OMERO workshop
Scottish Microscopy Group
Symposium, 22nd Nov 2017
Will Moore
Outline
- Intro: OME
- What is OMERO?
- Workshop: Using OMERO
A typical microscopy workflow
OME: Interoperability
OME: What We Do
OMERO is a server with clients
Other OMERO clients
- OMERO.iviewer
- OMERO.figure
- ImageJ http://help.openmicroscopy.org/imagej.html
- CATMAID github.com/msphan/omero-catmaid/
- Cell Profiler OMERO: Accessing images
- Orbit www.orbit.bio/omero-connection/
OMERO from your own code
- Java
- Python
- Matlab
- C++
- JavaScript
Demo
demo.openmicroscopy.org
Username: demo
Password:
idr.openmicroscopy.org
Thank you
