Your browser doesn't support the features required by impress.js, so you are presented with a simplified version of this presentation.

For the best experience please use the latest Chrome, Safari or Firefox browser.

How to display OME-Zarr Collections?

Will Moore
#OME2025, Wood's Hole

Thumbnails

OME-Zarr Collections

With pre-generated thumbnails

OME-2024-NGFF-Challenge

Thumbnails generated from OME-Zarr data on the fly

ome-zarr.js

https://github.com/BioNGFF/ome-zarr.js | Demo

ome-zarr.js in action: ome-ngff-validator

Thumbnails from ome-zarr.js

ome-zarr.js in action: OMERO.figure

Rendering OME-Zarr with ome-zarr.js: (PR #619)

How do you view a local collection of OME-Zarr data?

 $ pip install ome-zarr
 $ ome_zarr finder path/to/data/