Module cleanse
source code
Reconcile and cleanse where necessary an OMERO data directory of
orphaned data.
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Cleanser
Keeps file cleansing state and performs OMERO database
reconciliation of files within an OMERO binary repository.
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cleanse(data_dir,
query_service,
dry_run=False) |
source code
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main()
Default main() that performs OMERO data directory cleansing. |
source code
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Imports:
getpass,
omero,
sys,
os,
PermissionDeniedException,
getopt,
GetoptError,
S_IWRITE,
ST_MTIME,
S_IRGRP,
SF_NOUNLINK,
S_IFLNK,
ST_INO,
S_IXOTH,
ST_UID,
S_ISSOCK,
UF_NOUNLINK,
S_ISLNK,
S_IMODE,
S_IXUSR,
S_IRUSR,
SF_ARCHIVED,
ST_NLINK,
S_IFBLK,
UF_IMMUTABLE,
S_IFDIR,
ST_ATIME,
S_ISFIFO,
S_ISUID,
UF_OPAQUE,
S_IRWXU,
S_IFCHR,
S_ISGID,
SF_APPEND,
S_IFREG,
S_ISREG,
S_IREAD,
S_IFIFO,
S_IFSOCK,
S_ISCHR,
SF_IMMUTABLE,
S_ISVTX,
ST_MODE,
UF_NODUMP,
S_ISDIR,
S_ENFMT,
S_IEXEC,
ST_CTIME,
S_IWOTH,
S_IXGRP,
S_IRWXG,
S_IFMT,
S_IWUSR,
S_ISBLK,
ST_GID,
S_IROTH,
S_IWGRP,
S_IRWXO,
ST_DEV,
ST_SIZE,
UF_APPEND,
SF_SNAPSHOT
Prints usage so that we don't have to. :)
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SEARCH_DIRECTORIES
- Value:
{'Pixels': 'Pixels', 'Files': 'OriginalFile',}
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