Index


Table: analyses

"analyses" Structure
F-Key Name Type Description
analysis_id OIDNOT NULL PRIMARY KEY default nextval('ANALYSIS_SEQ'::text)
programs program_id OID
datasets dataset_id OID
experimenters experimenter_id OID
timestamp TIMESTAMPdefault "timestamp"('now'::text)
status VARCHAR(16)

Tables referencing this one via Foreign Key Constraints:

Index

Table: attribute_list

"attribute_list" Structure
F-Key Name Type Description
programs program_id OID
table_name VARCHAR(64)
Index

Table: attributes

"attributes" Structure
F-Key Name Type Description
features feature_id OID
analyses analysis_id OID
Index

Table: attributes_dataset_xyzwt

"attributes_dataset_xyzwt" Structure
F-Key Name Type Description
datasets dataset_id OIDUNIQUE
size_x INT4
size_y INT4
size_z INT4
num_waves INT4
num_times INT4
pixel_size_x FLOAT4
pixel_size_y FLOAT4
pixel_size_z FLOAT4
wave_increment FLOAT4
time_increment FLOAT4
Index

Table: binary_image

"binary_image" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
dataset_type VARCHAR(32)
dataset_id_in OID
dataset_id_bin OID
name VARCHAR(256)
path VARCHAR(256)
Index

Table: cluster_f

"cluster_f" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
cluster_id OID
Index

Table: dataset_display_settings

"dataset_display_settings" Structure
F-Key Name Type Description
dataset_display_settings_id OIDNOT NULL PRIMARY KEY default nextval('DATASET_DISPLAY_SETTINGS_SEQ'::text)
url TEXT

Tables referencing this one via Foreign Key Constraints:

Index

Table: dataset_files_xyzwt

"dataset_files_xyzwt" Structure
F-Key Name Type Description
datasets dataset_id OID
file_sha1 CHAR(40)
bigendian BOOL
path VARCHAR(256)
host VARCHAR(256)
url VARCHAR(256)
x_start INT2
x_stop INT2
y_start INT2
y_stop INT2
z_start INT2
z_stop INT2
w_start INT2
w_stop INT2
t_start INT2
t_stop INT2
Index

Table: dataset_screen_info

"dataset_screen_info" Structure
F-Key Name Type Description
datasets dataset_id OIDUNIQUE
plates plate_id OID
well VARCHAR(8)
sample INT4
extern_sample_id VARCHAR(40)
Index

Table: dataset_stage_info

"dataset_stage_info" Structure
F-Key Name Type Description
datasets dataset_id OIDUNIQUE
label TEXT
stage_x FLOAT8
stage_y FLOAT8
stage_z FLOAT8
Index

Table: dataset_types

"dataset_types" Structure
F-Key Name Type Description
dataset_type OIDNOT NULL PRIMARY KEY default nextval('DATASET_TYPE_SEQ'::text)
type_name VARCHAR(64)
implementation_lang VARCHAR(32)
classpath VARCHAR(255)
attributes_table VARCHAR(64)

Tables referencing this one via Foreign Key Constraints:

Index

Table: dataset_wavelengths

"dataset_wavelengths" Structure
F-Key Name Type Description
datasets dataset_id OID
wavenumber INT4
ex_wavelength INT4
em_wavelength INT4
nd_filter FLOAT8
Index

Table: datasets

"datasets" Structure
F-Key Name Type Description
dataset_id OIDNOT NULL PRIMARY KEY default nextval('DATASET_SEQ'::text)
dataset_guid CHAR(40)
name VARCHAR(256)
dataset_display_settings display_settings OID
description TEXT
instruments instrument_id OID
experimenters experimenter_id OID
groups group_id OID
created TIMESTAMP
inserted TIMESTAMP
dataset_types dataset_type OID
bits_per_pixel INT2

Tables referencing this one via Foreign Key Constraints:

Index

Table: datasets_projects

"datasets_projects" Structure
F-Key Name Type Description
projects project_id OID
datasets dataset_id OID

"datasets_projects" Constraints
Name Constraint
datasets_projects_unique
UNIQUE (project_id, dataset_id)
Index

Table: delta

"delta" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
moved_to OID
delta_x FLOAT8
delta_y FLOAT8
delta_z FLOAT8
distance FLOAT8
velocity FLOAT8
trajectory_id OID
Index

Table: distance_to_spindle_axis

"distance_to_spindle_axis" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
distance FLOAT8
length FLOAT8
Index

Table: envelope

"envelope" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
x INT2
y INT2
z INT2
Index

Table: experimenters

"experimenters" Structure
F-Key Name Type Description
experimenter_id OIDNOT NULL PRIMARY KEY default nextval('EXPERIMENTER_SEQ'::text)
ome_name VARCHAR(30)
firstname VARCHAR(30)
lastname VARCHAR(30)
email VARCHAR(50)
groups group_id OID

Tables referencing this one via Foreign Key Constraints:

Index

Table: expired_files

"expired_files" Structure
F-Key Name Type Description
fullpath VARCHAR(255)
Index

Table: extent

"extent" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
volume INT4
min_x INT2
min_y INT2
min_z INT2
max_x INT2
max_y INT2
max_z INT2
sigma_x FLOAT8
sigma_y FLOAT8
sigma_z FLOAT8
surface_area FLOAT8
perimiter FLOAT8
form_factor FLOAT8
Index

Table: features

"features" Structure
F-Key Name Type Description
feature_id OIDNOT NULL PRIMARY KEY default nextval('FEATURE_SEQ'::text)
analyses analysis_id OID

Tables referencing this one via Foreign Key Constraints:

Index

Table: groups

"groups" Structure
F-Key Name Type Description
group_id OIDNOT NULL PRIMARY KEY default nextval('GROUP_SEQ'::text)
name VARCHAR(30)
experimenters leader OID
experimenters contact OID

Tables referencing this one via Foreign Key Constraints:

Index

Table: input_binarize_global

"input_binarize_global" Structure
F-Key Name Type Description
analyses analysis_id OID
method VARCHAR(32)
argument VARCHAR(32)
make_binary BOOL
wavelength INT4
Index

Table: input_findspots

"input_findspots" Structure
F-Key Name Type Description
analyses analysis_id OID
time_start INT4
time_stop INT4
wavelength INT4
threshold VARCHAR(16)
min_spot_vol INT4
Index

Table: input_getnearestneighbors

"input_getnearestneighbors" Structure
F-Key Name Type Description
analyses analysis_id OID
Index

Table: input_trackspots

"input_trackspots" Structure
F-Key Name Type Description
analyses analysis_id OID
time_start INT4
time_stop INT4
wavelength INT4
threshold VARCHAR(16)
min_spot_vol INT4
intens_weight FLOAT8
Index

Table: input_trackspots2

"input_trackspots2" Structure
F-Key Name Type Description
analyses analysis_id OID
intens_weight FLOAT8
Index

Table: instruments

"instruments" Structure
F-Key Name Type Description
instrument_id OIDNOT NULL PRIMARY KEY default nextval('INSTRUMENT_SEQ'::text)
name VARCHAR(30)
description TEXT

Tables referencing this one via Foreign Key Constraints:

Index

Table: location

"location" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
x FLOAT8
y FLOAT8
z FLOAT8
Index

Table: nearest_neighbor

"nearest_neighbor" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
feature_id OID
delta_x FLOAT8
delta_y FLOAT8
delta_z FLOAT8
distance FLOAT8
Index

Table: ome_sessions

"ome_sessions" Structure
F-Key Name Type Description
session_id OIDNOT NULL PRIMARY KEY default nextval('SESSION_SEQ'::text)
session_key VARCHAR(36)
ome_name VARCHAR(30)
host VARCHAR(30)
projects project_id OID
dataset_view TEXT
feature_view TEXT
analysis VARCHAR(64)
dataset_display_settings display_settings OID
last_access TIMESTAMPdefault "timestamp"('now'::text)
started TIMESTAMPdefault "timestamp"('now'::text)

Tables referencing this one via Foreign Key Constraints:

Index

Table: ome_sessions_datasets

"ome_sessions_datasets" Structure
F-Key Name Type Description
datasets dataset_id OID
ome_sessions session_id OID
Index

Table: plates

"plates" Structure
F-Key Name Type Description
plate_id OIDNOT NULL PRIMARY KEY default nextval('PLATE_SEQ'::text)
name VARCHAR(255)
extern_plate_id VARCHAR(40)

Tables referencing this one via Foreign Key Constraints:

Index

Table: programs

"programs" Structure
F-Key Name Type Description
program_id OIDNOT NULL PRIMARY KEY default nextval('PROGRAM_SEQ'::text)
program_name VARCHAR(64)
path VARCHAR(64)
description TEXT
category VARCHAR(32)
input_table VARCHAR(64)

Tables referencing this one via Foreign Key Constraints:

Index

Table: projects

"projects" Structure
F-Key Name Type Description
project_id OIDNOT NULL PRIMARY KEY default nextval('PROJECT_SEQ'::text)
name VARCHAR(64)
experimenters owner_id OID
groups group_id OID
view VARCHAR(64)
description TEXT

Tables referencing this one via Foreign Key Constraints:

Index

Table: screen_plates

"screen_plates" Structure
F-Key Name Type Description
plates plate_id OID
screens screen_id OID
Index

Table: screens

"screens" Structure
F-Key Name Type Description
screen_id OIDNOT NULL PRIMARY KEY default nextval('SCREEN_SEQ'::text)
name VARCHAR(255)
description TEXT
extern_screen_id VARCHAR(40)

Tables referencing this one via Foreign Key Constraints:

Index

Table: signal

"signal" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
wavelength INT2
centroid_x FLOAT8
centroid_y FLOAT8
centroid_z FLOAT8
integral FLOAT8
mean FLOAT8
geomean FLOAT8
sigma FLOAT8
sd_over_mean FLOAT8
sd_over_geomean FLOAT8
background FLOAT8
Index

Table: threshold

"threshold" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
threshold INT2
Index

Table: timepoint

"timepoint" Structure
F-Key Name Type Description
features attribute_of OID
analyses analysis_id OID
timepoint INT4
Index

Table: view_templates

"view_templates" Structure
F-Key Name Type Description
name VARCHAR(32)
description TEXT
template TEXT
type VARCHAR(32)
experimenters owner_id OID
groups group_id OID
Index

Table: xy_dataset_info

"xy_dataset_info" Structure
F-Key Name Type Description
datasets dataset_id OID
wavenumber INT4
timepoint INT4
zsection INT4
deltatime FLOAT8
exptime FLOAT8
stage_x FLOAT8
stage_y FLOAT8
stage_z FLOAT8
min INT4
max INT4
mean FLOAT4
geomean FLOAT4
sigma FLOAT4
Index

Table: xy_softworx_info

"xy_softworx_info" Structure
F-Key Name Type Description
datasets dataset_id OID
wavenumber INT4
timepoint INT4
zsection INT4
photosensor_reading FLOAT8
inten_scaling FLOAT8
Index

Table: xyz_dataset_info

"xyz_dataset_info" Structure
F-Key Name Type Description
datasets dataset_id OID
wavenumber INT4
timepoint INT4
deltatime FLOAT8
min INT4
max INT4
mean FLOAT4
geomean FLOAT4
sigma FLOAT4
centroid_x FLOAT4
centroid_y FLOAT4
centroid_z FLOAT4
Index