OME Documentation Center
API Documentation
OME Database Schema FC - Final Candidate
SQL DDL:
000-DataTypes.sql
000-OMECore.sql
010-Analysis.sql
Documentation and Reference:
HTML Schema Docs
Note that the majority of the tables in this schema are loaded from XML (e.g.
OMECoreTypes.ome) and not from the DDL above.
OME XML Schema v 2.0a FC - Final Candidate
XML Schema Definition (XSD) and Target Namespace:
http://www.openmicroscopy.org/XMLschemas/OME/FC/ome.xsd
Documentation and Reference:
http://www.openmicroscopy.org/XMLschemas/OME/FC/ome_xsd/index.html
Example XML Document: Sample.ome
Shared Schemas
XML Schema Definition (XSD) and Target Namespace:
Binary File (RC1):
http://openmicroscopy.org/XMLschemas/BinaryFile/RC1/BinaryFile.xsd
Semantic Type Definitions (RC2):
http://openmicroscopy.org/XMLschemas/STD/RC2/STD.xsd
Example XML documents:
Note, some browsers will not display as plain text. These schemas may be validated at http://www.w3.org/2001/03/webdata/xsv.
Semantic Type Definitions (RC2):
OMECoreTypes.ome
Documentation and Reference:
Binary File (RC1):
http://openmicroscopy.org/XMLschemas/BinaryFile/RC1/BinaryFile_xsd/
Semantic Type Definitions (RC2):
http://openmicroscopy.org/XMLschemas/STD/RC2/STD_xsd/
XML Analysis Module Schemas
XML Schema Definitions (XSD) and Target Namespaces:
Analysis Module (RC1):
http://www.openmicroscopy.org/XMLschemas/AnalysisModule/RC1/AnalysisModule.xsd
CLI (RC1):
http://www.openmicroscopy.org/XMLschemas/CLI/RC1/CLI.xsd
Example XML documents:
Note, some browsers will not display as plain text. These schemas may be validated at http://www.w3.org/2001/03/webdata/xsv.
Cross Correlation (demonstrates use of planes, uses both schemas):
ome_cccp.xml
Documentation and Reference:
Analysis Module (RC1):
http://www.openmicroscopy.org/XMLschemas/AnalysisModule/RC1/AnalysisModule_xsd/
CLI (RC1):
http://www.openmicroscopy.org/XMLschemas/CLI/RC1/CLI_xsd/