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script_run(request,
scriptId)
Runs a script using values in a POST |
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script_form(request,
scriptId)
Generates an html form for the parameters of a defined script. |
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dataset_stack(request,
datasetId)
Downloads a dataset of single-plane images as a .mrc file |
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projection(request,
imageId,
projkey)
Simply add the projkey (intmean, intsum or intmax) to the request and
delegate to webgateway render_image() |
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projection_axis(request,
imageId,
axis,
get_slice=False) |
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mapmodelemdb(request,
entryId)
We need to work out the OMERO imageId for the emd_map for this
entryId, then call mapmodel(). |
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mapmodel(request,
imageId,
entryId=None)
Shows an image projections, slices etc. |
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image(request,
imageId)
Shows an image preview (single plane), Name, Description etc. |
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dataset(request,
datasetId)
Shows the thumbnails in a dataset, provides a link back to EMDB entry
(project) |
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oa_viewer(request,
fileId)
Returns simply the <applet> element of Open Astex Viewer, for
loading into another page. |
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getFile(request,
fileId)
Gets the file by Id and returns it according to mime type for
display. |
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logout(request)
Shouldn't ever be used (public db) |
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index(request)
Show a selection of the latest EMDB entries |
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getSpfFiles(queryService,
rawFileService)
list original files ending with .spf and get text for each, but
provide the annotation ID (same as Insight) returns a list of (id,
name, text) |
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publications(request)
List all the publications, which are stored as CommentAnnotations
with namespace |
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image_viewer(request,
iid,
**kwargs)
This view is responsible for showing pixel data as images |
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