Uses of Interface
ome.io.nio.PixelBuffer

Packages that use PixelBuffer
ome.io.bioformats   
ome.io.nio New Input/Output handling for the OMERO server This includes interfaces/classes for the input and output handling of data within the OMERO server. 
ome.services.roi   
omeis.providers.re Red-Green-Blue (RGB) data structures and Image Rendering Service This package provides basic data structures to represent an RGB pixel set and provide a service for the rendering of this pixel set. 
omeis.providers.re.data Provides classes needed to define XY planes within a dynamic 3D context. 
omeis.providers.re.metadata   
 

Uses of PixelBuffer in ome.io.bioformats
 

Classes in ome.io.bioformats that implement PixelBuffer
 class BfPixelBuffer
          PixelBuffer implementation which uses Bio-Formats to read pixels data directly from original files.
 class BfPyramidPixelBuffer
          PixelBuffer implementation which uses Bio-Formats to read pixels data directly from original files.
 

Uses of PixelBuffer in ome.io.nio
 

Classes in ome.io.nio that implement PixelBuffer
 class InMemoryPlanarPixelBuffer
          Class implementation of the PixelBuffer interface for in memory planar pixel data.
 class RomioPixelBuffer
          Class implementation of the PixelBuffer interface for standard "proprietary" ROMIO/OMEIS data format.
 

Methods in ome.io.nio that return PixelBuffer
protected  PixelBuffer PixelsService.createBfPixelBuffer(String filePath, int series)
          Helper method to properly log any exceptions raised by Bio-Formats.
 PixelBuffer PixelsService.createPixelBuffer(ome.model.core.Pixels pixels)
          Creates a PixelBuffer for a given pixels set.
protected  PixelBuffer PixelsService.createRomioPixelBuffer(String pixelsFilePath, ome.model.core.Pixels pixels, boolean allowModification)
          Helper method to properlty create a RomioPixelBuffer.
 PixelBuffer PixelsService.getPixelBuffer(ome.model.core.Pixels pixels)
          Deprecated. In the future callers should use the more descriptive PixelsService.getPixelBuffer(Pixels, boolean).
 PixelBuffer PixelsService.getPixelBuffer(ome.model.core.Pixels pixels, boolean write)
          Returns a pixel buffer for a given set of pixels.
 

Methods in ome.io.nio with parameters of type PixelBuffer
static int Utils.forEachTile(TileLoopIteration iteration, PixelBuffer pixelBuffer, int tileWidth, int tileHeight)
          Iterates over every tile in a given pixel buffer based on the over arching dimensions and a requested maximum tile width and height.
 

Uses of PixelBuffer in ome.services.roi
 

Methods in ome.services.roi that return PixelBuffer
 PixelBuffer PixelData.getBuffer(long pix)
           
 

Methods in ome.services.roi with parameters of type PixelBuffer
 double PixelData.get(PixelBuffer buf, int x, int y, int z, int c, int t)
           
 

Uses of PixelBuffer in omeis.providers.re
 

Methods in omeis.providers.re that return PixelBuffer
 PixelBuffer Renderer.getPixels()
          Returns the object that allows to access the pixels raw data.
 

Methods in omeis.providers.re with parameters of type PixelBuffer
 int[] Renderer.renderAsPackedInt(PlaneDef pd, PixelBuffer newBuffer)
          Renders the data selected by pd according to the current rendering settings.
 int[] Renderer.renderAsPackedIntAsRGBA(PlaneDef pd, PixelBuffer newBuffer)
          Renders the data selected by pd according to the current rendering settings.
 

Constructors in omeis.providers.re with parameters of type PixelBuffer
Renderer(QuantumFactory quantumFactory, List<ome.model.enums.RenderingModel> renderingModels, ome.model.core.Pixels pixelsObj, ome.model.display.RenderingDef renderingDefObj, PixelBuffer bufferObj)
          Creates a new instance to render the specified pixels set and get this new instance ready for rendering.
 

Uses of PixelBuffer in omeis.providers.re.data
 

Methods in omeis.providers.re.data with parameters of type PixelBuffer
static Plane2D PlaneFactory.createPlane(PlaneDef planeDef, int channel, ome.model.core.Pixels pixels, PixelBuffer buffer)
          Factory method to fetch plane data and create an object to access it.
 

Uses of PixelBuffer in omeis.providers.re.metadata
 

Methods in omeis.providers.re.metadata with parameters of type PixelBuffer
 void StatsFactory.computeLocationStats(ome.model.core.Pixels metadata, PixelBuffer pixelsData, PlaneDef pd, int index)
          Helper object to determine the location of the pixels' values, the inputWindow i.e.
 



OmeroJava Api

Version: 4.3.4-dbcbce5a-b4

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