ome-xml  5.5.0
Experiment.h
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38 
39 /*─────────────────────────────────────────────────────────────────────────────
40  *
41  * THIS IS AUTOMATICALLY GENERATED CODE. DO NOT MODIFY.
42  *
43  *─────────────────────────────────────────────────────────────────────────────
44  */
45 
46 #ifndef OME_XML_MODEL_EXPERIMENT_H
47 #define OME_XML_MODEL_EXPERIMENT_H
48 
49 #include <algorithm>
50 #include <list>
51 #include <stdexcept>
52 #include <string>
53 #include <vector>
54 
55 #include <ome/common/log.h>
56 
57 #include <ome/common/xml/dom/Document.h>
58 #include <ome/common/xml/dom/Element.h>
59 #include <ome/common/xml/dom/Node.h>
60 
61 #include <ome/xml/model/primitives/Quantity.h>
62 
63 #include <ome/xml/model/Experimenter.h>
64 #include <ome/xml/model/detail/OMEModelObject.h>
65 #include <ome/xml/model/enums/ExperimentType.h>
66 
67 namespace ome
68 {
69  namespace xml
70  {
71  namespace model
72  {
73 
74  // Forward declarations.
75  class Image;
76  class MicrobeamManipulation;
77  class OMEModel;
78 
83  {
84  private:
85  class Impl;
87  std::shared_ptr<Impl> impl;
88 
89  public:
91  Experiment();
92 
98  Experiment (const Experiment& copy);
99 
101  virtual
102  ~Experiment ();
103 
118  static std::shared_ptr<Experiment>
119  create(const common::xml::dom::Element& element,
121 
122  // Documented in superclass.
123  const std::string&
124  elementName() const;
125 
126  // Documented in superclass.
127  bool
128  validElementName(const std::string& name) const;
129 
130  private:
132  Experiment&
133  operator= (const Experiment&);
134 
135  public:
136  // -- OMEModelObject API methods --
137 
139  virtual void
140  update(const common::xml::dom::Element& element,
142 
143  public:
144  // -- Experiment API methods --
145 
147  bool
148  link (std::shared_ptr<Reference>& reference,
149  std::shared_ptr<ome::xml::model::OMEModelObject>& object);
150 
156  std::shared_ptr<ome::xml::model::enums::ExperimentType>
157  getType ();
158 
164  const std::shared_ptr<ome::xml::model::enums::ExperimentType>
165  getType () const;
166 
172  void
173  setType (std::shared_ptr<ome::xml::model::enums::ExperimentType>& type);
174 
180  const std::string&
181  getID () const;
182 
188  void
189  setID (const std::string& id);
190 
196  std::shared_ptr<std::string>
197  getDescription ();
198 
204  const std::shared_ptr<std::string>
205  getDescription () const;
206 
212  void
213  setDescription (std::shared_ptr<std::string>& description);
214 
221  std::weak_ptr<ome::xml::model::Experimenter>
223 
230  const std::weak_ptr<ome::xml::model::Experimenter>
231  getLinkedExperimenter () const;
232 
238  void
239  linkExperimenter (std::shared_ptr<ome::xml::model::Experimenter>& experimenter);
240 
250  void
251  unlinkExperimenter (std::shared_ptr<ome::xml::model::Experimenter>& experimenter);
252 
258  std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type
260 
267  std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>&
269 
276  const std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>&
278 
286  std::shared_ptr<ome::xml::model::MicrobeamManipulation>&
287  getMicrobeamManipulation (std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type index);
288 
296  const std::shared_ptr<ome::xml::model::MicrobeamManipulation>&
297  getMicrobeamManipulation (std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type index) const;
298 
306  void
307  setMicrobeamManipulation (std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type index,
308  std::shared_ptr<ome::xml::model::MicrobeamManipulation>& microbeamManipulation);
309 
318  void
319  addMicrobeamManipulation (std::shared_ptr<ome::xml::model::MicrobeamManipulation>& microbeamManipulation);
320 
330  void
331  removeMicrobeamManipulation (std::shared_ptr<ome::xml::model::MicrobeamManipulation>& microbeamManipulation);
332 
339  sizeOfLinkedImageList () const;
340 
347  getLinkedImageList () const;
348 
356  const std::weak_ptr<ome::xml::model::Image>&
358 
369  const std::weak_ptr<ome::xml::model::Image>&
371  const std::shared_ptr<ome::xml::model::Image>& image_BackReference);
372 
383  bool
384  linkImage (const std::shared_ptr<ome::xml::model::Image>& image_BackReference);
385 
401  bool
402  unlinkImage (const std::shared_ptr<ome::xml::model::Image>& image_BackReference);
403 
404  protected:
405  // Documented in base class.
406  virtual void
408  common::xml::dom::Element& element) const;
409 
410  public:
411  // Documented in superclass.
412  const std::string&
413  getXMLNamespace() const;
414  };
415 
416  }
417  }
418 }
419 
420 #endif // OME_XML_MODEL_EXPERIMENT_H
421 
422 /*
423  * Local Variables:
424  * mode:C++
425  * End:
426  */
OME model interface (abstract top-level container)
Definition: OMEModel.h:61
std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation > > & getMicrobeamManipulationList()
Get the MicrobeamManipulation list.
Definition: Experiment.cpp:384
void setDescription(std::shared_ptr< std::string > &description)
Set the Description property.
Definition: Experiment.cpp:342
std::shared_ptr< ome::xml::model::enums::ExperimentType > getType()
Get the Type property.
Definition: Experiment.cpp:293
virtual void update(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Update the object hierarchy recursively from an XML DOM tree.
Definition: Experiment.cpp:197
const std::string & getID() const
Get the ID property.
Definition: Experiment.cpp:314
std::weak_ptr< ome::xml::model::Experimenter > getLinkedExperimenter()
Get linked Experimenter.
Definition: Experiment.cpp:349
bool link(std::shared_ptr< Reference > &reference, std::shared_ptr< ome::xml::model::OMEModelObject > &object)
Link a given OME model object to this model object.
Definition: Experiment.cpp:267
const std::string & getXMLNamespace() const
Get the XML namespace for this model object.
Definition: Experiment.cpp:568
boost::multi_index_container< Ptr< T >, boost::multi_index::indexed_by< boost::multi_index::random_access<>, boost::multi_index::ordered_unique< boost::multi_index::identity< Ptr< T > >, std::owner_less< Ptr< T > > > > > type
Multi-index container type.
Definition: OMEModelObject.h:93
const std::weak_ptr< ome::xml::model::Image > & setLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type index, const std::shared_ptr< ome::xml::model::Image > &image_BackReference)
Set linked Image.
Definition: Experiment.cpp:454
OME model object (concrete implementation).
Definition: OMEModelObject.h:64
void addMicrobeamManipulation(std::shared_ptr< ome::xml::model::MicrobeamManipulation > &microbeamManipulation)
Add MicrobeamManipulation.
Definition: Experiment.cpp:417
Experiment model object.
Definition: Experiment.h:82
Multi-index container for efficient ordered insertion and deletion of model object references...
Definition: OMEModelObject.h:84
bool linkImage(const std::shared_ptr< ome::xml::model::Image > &image_BackReference)
Link Image.
Definition: Experiment.cpp:464
void setID(const std::string &id)
Set the ID property.
Definition: Experiment.cpp:321
void setType(std::shared_ptr< ome::xml::model::enums::ExperimentType > &type)
Set the Type property.
Definition: Experiment.cpp:307
Open Microscopy Environment C++ implementation.
Private implementation details of Experiment model object.
Definition: Experiment.cpp:81
const std::weak_ptr< ome::xml::model::Image > & getLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type index) const
Get linked Image.
Definition: Experiment.cpp:448
void unlinkExperimenter(std::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Unlink Experimenter.
Definition: Experiment.cpp:368
void setMicrobeamManipulation(std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation >>::size_type index, std::shared_ptr< ome::xml::model::MicrobeamManipulation > &microbeamManipulation)
Set MicrobeamManipulation.
Definition: Experiment.cpp:408
bool unlinkImage(const std::shared_ptr< ome::xml::model::Image > &image_BackReference)
Unlink Image.
Definition: Experiment.cpp:477
Experiment & operator=(const Experiment &)
Assignment operator (deleted).
std::shared_ptr< std::string > getDescription()
Get the Description property.
Definition: Experiment.cpp:328
Experiment()
Default constructor.
Definition: Experiment.cpp:155
static std::shared_ptr< Experiment > create(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Create a Experiment model object from DOM element.
Definition: Experiment.cpp:175
bool validElementName(const std::string &name) const
Check if a given element name is valid for processing by this model object.
Definition: Experiment.cpp:191
OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type sizeOfLinkedImageList() const
Get size of linked Image list.
Definition: Experiment.cpp:436
virtual ~Experiment()
Destructor.
Definition: Experiment.cpp:170
std::shared_ptr< Impl > impl
Private implementation details.
Definition: Experiment.h:85
void removeMicrobeamManipulation(std::shared_ptr< ome::xml::model::MicrobeamManipulation > &microbeamManipulation)
Remove MicrobeamManipulation.
Definition: Experiment.cpp:425
OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type getLinkedImageList() const
Get the linked Image list.
Definition: Experiment.cpp:442
void linkExperimenter(std::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Link Experimenter.
Definition: Experiment.cpp:362
std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation > >::size_type sizeOfMicrobeamManipulationList() const
Get size of linked MicrobeamManipulation list.
Definition: Experiment.cpp:378
virtual void asXMLElementInternal(common::xml::dom::Document &document, common::xml::dom::Element &element) const
Transform the object hierarchy rooted at this element to XML.
Definition: Experiment.cpp:493
std::shared_ptr< ome::xml::model::MicrobeamManipulation > & getMicrobeamManipulation(std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation >>::size_type index)
Get MicrobeamManipulation.
Definition: Experiment.cpp:396
const std::string & elementName() const
Get the element name of this model object.
Definition: Experiment.cpp:184