Uses of Class
loci.common.RandomAccessInputStream

Packages that use RandomAccessInputStream

Package	Description
loci.common
loci.common.xml
loci.formats	Bio-Formats: a library for reading and writing popular microscopy file formats.
loci.formats.codec	Package containing Bio-Formats compression and decompression logic.
loci.formats.in	Package containing Bio-Formats file format readers.
loci.formats.out	Package containing Bio-Formats file format writers.
loci.formats.services
loci.formats.tiff	Package containing Bio-Formats TIFF code of general utility.
loci.formats.tools	Package containing utility methods corresponding to the Bio-Formats command line tools.
loci.poi.hpsf
loci.poi.hssf.usermodel	usermodel package maps HSSF low level strutures to familiar workbook/sheet model
loci.poi.poifs.eventfilesystem	The eventfilesystem is an efficient method for reading OLE 2 CDF files.
loci.poi.poifs.filesystem	filesystem package maps OLE 2 Compound document files to a more familiar filesystem interface.
loci.poi.poifs.storage	storage package contains low level binary structures for POIFS's implementation of the OLE 2 Compound Document Format.
ome.jxr	OME JPEG XR: OME library for reading the JPEG XR file format.
ome.jxr.parser	Class hierarchy implementing the chain of responsibility pattern and used during parsing of the file, IFD and image header.
ome.metakit

Uses of RandomAccessInputStream in loci.common

Fields in loci.common declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	ZipHandle.in

Methods in loci.common that return RandomAccessInputStream

Modifier and Type	Method and Description
private static RandomAccessInputStream	ZipHandle.openStream(String file)

Uses of RandomAccessInputStream in loci.common.xml

Methods in loci.common.xml with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
static void	XMLTools.parseXML(RandomAccessInputStream stream, DefaultHandler handler) Parses the XML contained in the given input stream into using the specified XML handler.

Uses of RandomAccessInputStream in loci.formats

Fields in loci.formats declared as RandomAccessInputStream

Modifier and Type	Field and Description
protected RandomAccessInputStream	FormatReader.in Current file.
(package private) RandomAccessInputStream	Memoizer.RandomAccessDeser.loadStream

Methods in loci.formats with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
boolean	FormatReader.isThisType(RandomAccessInputStream stream)
boolean	ReaderWrapper.isThisType(RandomAccessInputStream stream)
boolean	IFormatReader.isThisType(RandomAccessInputStream stream) Checks if the given stream is a valid stream for this file format.
boolean	ImageReader.isThisType(RandomAccessInputStream stream)
boolean	DelegateReader.isThisType(RandomAccessInputStream stream)
protected byte[]	FormatReader.readPlane(RandomAccessInputStream s, int x, int y, int w, int h, byte[] buf) Reads a raw plane from disk.
protected byte[]	FormatReader.readPlane(RandomAccessInputStream s, int x, int y, int w, int h, int scanlinePad, byte[] buf) Reads a raw plane from disk.
static boolean	FormatTools.validStream(RandomAccessInputStream stream, int len, boolean littleEndian) Returns true if the given RandomAccessInputStream conatins at least 'len' bytes.

Uses of RandomAccessInputStream in loci.formats.codec

Fields in loci.formats.codec declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	JPEGTileDecoder.in

Methods in loci.formats.codec with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
int	HuffmanCodec.Decoder.decode(RandomAccessInputStream bb)
byte[]	PassthroughCodec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	NikonCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter must be an instance of NikonCodecOptions, and should have the following fields set: lossless vPredictor curve split bitsPerSample maxBytes width height
byte[]	Base64Codec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	HuffmanCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter must be an instance of HuffmanCodecOptions, and should have the following fields set: table bitsPerSample maxBytes
byte[]	LosslessJPEGCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	MJPBCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter must be an instance of MJPBCodecOptions, and should have the following fields set: interlaced width height bitsPerSample littleEndian interleaved
byte[]	LZWCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: maxBytes
abstract byte[]	BaseCodec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	QTRLECodec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	LZOCodec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	TargaRLECodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: maxBytes CodecOptions.bitsPerSample
byte[]	MSRLECodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: width height previousImage
byte[]	JPEGCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	RPZACodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: width height
byte[]	MSVideoCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: width height bitsPerSample previousImage
byte[]	PackbitsCodec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: maxBytes
byte[]	JPEG2000Codec.decompress(RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	ZlibCodec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	LuraWaveCodec.decompress(RandomAccessInputStream in, CodecOptions options)
byte[]	Codec.decompress(RandomAccessInputStream in, CodecOptions options) Decompresses data from the given RandomAccessInputStream.
int	HuffmanCodec.getSample(RandomAccessInputStream bb, CodecOptions options)
void	JPEGTileDecoder.initialize(RandomAccessInputStream in, int imageWidth)
void	JPEGTileDecoder.initialize(RandomAccessInputStream in, int y, int h, int imageWidth)
int[]	JPEGTileDecoder.preprocess(RandomAccessInputStream in) Pre-process the stream to make sure that the image width and height are non-zero.

Uses of RandomAccessInputStream in loci.formats.in

Fields in loci.formats.in declared as RandomAccessInputStream

Modifier and Type	Field and Description
(package private) RandomAccessInputStream	ZeissTIFFReader.Plane.in
private RandomAccessInputStream	JPEG2000MetadataParser.in Stream that we're parsing metadata from.
private RandomAccessInputStream	NiftiReader.pixelFile File containing the pixel data.
private RandomAccessInputStream	AnalyzeReader.pixelFile File containing the pixel data.
private RandomAccessInputStream	ImagicReader.pixelsFile
private RandomAccessInputStream	TillVisionReader.pixelsStream
private RandomAccessInputStream	BrukerReader.seriesStream
RandomAccessInputStream	ZeissCZIReader.Segment.stream
private RandomAccessInputStream	PhotoshopTiffReader.tag

Methods in loci.formats.in that return RandomAccessInputStream

Modifier and Type	Method and Description
private RandomAccessInputStream	ZeissLSMReader.getCZTag(IFD ifd)
private RandomAccessInputStream	CellomicsReader.getDecompressedStream(String filename)
private RandomAccessInputStream	FV1000Reader.getFile(String name)
private RandomAccessInputStream	FV1000Reader.getPlane(int seriesIndex, int planeIndex)
RandomAccessInputStream	ZeissCZIReader.Segment.getStream()
private RandomAccessInputStream	VolocityReader.getStream(int row)

Methods in loci.formats.in with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
private Long[]	TillVisionReader.findImages(RandomAccessInputStream s)
private int	TillVisionReader.findNextOffset(RandomAccessInputStream s)
private int	TillVisionReader.findNextOffset(RandomAccessInputStream s, byte[] marker)
private int	OBFReader.getFileVersion(RandomAccessInputStream stream)
private int	DicomReader.getLength(RandomAccessInputStream stream, int tag)
private String	ZeissZVIReader.getNextTag(RandomAccessInputStream s)
private int	DicomReader.getNextTag(RandomAccessInputStream stream)
boolean	LEOReader.isThisType(RandomAccessInputStream stream)
boolean	VGSAMReader.isThisType(RandomAccessInputStream stream)
boolean	SlidebookTiffReader.isThisType(RandomAccessInputStream stream)
boolean	L2DReader.isThisType(RandomAccessInputStream stream)
boolean	KodakReader.isThisType(RandomAccessInputStream stream)
boolean	HRDGDFReader.isThisType(RandomAccessInputStream stream)
boolean	SpiderReader.isThisType(RandomAccessInputStream stream)
boolean	MRWReader.isThisType(RandomAccessInputStream stream)
boolean	BurleighReader.isThisType(RandomAccessInputStream stream)
boolean	OperettaReader.isThisType(RandomAccessInputStream stream)
boolean	MIASReader.isThisType(RandomAccessInputStream stream)
boolean	FEITiffReader.isThisType(RandomAccessInputStream stream)
boolean	I2IReader.isThisType(RandomAccessInputStream stream)
boolean	INRReader.isThisType(RandomAccessInputStream stream)
boolean	ImarisHDFReader.isThisType(RandomAccessInputStream stream)
boolean	ZeissCZIReader.isThisType(RandomAccessInputStream stream)
boolean	ZeissZVIReader.isThisType(RandomAccessInputStream stream)
boolean	ImaconReader.isThisType(RandomAccessInputStream stream)
boolean	SISReader.isThisType(RandomAccessInputStream stream)
boolean	VolocityReader.isThisType(RandomAccessInputStream stream)
boolean	BrukerReader.isThisType(RandomAccessInputStream stream)
boolean	NikonReader.isThisType(RandomAccessInputStream stream)
boolean	InCellReader.isThisType(RandomAccessInputStream stream)
boolean	FujiReader.isThisType(RandomAccessInputStream stream)
boolean	ImspectorReader.isThisType(RandomAccessInputStream stream)
boolean	PrairieReader.isThisType(RandomAccessInputStream stream)
boolean	NiftiReader.isThisType(RandomAccessInputStream stream)
boolean	SBIGReader.isThisType(RandomAccessInputStream stream)
boolean	PhotoshopTiffReader.isThisType(RandomAccessInputStream stream)
boolean	NikonTiffReader.isThisType(RandomAccessInputStream stream)
boolean	HitachiReader.isThisType(RandomAccessInputStream stream)
boolean	JEOLReader.isThisType(RandomAccessInputStream stream)
boolean	FluoviewReader.isThisType(RandomAccessInputStream stream)
boolean	SPEReader.isThisType(RandomAccessInputStream stream)
boolean	LeicaReader.isThisType(RandomAccessInputStream stream)
boolean	ImarisReader.isThisType(RandomAccessInputStream stream)
boolean	ZeissLMSReader.isThisType(RandomAccessInputStream stream)
boolean	PCORAWReader.isThisType(RandomAccessInputStream stream)
boolean	PCIReader.isThisType(RandomAccessInputStream stream)
boolean	MolecularImagingReader.isThisType(RandomAccessInputStream stream)
boolean	LIFReader.isThisType(RandomAccessInputStream stream)
boolean	SimplePCITiffReader.isThisType(RandomAccessInputStream stream)
boolean	CellH5Reader.isThisType(RandomAccessInputStream stream)
boolean	IvisionReader.isThisType(RandomAccessInputStream stream)
boolean	PQBinReader.isThisType(RandomAccessInputStream stream)
boolean	SEQReader.isThisType(RandomAccessInputStream stream)
boolean	BioRadGelReader.isThisType(RandomAccessInputStream stream)
boolean	OpenlabRawReader.isThisType(RandomAccessInputStream stream)
boolean	ImprovisionTiffReader.isThisType(RandomAccessInputStream stream)
boolean	BioRadSCNReader.isThisType(RandomAccessInputStream stream)
boolean	KhorosReader.isThisType(RandomAccessInputStream stream)
boolean	ARFReader.isThisType(RandomAccessInputStream stream)
boolean	InCell3000Reader.isThisType(RandomAccessInputStream stream)
boolean	NikonElementsTiffReader.isThisType(RandomAccessInputStream stream)
boolean	BioRadReader.isThisType(RandomAccessInputStream stream)
boolean	TrestleReader.isThisType(RandomAccessInputStream stream)
boolean	ScanrReader.isThisType(RandomAccessInputStream stream)
boolean	AnalyzeReader.isThisType(RandomAccessInputStream stream)
boolean	MetamorphTiffReader.isThisType(RandomAccessInputStream stream)
boolean	IPWReader.isThisType(RandomAccessInputStream stream)
boolean	AmiraReader.isThisType(RandomAccessInputStream stream)
boolean	TopometrixReader.isThisType(RandomAccessInputStream stream)
boolean	AFIReader.isThisType(RandomAccessInputStream stream)
boolean	MetamorphReader.isThisType(RandomAccessInputStream stream)
boolean	DNGReader.isThisType(RandomAccessInputStream stream)
boolean	AliconaReader.isThisType(RandomAccessInputStream stream)
boolean	InveonReader.isThisType(RandomAccessInputStream stream)
boolean	VolocityClippingReader.isThisType(RandomAccessInputStream stream)
boolean	Ecat7Reader.isThisType(RandomAccessInputStream stream)
boolean	FEIReader.isThisType(RandomAccessInputStream stream)
boolean	DeltavisionReader.isThisType(RandomAccessInputStream stream)
boolean	IMODReader.isThisType(RandomAccessInputStream stream)
boolean	PDSReader.isThisType(RandomAccessInputStream stream)
boolean	JPXReader.isThisType(RandomAccessInputStream stream)
boolean	CellomicsReader.isThisType(RandomAccessInputStream stream)
boolean	GatanReader.isThisType(RandomAccessInputStream stream)
boolean	PSDReader.isThisType(RandomAccessInputStream stream)
boolean	OxfordInstrumentsReader.isThisType(RandomAccessInputStream stream)
boolean	ScreenReader.isThisType(RandomAccessInputStream stream)
boolean	PyramidTiffReader.isThisType(RandomAccessInputStream stream)
boolean	SlidebookReader.isThisType(RandomAccessInputStream stream)
boolean	FV1000Reader.isThisType(RandomAccessInputStream stream)
boolean	SMCameraReader.isThisType(RandomAccessInputStream stream)
boolean	GelReader.isThisType(RandomAccessInputStream stream)
boolean	MRCReader.isThisType(RandomAccessInputStream stream)
boolean	UnisokuReader.isThisType(RandomAccessInputStream stream)
boolean	NativeND2Reader.isThisType(RandomAccessInputStream stream)
boolean	VarianFDFReader.isThisType(RandomAccessInputStream stream)
boolean	BDReader.isThisType(RandomAccessInputStream stream)
boolean	IPLabReader.isThisType(RandomAccessInputStream stream)
boolean	GatanDM2Reader.isThisType(RandomAccessInputStream stream)
boolean	HISReader.isThisType(RandomAccessInputStream stream)
boolean	SIFReader.isThisType(RandomAccessInputStream stream)
boolean	WATOPReader.isThisType(RandomAccessInputStream stream)
boolean	NDPISReader.isThisType(RandomAccessInputStream stream)
boolean	TCSReader.isThisType(RandomAccessInputStream stream)
boolean	ZeissLSMReader.isThisType(RandomAccessInputStream stream)
boolean	OpenlabReader.isThisType(RandomAccessInputStream stream)
boolean	CanonRawReader.isThisType(RandomAccessInputStream stream)
boolean	JPEG2000Reader.isThisType(RandomAccessInputStream stream)
boolean	DicomReader.isThisType(RandomAccessInputStream stream)
boolean	OMEXMLReader.isThisType(RandomAccessInputStream stream)
boolean	BMPReader.isThisType(RandomAccessInputStream stream)
boolean	PCXReader.isThisType(RandomAccessInputStream stream)
boolean	TextReader.isThisType(RandomAccessInputStream stream)
boolean	MicromanagerReader.isThisType(RandomAccessInputStream stream)
boolean	PGMReader.isThisType(RandomAccessInputStream stream)
boolean	MNGReader.isThisType(RandomAccessInputStream stream)
boolean	FlowSightReader.isThisType(RandomAccessInputStream stream)
boolean	AVIReader.isThisType(RandomAccessInputStream stream)
boolean	GIFReader.isThisType(RandomAccessInputStream stream)
boolean	IM3Reader.isThisType(RandomAccessInputStream stream)
boolean	OMETiffReader.isThisType(RandomAccessInputStream stream)
boolean	OBFReader.isThisType(RandomAccessInputStream stream)
boolean	JPEGReader.DefaultJPEGReader.isThisType(RandomAccessInputStream stream)
boolean	NRRDReader.isThisType(RandomAccessInputStream stream)
boolean	APNGReader.isThisType(RandomAccessInputStream stream)
boolean	NativeQTReader.isThisType(RandomAccessInputStream stream)
boolean	MinimalTiffReader.isThisType(RandomAccessInputStream stream)
private void	NativeND2Reader.iterateIn(RandomAccessInputStream in, Long stop) Function for iterating through ND2 metaAttributes
protected String	ZeissZVIReader.parseROIString(RandomAccessInputStream s)
private void	BioRadReader.readLookupTables(RandomAccessInputStream s) Read all lookup tables from the given file into the 'lut' variable.
private void	BioRadReader.readNotes(RandomAccessInputStream s, boolean add) Read all of the note strings from the given file.
byte[]	ZeissCZIReader.SubBlock.readPixelData(RandomAccessInputStream s)
private void	SDTReader.readPixels(byte[] rowBuf, RandomAccessInputStream in, ZipInputStream codec, int skip)
private TiffRational	MetamorphReader.readRational(RandomAccessInputStream s)
private TiffRational	MetamorphReader.readRational(RandomAccessInputStream s, long offset)
private void	CellSensReader.readTags(RandomAccessInputStream vsi, boolean populateMetadata, String tagPrefix)
private long	SDTInfo.readUnsignedLong(RandomAccessInputStream in)

Constructors in loci.formats.in with parameters of type RandomAccessInputStream

Constructor and Description
DeltavisionReader.DVExtHdrFields(RandomAccessInputStream in)
JPEG2000MetadataParser(RandomAccessInputStream in) Constructs a new JPEG2000MetadataParser.
JPEG2000MetadataParser(RandomAccessInputStream in, long maximumReadOffset) Constructs a new JPEG2000MetadataParser.
SDTInfo(RandomAccessInputStream in, Hashtable meta) Constructs a new SDT header by reading values from the given input source, populating the given metadata table.
ZeissCZIReader.AttachmentEntry(RandomAccessInputStream s)
ZeissCZIReader.DimensionEntry(RandomAccessInputStream s)
ZeissCZIReader.DirectoryEntry(RandomAccessInputStream s)

Uses of RandomAccessInputStream in loci.formats.out

Fields in loci.formats.out declared as RandomAccessInputStream

Modifier and Type	Field and Description
protected RandomAccessInputStream	TiffWriter.in Input stream to use when overwriting data.

Uses of RandomAccessInputStream in loci.formats.services

Fields in loci.formats.services declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	JPEGTurboServiceImpl.in
private RandomAccessInputStream	POIServiceImpl.stream

Methods in loci.formats.services that return RandomAccessInputStream

Modifier and Type	Method and Description
RandomAccessInputStream	POIService.getDocumentStream(String file) Retrieve a RandomAccessInputStream corresponding to the given file name.
RandomAccessInputStream	POIServiceImpl.getDocumentStream(String file)

Methods in loci.formats.services with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
void	POIService.initialize(RandomAccessInputStream stream) Construct a new POI filesystem around the given stream.
void	POIServiceImpl.initialize(RandomAccessInputStream s)
void	MetakitServiceImpl.initialize(RandomAccessInputStream file)
void	MetakitService.initialize(RandomAccessInputStream file)
void	JPEGTurboServiceImpl.initialize(RandomAccessInputStream jpeg, int width, int height)
void	JPEGTurboService.initialize(RandomAccessInputStream jpeg, int width, int height)

Uses of RandomAccessInputStream in loci.formats.tiff

Fields in loci.formats.tiff declared as RandomAccessInputStream

Modifier and Type	Field and Description
protected RandomAccessInputStream	TiffParser.in Input source from which to parse TIFF data.
private RandomAccessInputStream	OnDemandLongArray.stream

Methods in loci.formats.tiff that return RandomAccessInputStream

Modifier and Type	Method and Description
RandomAccessInputStream	OnDemandLongArray.getStream()
RandomAccessInputStream	TiffParser.getStream() Gets the stream from which TIFF data is being parsed.

Methods in loci.formats.tiff with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
void	TiffSaver.overwriteComment(RandomAccessInputStream in, Object value) Convenience method for overwriting a file's first ImageDescription.
void	TiffSaver.overwriteIFDValue(RandomAccessInputStream raf, int ifd, int tag, Object value) Surgically overwrites an existing IFD value with the given one.
void	TiffSaver.overwriteLastIFDOffset(RandomAccessInputStream raf)
void	OnDemandLongArray.setStream(RandomAccessInputStream in)

Constructors in loci.formats.tiff with parameters of type RandomAccessInputStream

Constructor and Description
OnDemandLongArray(RandomAccessInputStream in)
TiffParser(RandomAccessInputStream in) Constructs a new TIFF parser from the given input source.

Uses of RandomAccessInputStream in loci.formats.tools

Fields in loci.formats.tools declared as RandomAccessInputStream

Modifier and Type	Field and Description
protected RandomAccessInputStream	AmiraParameters.in

Methods in loci.formats.tools with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
protected void	AmiraParameters.readFile(RandomAccessInputStream inputStream)

Constructors in loci.formats.tools with parameters of type RandomAccessInputStream

Constructor and Description
AmiraParameters(RandomAccessInputStream inputStream)

Uses of RandomAccessInputStream in loci.poi.hpsf

Methods in loci.poi.hpsf that return RandomAccessInputStream

Modifier and Type	Method and Description
RandomAccessInputStream	SpecialPropertySet.toInputStream()
RandomAccessInputStream	MutablePropertySet.toInputStream() Returns the contents of this property set stream as an input stream.

Uses of RandomAccessInputStream in loci.poi.hssf.usermodel

Constructors in loci.poi.hssf.usermodel with parameters of type RandomAccessInputStream

Constructor and Description
HSSFWorkbook(RandomAccessInputStream s)
HSSFWorkbook(RandomAccessInputStream s, boolean preserveNodes) Companion to HSSFWorkbook(POIFSFileSystem), this constructs the POI filesystem around your inputstream.

Uses of RandomAccessInputStream in loci.poi.poifs.eventfilesystem

Fields in loci.poi.poifs.eventfilesystem declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	POIFSReader.stream

Methods in loci.poi.poifs.eventfilesystem with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
void	POIFSReader.read(RandomAccessInputStream stream, int size) Read from an InputStream and process the documents we get

Uses of RandomAccessInputStream in loci.poi.poifs.filesystem

Fields in loci.poi.poifs.filesystem declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	POIFSFileSystem.stream
private RandomAccessInputStream	DocumentInputStream.stream

Methods in loci.poi.poifs.filesystem with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
DocumentEntry	POIFSFileSystem.createDocument(RandomAccessInputStream stream, String name) Create a new document to be added to the root directory
DocumentEntry	DirectoryNode.createDocument(String name, RandomAccessInputStream stream) create a new DocumentEntry
DocumentEntry	DirectoryEntry.createDocument(String name, RandomAccessInputStream stream) create a new DocumentEntry
(package private) void	POIFSDocument.read(byte[] buffer, int offset, RandomAccessInputStream stream) read data from the internal stores

Constructors in loci.poi.poifs.filesystem with parameters of type RandomAccessInputStream

Constructor and Description
DocumentInputStream(DocumentEntry document, RandomAccessInputStream stream) Create an InputStream from the specified DocumentEntry
DocumentInputStream(POIFSDocument document, RandomAccessInputStream stream) Create an InputStream from the specified Document
POIFSDocument(String name, RandomAccessInputStream stream, int size) Constructor
POIFSFileSystem(RandomAccessInputStream stream, int size) Create a POIFSFileSystem from an InputStream

Uses of RandomAccessInputStream in loci.poi.poifs.storage

Fields in loci.poi.poifs.storage declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	RawDataBlock.stream

Methods in loci.poi.poifs.storage with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
static DocumentBlock[]	DocumentBlock.convert(long offset, RandomAccessInputStream stream, int numBytes, int size, int blockSize) convert a single long array into an array of DocumentBlock instances
static void	DocumentBlock.read(DocumentBlock[] blocks, byte[] buffer, int offset, int blockSize, RandomAccessInputStream stream) read data from an array of DocumentBlocks

Constructors in loci.poi.poifs.storage with parameters of type RandomAccessInputStream

Constructor and Description
DocumentBlock(RandomAccessInputStream stream, int size) Create a single instance initialized with data.
RawDataBlock(RandomAccessInputStream stream, int size, long pointer) Constructor RawDataBlock
RawDataBlockList(RandomAccessInputStream stream, int size) Constructor RawDataBlockList

Uses of RandomAccessInputStream in ome.jxr

Constructors in ome.jxr with parameters of type RandomAccessInputStream

Constructor and Description
JXRReader(RandomAccessInputStream stream) Deprecated.

Uses of RandomAccessInputStream in ome.jxr.parser

Fields in ome.jxr.parser declared as RandomAccessInputStream

Modifier and Type	Field and Description
(package private) RandomAccessInputStream	Parser.stream Deprecated.

Constructors in ome.jxr.parser with parameters of type RandomAccessInputStream

Constructor and Description
DatastreamParser(Parser parentParser, RandomAccessInputStream stream) Deprecated.
FileParser(RandomAccessInputStream stream) Deprecated.
IFDParser(Parser parentParser, RandomAccessInputStream stream) Deprecated.
Parser(Parser parentParser, RandomAccessInputStream stream) Deprecated.

Uses of RandomAccessInputStream in ome.metakit

Fields in ome.metakit declared as RandomAccessInputStream

Modifier and Type	Field and Description
private RandomAccessInputStream	ColumnMap.stream
private RandomAccessInputStream	MetakitReader.stream

Methods in ome.metakit with parameters of type RandomAccessInputStream

Modifier and Type	Method and Description
static int	MetakitTools.readBpInt(RandomAccessInputStream stream) Read a byte-packed integer from the given RandomAccessInputStream.
static String	MetakitTools.readPString(RandomAccessInputStream stream) Read a Pascal-style string from the given RandomAccessInputStream.

Constructors in ome.metakit with parameters of type RandomAccessInputStream

Constructor and Description
ColumnMap(Column col, RandomAccessInputStream stream, int rowCount)
MetakitReader(RandomAccessInputStream stream)