ome-files  0.2.3
FormatHandler.h
1 /*
2  * #%L
3  * OME-FILES C++ library for image IO.
4  * Copyright © 2006 - 2015 Open Microscopy Environment:
5  * - Massachusetts Institute of Technology
6  * - National Institutes of Health
7  * - University of Dundee
8  * - Board of Regents of the University of Wisconsin-Madison
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37 
38 #ifndef OME_FILES_FORMATHANDLER_H
39 #define OME_FILES_FORMATHANDLER_H
40 
41 #include <algorithm>
42 #include <iterator>
43 #include <stdexcept>
44 #include <string>
45 #include <vector>
46 
47 #include <boost/filesystem/path.hpp>
48 #include <boost/format.hpp>
49 #include <boost/optional.hpp>
50 #include <boost/version.hpp>
51 
52 namespace ome
53 {
54  namespace files
55  {
56 
64  {
65  protected:
68  {}
69 
70  private:
73 
76  operator= (const FormatHandler&);
77 
78  public:
80  virtual
82  {}
83 
98  virtual
99  bool
100  isThisType(const boost::filesystem::path& name,
101  bool open = true) const = 0;
102 
108  virtual
109  const std::string&
110  getFormat() const = 0;
111 
117  virtual
118  const std::string&
119  getFormatDescription() const = 0;
120 
126  virtual
127  const std::vector<boost::filesystem::path>&
128  getSuffixes() const = 0;
129 
135  virtual
136  const std::vector<boost::filesystem::path>&
137  getCompressionSuffixes() const = 0;
138 
147  virtual void
148  setId(const boost::filesystem::path& id) = 0;
149 
169  virtual
170  void
171  close(bool fileOnly = false) = 0;
172 
173  // -- Utility methods --
174 
183  static bool
184  checkSuffix(const boost::filesystem::path& name,
185  const boost::filesystem::path& suffix)
186  {
187  bool match = true;
188 
189  boost::filesystem::path filename(name);
190 #if !defined(BOOST_VERSION) || BOOST_VERSION >= 105000 // Boost >= 1.50
191  boost::filesystem::path ext;
192  ext.replace_extension(suffix); // Adds leading dot if missing
193 #else // Boost < 1.50
194  // replace_extension doesn't work nicely with older Boost versions.
195  boost::filesystem::path ext(suffix);
196  std::string suffixString(ext.string());
197  if (!suffixString.empty() && suffixString[0] != '.')
198  ext = boost::filesystem::path(std::string(".") + suffixString);
199 #endif // Boost version
200 
201  while(true)
202  {
203  boost::filesystem::path filename_ext = filename.extension();
204  boost::filesystem::path current_ext = ext.extension();
205  filename.replace_extension();
206  ext.replace_extension();
207 
208  if (filename_ext.empty() && current_ext.empty())
209  break; // End of matches
210  else if (!filename_ext.empty() && !current_ext.empty() &&
211  filename_ext == current_ext) // Match OK
212  continue;
213 
214  // Unbalanced or unequal extensions.
215  match = false;
216  break;
217  }
218 
219  return match;
220  }
221 
230  static bool
231  checkSuffix(const boost::filesystem::path& name,
232  const std::vector<boost::filesystem::path>& suffixes)
233  {
234  for (std::vector<boost::filesystem::path>::const_iterator si = suffixes.begin();
235  si != suffixes.end();
236  ++si)
237  {
238  if (checkSuffix(name, *si))
239  return true;
240  }
241 
242  return false;
243  }
244 
254  static bool
255  checkSuffix(const boost::filesystem::path& name,
256  const std::vector<boost::filesystem::path>& suffixes,
257  const std::vector<boost::filesystem::path>& compression_suffixes)
258  {
259  if (checkSuffix(name, suffixes))
260  return true;
261 
262  for (std::vector<boost::filesystem::path>::const_iterator csi = compression_suffixes.begin();
263  csi != compression_suffixes.end();
264  ++csi)
265  {
266  for (std::vector<boost::filesystem::path>::const_iterator si = suffixes.begin();
267  si != suffixes.end();
268  ++si)
269  {
270 #if !defined(BOOST_VERSION) || BOOST_VERSION >= 105000 // Boost >= 1.50
271  boost::filesystem::path suffix(*si);
272  suffix += boost::filesystem::path(".");
273  suffix += *csi;
274 #else // Boost < 1.50
275  boost::filesystem::path suffix(si->parent_path());
276  suffix /= boost::filesystem::path(si->filename().string() + "." + csi->string());
277 #endif // Boost version
278 
279  if (checkSuffix(name, suffix))
280  return true;
281  }
282  }
283  return false;
284  }
285 
297  static void
298  assertId(const boost::optional<boost::filesystem::path>& id,
299  bool notNull = true)
300  {
301  if (!id && notNull)
302  {
303  throw std::logic_error("Current file should not be null; call setId() first");
304  }
305  else if (id && !notNull)
306  {
307  boost::format fmt("Current file should be null, but is '%1%'; call close() first");
308  fmt % id.get();
309  throw std::logic_error(fmt.str());
310  }
311  }
312  };
313 
314 
315  }
316 }
317 
318 #endif // OME_FILES_FORMATHANDLER_H
319 
320 /*
321  * Local Variables:
322  * mode:C++
323  * End:
324  */
325 
virtual bool isThisType(const boost::filesystem::path &name, bool open=true) const =0
Check if the given file is a valid instance of this file format.
static bool checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes)
Perform suffix matching for the given filename.
Definition: FormatHandler.h:255
virtual void setId(const boost::filesystem::path &id)=0
Set the current file name.
Open Microscopy Environment C++.
virtual void close(bool fileOnly=false)=0
Close the currently open file.
FormatHandler & operator=(const FormatHandler &)
Assignment operator (deleted).
FormatHandler()
Constructor.
Definition: FormatHandler.h:67
virtual const std::vector< boost::filesystem::path > & getCompressionSuffixes() const =0
Get the default compression suffixes for this file format.
static bool checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes)
Perform suffix matching for the given filename.
Definition: FormatHandler.h:231
virtual ~FormatHandler()
Destructor.
Definition: FormatHandler.h:81
virtual const std::string & getFormatDescription() const =0
Get the description of this file format.
static void assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true)
Assert that the current file is valid.
Definition: FormatHandler.h:298
static bool checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix)
Perform suffix matching for the given filename.
Definition: FormatHandler.h:184
virtual const std::vector< boost::filesystem::path > & getSuffixes() const =0
Get the default file suffixes for this file format.
Interface for all biological file format readers and writers.
Definition: FormatHandler.h:63
virtual const std::string & getFormat() const =0
Get the name of this file format.