks
OMEModelObject::indexed_container< ome::xml::model::Screen, ome::compat::weak_ptr >::type screenLinks
Screen_BackReference back reference (occurs more than once)
Definition: Annotation.h:128

ome::xml::model::Annotation
Annotation model object.
Definition: Annotation.h:92

ome::xml::model::Annotation::getLinkedExperimenterGroupList
OMEModelObject::indexed_container< ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr >::type getLinkedExperimenterGroupList() const
Get the linked ExperimenterGroup list.
Definition: Annotation.cpp:773

ome::xml::model::Annotation::plateAcquisitionLinks
OMEModelObject::indexed_container< ome::xml::model::PlateAcquisition, ome::compat::weak_ptr >::type plateAcquisitionLinks
PlateAcquisition_BackReference back reference (occurs more than once)
Definition: Annotation.h:130

ome::xml::model::Annotation::getLinkedExperimenterGroup
const ome::compat::weak_ptr< ome::xml::model::ExperimenterGroup > & getLinkedExperimenterGroup(OMEModelObject::indexed_container< ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr >::type::size_type index) const
Get linked ExperimenterGroup.
Definition: Annotation.cpp:779

ome::xml::model::Annotation::linkPlane
bool linkPlane(const ome::compat::shared_ptr< ome::xml::model::Plane > &plane_BackReference)
Link Plane.
Definition: Annotation.cpp:621

ome::xml::model::Annotation::getLinkedReagent
const ome::compat::weak_ptr< ome::xml::model::Reagent > & getLinkedReagent(OMEModelObject::indexed_container< ome::xml::model::Reagent, ome::compat::weak_ptr >::type::size_type index) const
Get linked Reagent.
Definition: Annotation.cpp:1069

ome::xml::model::Annotation::getLinkedPlateList
OMEModelObject::indexed_container< ome::xml::model::Plate, ome::compat::weak_ptr >::type getLinkedPlateList() const
Get the linked Plate list.
Definition: Annotation.cpp:1005

ome::xml::model::Annotation::linkPlate
bool linkPlate(const ome::compat::shared_ptr< ome::xml::model::Plate > &plate_BackReference)
Link Plate.
Definition: Annotation.cpp:1027

ome::xml::model::Annotation::unlinkPixels
bool unlinkPixels(const ome::compat::shared_ptr< ome::xml::model::Pixels > &pixels_BackReference)
Unlink Pixels.
Definition: Annotation.cpp:576

ome::xml::model::Annotation::asXMLElementInternal
virtual common::xml::dom::Element asXMLElementInternal(common::xml::dom::Document &document, common::xml::dom::Element &element) const
Transform the object hierarchy rooted at this element to XML.
Definition: Annotation.cpp:1354

ome::xml::model::Annotation::getLinkedProjectList
OMEModelObject::indexed_container< ome::xml::model::Project, ome::compat::weak_ptr >::type getLinkedProjectList() const
Get the linked Project list.
Definition: Annotation.cpp:715

ome::xml::model::Annotation::setNamespace
void setNamespace(ome::compat::shared_ptr< std::string > &namespace_)
Set the Namespace property.
Definition: Annotation.cpp:356

ome::xml::model::Annotation::sizeOfLinkedWellList
OMEModelObject::indexed_container< ome::xml::model::Well, ome::compat::weak_ptr >::type::size_type sizeOfLinkedWellList() const
Get size of linked Well list.
Definition: Annotation.cpp:1231

ome::xml::model::Annotation::setLinkedDataset
const ome::compat::weak_ptr< ome::xml::model::Dataset > & setLinkedDataset(OMEModelObject::indexed_container< ome::xml::model::Dataset, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Dataset > &dataset_BackReference)
Set linked Dataset.
Definition: Annotation.cpp:843

ome::xml::model::Annotation::unlinkProject
bool unlinkProject(const ome::compat::shared_ptr< ome::xml::model::Project > &project_BackReference)
Unlink Project.
Definition: Annotation.cpp:750

ome::xml::model::Annotation::getLinkedPlateAcquisition
const ome::compat::weak_ptr< ome::xml::model::PlateAcquisition > & getLinkedPlateAcquisition(OMEModelObject::indexed_container< ome::xml::model::PlateAcquisition, ome::compat::weak_ptr >::type::size_type index) const
Get linked PlateAcquisition.
Definition: Annotation.cpp:1185

ome::xml::model::Annotation::getLinkedPlate
const ome::compat::weak_ptr< ome::xml::model::Plate > & getLinkedPlate(OMEModelObject::indexed_container< ome::xml::model::Plate, ome::compat::weak_ptr >::type::size_type index) const
Get linked Plate.
Definition: Annotation.cpp:1011

ome::xml::model::Annotation::channelLinks
OMEModelObject::indexed_container< ome::xml::model::Channel, ome::compat::weak_ptr >::type channelLinks
Channel_BackReference back reference (occurs more than once)
Definition: Annotation.h:112

ome::xml::model::Annotation::getLinkedImage
const ome::compat::weak_ptr< ome::xml::model::Image > & getLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type::size_type index) const
Get linked Image.
Definition: Annotation.cpp:489

ome::xml::model::Annotation::setID
void setID(const std::string &id)
Set the ID property.
Definition: Annotation.cpp:370

ome::xml::model::Annotation::plateLinks
OMEModelObject::indexed_container< ome::xml::model::Plate, ome::compat::weak_ptr >::type plateLinks
Plate_BackReference back reference (occurs more than once)
Definition: Annotation.h:124

ome::xml::model::Annotation::update
virtual void update(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Update the object hierarchy recursively from an XML DOM tree.
Definition: Annotation.cpp:240

ome::xml::model::Annotation::unlinkPlateAcquisition
bool unlinkPlateAcquisition(const ome::compat::shared_ptr< ome::xml::model::PlateAcquisition > &plateAcquisition_BackReference)
Unlink PlateAcquisition.
Definition: Annotation.cpp:1214

ome::xml::model::Annotation::unlinkExperimenterGroup
bool unlinkExperimenterGroup(const ome::compat::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup_BackReference)
Unlink ExperimenterGroup.
Definition: Annotation.cpp:808

ome::xml::model::Annotation::getLinkedPlane
const ome::compat::weak_ptr< ome::xml::model::Plane > & getLinkedPlane(OMEModelObject::indexed_container< ome::xml::model::Plane, ome::compat::weak_ptr >::type::size_type index) const
Get linked Plane.
Definition: Annotation.cpp:605

ome::xml::model::Annotation::sizeOfLinkedDatasetList
OMEModelObject::indexed_container< ome::xml::model::Dataset, ome::compat::weak_ptr >::type::size_type sizeOfLinkedDatasetList() const
Get size of linked Dataset list.
Definition: Annotation.cpp:825

ome::xml::model::Annotation::roiLinks
OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type roiLinks
ROI_BackReference back reference (occurs more than once)
Definition: Annotation.h:122

ome::xml::model::Annotation::setLinkedImage
const ome::compat::weak_ptr< ome::xml::model::Image > & setLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Image > &image_BackReference)
Set linked Image.
Definition: Annotation.cpp:495

ome::xml::model::Annotation::id
std::string id
ID property.
Definition: Annotation.h:98

ome::xml::model::Annotation::asXMLElement
virtual common::xml::dom::Element asXMLElement(common::xml::dom::Document &document) const
Transform the object hierarchy rooted at this element to XML.
Definition: Annotation.cpp:1347

ome::xml::model::Annotation::sizeOfLinkedExperimenterGroupList
OMEModelObject::indexed_container< ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr >::type::size_type sizeOfLinkedExperimenterGroupList() const
Get size of linked ExperimenterGroup list.
Definition: Annotation.cpp:767

ome::xml::model::Annotation::getAnnotator
ome::compat::shared_ptr< std::string > getAnnotator()
Get the Annotator property.
Definition: Annotation.cpp:377

ome::xml::model::Annotation::description
ome::compat::shared_ptr< std::string > description
Description property.
Definition: Annotation.h:102

ome::xml::model::Annotation::setLinkedWell
const ome::compat::weak_ptr< ome::xml::model::Well > & setLinkedWell(OMEModelObject::indexed_container< ome::xml::model::Well, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Well > &well_BackReference)
Set linked Well.
Definition: Annotation.cpp:1249

ome::xml::model::Annotation::getLinkedWellSampleList
OMEModelObject::indexed_container< ome::xml::model::WellSample, ome::compat::weak_ptr >::type getLinkedWellSampleList() const
Get the linked WellSample list.
Definition: Annotation.cpp:1295

ome::xml::model::Annotation::setAnnotator
void setAnnotator(ome::compat::shared_ptr< std::string > &annotator)
Set the Annotator property.
Definition: Annotation.cpp:391

ome::xml::model::Annotation::validElementName
bool validElementName(const std::string &name) const
Check if a given element name is valid for processing by this model object.
Definition: Annotation.cpp:231

ome::xml::model::Annotation::setLinkedScreen
const ome::compat::weak_ptr< ome::xml::model::Screen > & setLinkedScreen(OMEModelObject::indexed_container< ome::xml::model::Screen, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Screen > &screen_BackReference)
Set linked Screen.
Definition: Annotation.cpp:1133

ome::xml::model::Annotation::linkImage
bool linkImage(const ome::compat::shared_ptr< ome::xml::model::Image > &image_BackReference)
Link Image.
Definition: Annotation.cpp:505

ome::xml::model::Annotation::setLinkedAnnotation
const ome::compat::weak_ptr< ome::xml::model::Annotation > & setLinkedAnnotation(OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Annotation > &annotation)
Set linked Annotation.
Definition: Annotation.cpp:437

ome::xml::model::Annotation::setDescription
void setDescription(ome::compat::shared_ptr< std::string > &description)
Set the Description property.
Definition: Annotation.cpp:412

ome::xml::model::Annotation::setLinkedReagent
const ome::compat::weak_ptr< ome::xml::model::Reagent > & setLinkedReagent(OMEModelObject::indexed_container< ome::xml::model::Reagent, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Reagent > &reagent_BackReference)
Set linked Reagent.
Definition: Annotation.cpp:1075

ome::xml::model::Annotation::sizeOfLinkedAnnotationList
OMEModelObject::indexed_container< ome::xml::model::Annotation, ome::compat::weak_ptr >::type::size_type sizeOfLinkedAnnotationList() const
Get size of linked Annotation list.
Definition: Annotation.cpp:419

ome::xml::model::Annotation::setLinkedPlateAcquisition
const ome::compat::weak_ptr< ome::xml::model::PlateAcquisition > & setLinkedPlateAcquisition(OMEModelObject::indexed_container< ome::xml::model::PlateAcquisition, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::PlateAcquisition > &plateAcquisition_BackReference)
Set linked PlateAcquisition.
Definition: Annotation.cpp:1191

ome::xml::model::Annotation::sizeOfLinkedScreenList
OMEModelObject::indexed_container< ome::xml::model::Screen, ome::compat::weak_ptr >::type::size_type sizeOfLinkedScreenList() const
Get size of linked Screen list.
Definition: Annotation.cpp:1115

ome::xml::model::Annotation::getDescription
ome::compat::shared_ptr< std::string > getDescription()
Get the Description property.
Definition: Annotation.cpp:398

ome::xml::model::Annotation::planeLinks
OMEModelObject::indexed_container< ome::xml::model::Plane, ome::compat::weak_ptr >::type planeLinks
Plane_BackReference back reference (occurs more than once)
Definition: Annotation.h:110

ome::xml::model::Annotation::getLinkedImageList
OMEModelObject::indexed_container< ome::xml::model::Image, ome::compat::weak_ptr >::type getLinkedImageList() const
Get the linked Image list.
Definition: Annotation.cpp:483

ome::xml::model::Annotation::Annotation
Annotation()
Default constructor.
Definition: Annotation.cpp:168

ome::xml::model::Annotation::getLinkedProject
const ome::compat::weak_ptr< ome::xml::model::Project > & getLinkedProject(OMEModelObject::indexed_container< ome::xml::model::Project, ome::compat::weak_ptr >::type::size_type index) const
Get linked Project.
Definition: Annotation.cpp:721

ome::xml::model::Annotation::projectLinks
OMEModelObject::indexed_container< ome::xml::model::Project, ome::compat::weak_ptr >::type projectLinks
Project_BackReference back reference (occurs more than once)
Definition: Annotation.h:114

ome::xml::model::Annotation::link
bool link(ome::compat::shared_ptr< Reference > &reference, ome::compat::shared_ptr< ome::xml::model::OMEModelObject > &object)
Link a given OME model object to this model object.
Definition: Annotation.cpp:312

ome::xml::model::Annotation::sizeOfLinkedWellSampleList
OMEModelObject::indexed_container< ome::xml::model::WellSample, ome::compat::weak_ptr >::type::size_type sizeOfLinkedWellSampleList() const
Get size of linked WellSample list.
Definition: Annotation.cpp:1289

log.h
Boost.Log compatibility.

ome::xml::model::Annotation::setLinkedPlate
const ome::compat::weak_ptr< ome::xml::model::Plate > & setLinkedPlate(OMEModelObject::indexed_container< ome::xml::model::Plate, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::Plate > &plate_BackReference)
Set linked Plate.
Definition: Annotation.cpp:1017

ome::xml::model::Annotation::experimenterGroupLinks
OMEModelObject::indexed_container< ome::xml::model::ExperimenterGroup, ome::compat::weak_ptr >::type experimenterGroupLinks
ExperimenterGroup_BackReference back reference (occurs more than once)
Definition: Annotation.h:116

ome::xml::model::Annotation::getLinkedDatasetList
OMEModelObject::indexed_container< ome::xml::model::Dataset, ome::compat::weak_ptr >::type getLinkedDatasetList() const
Get the linked Dataset list.
Definition: Annotation.cpp:831

ome::xml::model::Annotation::linkProject
bool linkProject(const ome::compat::shared_ptr< ome::xml::model::Project > &project_BackReference)
Link Project.
Definition: Annotation.cpp:737

ome::xml::model::Annotation::sizeOfLinkedReagentList
OMEModelObject::indexed_container< ome::xml::model::Reagent, ome::compat::weak_ptr >::type::size_type sizeOfLinkedReagentList() const
Get size of linked Reagent list.
Definition: Annotation.cpp:1057

ome::xml::model::Annotation::linkROI
bool linkROI(const ome::compat::shared_ptr< ome::xml::model::ROI > &roi_BackReference)
Link ROI.
Definition: Annotation.cpp:969

ome::common::xml
Xerces-C modern C++ wrapper.
Definition: Base.h:53

ome::xml::model::Annotation::setLinkedROI
const ome::compat::weak_ptr< ome::xml::model::ROI > & setLinkedROI(OMEModelObject::indexed_container< ome::xml::model::ROI, ome::compat::weak_ptr >::type::size_type index, const ome::compat::shared_ptr< ome::xml::model::ROI > &roi_BackReference)
Set linked ROI.
Definition: Annotation.cpp:959

ome::xml::model::Annotation::reagentLinks
OMEModelObject::indexed_container< ome::xml::model::Reagent, ome::compat::weak_ptr >::type reagentLinks
Reagent_BackReference back reference (occurs more than once)
Definition: Annotation.h:126

ome::xml::model::Annotation::sizeOfLinkedPlateList
OMEModelObject::indexed_container< ome::xml::model::Plate, ome::compat::weak_ptr >::type::size_type sizeOfLinkedPlateList() const
Get size of linked Plate list.
Definition: Annotation.cpp:999