MIAP OMERO Workshop

Basel, September 2018
Jean-Marie Burel, Petr Walczysko

The CLI is

• an OMERO client
• set of Python-based tools
• tools for users, developers and (restricted) administrators.

Today's workshop

• CLI to import
• CLI to manage users, groups and data

Integration

Client-side vs Server-side analysis

Getting started

Importing Images...

CLI import

# e.g. Transfer file using 'soft' link
$ bin/omero import -- --transfer=ln_s image.lsm